Variant report

Variant nsv900851
Chromosome Location chr13:89797903-89941209
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:89813800-89816000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr13:89815000-89815600 Active TSS Placenta Placenta
3 chr13:89815200-89815800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr13:89822000-89822600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr13:89822200-89822600 Enhancers Adipose Nuclei Adipose
6 chr13:89822200-89822600 Enhancers Fetal Heart heart
7 chr13:89850800-89851200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr13:89850800-89851400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr13:89850800-89851400 Enhancers HMEC breast
10 chr13:89850800-89851400 Enhancers NHEK skin
11 chr13:89850800-89852400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr13:89851200-89852200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr13:89851400-89851800 Flanking Active TSS NHEK skin
14 chr13:89851400-89852000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr13:89851800-89852800 Enhancers NHEK skin
16 chr13:89852000-89852200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr13:89852200-89852800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr13:89852800-89857200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr13:89857200-89858000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr13:89858000-89858600 Enhancers HUES48 Cell Line embryonic stem cell
21 chr13:89858000-89858600 Enhancers Fetal Lung lung
22 chr13:89858200-89858600 Enhancers HUES6 Cell Line embryonic stem cell
23 chr13:89860400-89861200 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr13:89865800-89867600 Enhancers Fetal Lung lung
25 chr13:89866600-89867600 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr13:89873400-89875000 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr13:89875000-89890600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr13:89879600-89880000 Enhancers Muscle Satellite Cultured Cells --
29 chr13:89885000-89902400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr13:89890600-89892200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr13:89890800-89891800 Enhancers HMEC breast
32 chr13:89890800-89891800 Enhancers NHEK skin
33 chr13:89895400-89896000 Enhancers iPS-20b Cell Line embryonic stem cell
34 chr13:89898200-89898600 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr13:89898200-89898600 Enhancers Stomach Mucosa stomach
36 chr13:89898600-89899600 Weak transcription Stomach Mucosa stomach
37 chr13:89899600-89899800 Enhancers Stomach Mucosa stomach
38 chr13:89908000-89909000 Enhancers Fetal Heart heart
39 chr13:89919800-89920400 Enhancers Placenta Amnion Placenta Amnion
40 chr13:89920000-89920400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr13:89920000-89920400 Enhancers HMEC breast
42 chr13:89920200-89920400 Enhancers Muscle Satellite Cultured Cells --
43 chr13:89920200-89920600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr13:89920200-89920600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr13:89920600-89921600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr13:89921800-89922200 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr13:89922200-89922400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr13:89929200-89929400 Enhancers Rectal Smooth Muscle rectum
49 chr13:89931200-89932800 Enhancers Fetal Heart heart
50 chr13:89931600-89931800 Enhancers Rectal Smooth Muscle rectum

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