Variant report

Variant	nsv901588
Chromosome Location	chr14:31595666-31639111
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:401)
CpG islands
(count:61)
Chromatin interactive
region (count:20)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:401 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:31596940-31597257	HepG2	liver:	n/a	n/a
2	ARID3A	chr14:31633342-31633560	HepG2	liver:	n/a	n/a
3	BCL3	chr14:31632146-31632372	GM12878	blood:	n/a	n/a
4	BHLHE40	chr14:31596986-31597291	GM12878	blood:	n/a	n/a
5	CEBPB	chr14:31623945-31624537	A549	lung:	n/a	n/a
6	CEBPB	chr14:31635005-31635235	HepG2	liver:	n/a	chr14:31635107-31635118
7	CEBPB	chr14:31634868-31635281	ECC-1	luminal epithelium:	n/a	chr14:31635107-31635118
8	CEBPB	chr14:31607526-31607846	MCF-7	breast:	n/a	chr14:31607662-31607673 chr14:31607660-31607671 chr14:31607660-31607673 chr14:31607660-31607673
9	CEBPB	chr14:31596955-31597258	HepG2	liver:	n/a	n/a
10	CEBPB	chr14:31624137-31624509	A549	lung:	n/a	n/a
11	CEBPB	chr14:31607490-31607827	HepG2	liver:	n/a	chr14:31607662-31607673 chr14:31607660-31607671 chr14:31607660-31607673 chr14:31607660-31607673
12	CEBPB	chr14:31611571-31612110	ECC-1	luminal epithelium:	n/a	n/a
13	CEBPB	chr14:31634879-31635310	ECC-1	luminal epithelium:	n/a	chr14:31635107-31635118
14	CEBPB	chr14:31607643-31607735	H1-hESC	embryonic stem cell:	n/a	chr14:31607662-31607673 chr14:31607660-31607671 chr14:31607660-31607673 chr14:31607660-31607673
15	CEBPB	chr14:31607491-31607810	Hela-S3	cervix:	n/a	chr14:31607662-31607673 chr14:31607660-31607671 chr14:31607660-31607673 chr14:31607660-31607673
16	CEBPB	chr14:31634854-31635397	A549	lung:	n/a	chr14:31635107-31635118
17	CEBPB	chr14:31634613-31635851	HCT-116	colon:	n/a	chr14:31635107-31635118
18	CEBPB	chr14:31634753-31635465	HCT-116	colon:	n/a	chr14:31635107-31635118
19	CEBPB	chr14:31633308-31633739	MCF-7	breast:	n/a	n/a
20	CEBPB	chr14:31634945-31635755	Hela-S3	cervix:	n/a	chr14:31635107-31635118
21	CEBPB	chr14:31634845-31635280	MCF-7	breast:	n/a	chr14:31635107-31635118
22	CEBPB	chr14:31634822-31635255	A549	lung:	n/a	chr14:31635107-31635118
23	CEBPB	chr14:31634771-31635421	MCF-7	breast:	n/a	chr14:31635107-31635118
24	CEBPB	chr14:31624136-31624491	A549	lung:	n/a	n/a
25	CEBPB	chr14:31635039-31635199	K562	blood:	n/a	chr14:31635107-31635118
26	CEBPB	chr14:31634821-31635770	IMR90	lung:	n/a	chr14:31635107-31635118
27	CEBPB	chr14:31606528-31606850	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr14:31607533-31607760	A549	lung:	n/a	chr14:31607662-31607673 chr14:31607660-31607671 chr14:31607660-31607673 chr14:31607660-31607673
29	CEBPB	chr14:31607499-31607843	IMR90	lung:	n/a	chr14:31607662-31607673 chr14:31607660-31607671 chr14:31607660-31607673 chr14:31607660-31607673
30	CEBPB	chr14:31635007-31635232	HepG2	liver:	n/a	chr14:31635107-31635118
31	CEBPB	chr14:31606554-31607023	HCT-116	colon:	n/a	n/a
32	CEBPB	chr14:31634680-31635800	A549	lung:	n/a	chr14:31635107-31635118
33	CEBPD	chr14:31620077-31620399	K562	blood:	n/a	n/a
34	CHD2	chr14:31635001-31635211	Hela-S3	cervix:	n/a	n/a
35	CHD2	chr14:31596960-31597338	GM12878	blood:	n/a	n/a
36	CTCF	chr14:31615891-31615960	Kidney_OC	kidney:	n/a	n/a
37	CTCF	chr14:31604100-31604250	NB4	blood:	n/a	n/a
38	CTCF	chr14:31631020-31631170	WI-38	lung:	n/a	n/a
39	E2F4	chr14:31635033-31635217	MCF10A-Er-Src	breast:	n/a	n/a
40	E2F4	chr14:31604266-31604337	MCF10A-Er-Src	breast:	n/a	n/a
41	E2F4	chr14:31629032-31629295	MCF10A-Er-Src	breast:	n/a	n/a
42	EBF1	chr14:31598100-31598329	GM12878	blood:	n/a	n/a
43	EGR1	chr14:31624004-31624710	HCT-116	colon:	n/a	n/a
44	ELK1	chr14:31596909-31597214	GM12878	blood:	n/a	n/a
45	ELK1	chr14:31635563-31635592	Hela-S3	cervix:	n/a	n/a
46	EP300	chr14:31597657-31597795	GM12878	blood:	n/a	n/a
47	EP300	chr14:31596930-31597326	GM12878	blood:	n/a	n/a
48	EP300	chr14:31596963-31597318	GM12878	blood:	n/a	n/a
49	EP300	chr14:31598005-31598396	GM12878	blood:	n/a	n/a
50	EP300	chr14:31634999-31635215	Hela-S3	cervix:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:31607371-31607421	K562	blood:	n/a
2	chr14:31607371-31607421	A549	lung:	n/a
3	chr14:31607371-31607421	HMEC	breast:	n/a
4	chr14:31607371-31607421	NT2-D1	testis:	n/a
5	chr14:31607371-31607421	AG09309	skin:	n/a
6	chr14:31607371-31607421	HCT-116	colon:	n/a
7	chr14:31607371-31607421	GM12891	blood:	n/a
8	chr14:31607371-31607421	U87	brain:	n/a
9	chr14:31607371-31607421	RPTEC	kidney:	n/a
10	chr14:31607371-31607421	AG04450	lung:	fetal
11	chr14:31607371-31607421	PANC-1	pancreas:	n/a
12	chr14:31607371-31607421	GM12892	blood:	n/a
13	chr14:31607371-31607421	AG04449	skin:	fetal
14	chr14:31607371-31607421	HUVEC	blood vessel:	n/a
15	chr14:31607371-31607421	AoSMC	blood vessel:	n/a
16	chr14:31607371-31607421	HEK293	kidney:	embryo
17	chr14:31607371-31607421	T-47D	breast:	n/a
18	chr14:31607371-31607421	BJ	skin:	n/a
19	chr14:31607371-31607421	HAEpiC	amniotic membrane:	n/a
20	chr14:31607371-31607421	GM19239	blood:	n/a
21	chr14:31607371-31607421	LNCaP	prostate:	n/a
22	chr14:31607371-31607421	PFSK-1	brain:	n/a
23	chr14:31607371-31607421	SAEC	small airway:	n/a
24	chr14:31607371-31607421	HCPEpiC	choroid plexus:	n/a
25	chr14:31607371-31607421	MCF10A-Er-Src	breast:	n/a
26	chr14:31607371-31607421	NHDF-neo	bronchial:	n/a
27	chr14:31607371-31607421	Hepatocyte	liver:	n/a
28	chr14:31607371-31607421	HIPEpiC	eye:	n/a
29	chr14:31607371-31607421	HNPCEpiC	eye:	n/a
30	chr14:31607371-31607421	Jurkat	blood:	n/a
31	chr14:31607371-31607421	ovcar-3	ovarian:	n/a
32	chr14:31607371-31607421	HRE	kidney:	n/a
33	chr14:31607371-31607421	SK-N-SH	brain:	n/a
34	chr14:31607371-31607421	GM12878	blood:	n/a
35	chr14:31607371-31607421	NH-A	brain:	n/a
36	chr14:31607371-31607421	HCF	heart:	n/a
37	chr14:31607371-31607421	ProgFib	skin:	n/a
38	chr14:31607371-31607421	SKMC	muscle:	n/a
39	chr14:31607371-31607421	NHBE	bronchial:	n/a
40	chr14:31607371-31607421	HCM	heart:	n/a
41	chr14:31607371-31607421	ECC-1	luminal epithelium:	n/a
42	chr14:31607371-31607421	GM06990	blood:	n/a
43	chr14:31607371-31607421	AG09319	gingival:	n/a
44	chr14:31607371-31607421	PrEC	prostate:	n/a
45	chr14:31607371-31607421	Hela-S3	cervix:	n/a
46	chr14:31607371-31607421	HRCEpiC	kidney:	n/a
47	chr14:31607371-31607421	HL-60	blood:	n/a
48	chr14:31607371-31607421	NB4	blood:	n/a
49	chr14:31607371-31607421	AG10803	skin:	n/a
50	chr14:31607371-31607421	MCF-7	breast:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:31632190..31633831-chr14:31674115..31678545,3	MCF-7	breast:
2	chr14:31621746..31624641-chr14:31675931..31678702,3	MCF-7	breast:
3	chr14:31605351..31607300-chr14:31607732..31611422,3	MCF-7	breast:
4	chr14:31612683..31614896-chr14:31619951..31622680,2	MCF-7	breast:
5	chr14:31590905..31593026-chr14:31610871..31613579,2	MCF-7	breast:
6	chr14:31600570..31602295-chr14:31607545..31609357,2	K562	blood:
7	chr14:31612683..31614896-chr14:31619951..31622680,2	MCF-7	breast:
8	chr14:31601478..31601997-chr3:62322077..62322936,2	MCF-7	breast:
9	chr14:31632859..31634674-chr14:31887471..31889887,2	MCF-7	breast:
10	chr14:31601205..31602720-chr14:31611086..31613417,2	MCF-7	breast:
11	chr14:31344003..31345728-chr14:31604211..31605992,2	K562	blood:
12	chr14:31595755..31597635-chr14:31675471..31677370,2	MCF-7	breast:
13	chr14:31592178..31594075-chr14:31598650..31601042,2	K562	blood:
14	chr14:31592934..31595654-chr14:31599577..31602427,2	MCF-7	breast:
15	chr14:31623239..31625541-chr14:31675591..31677755,2	MCF-7	breast:
16	chr14:31573719..31576403-chr14:31594748..31597045,2	MCF-7	breast:
17	chr14:31633500..31636890-chr14:31639445..31642730,4	MCF-7	breast:
18	chr14:31632142..31635361-chr14:31675542..31678313,5	MCF-7	breast:
19	chr14:31634801..31637457-chr14:31677237..31679134,2	K562	blood:
20	chr14:31600570..31602295-chr14:31607545..31609357,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-STRN3-11	chr14:31614377-31615656	l_960_NR_027263

No data

Variant related genes	Relation type
RNU6-541P	TF binding region
HECTD1	TF binding region
RNU6-541P	CpG island
HECTD1	CpG island
ENSG00000250365	chromatin interactions
ENSG00000092148	chromatin interactions
ENSG00000207440	chromatin interactions
ENSG00000129493	chromatin interactions

Extended variants
information (count: 1673 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:1673 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs17097741	chr14:31595666-31595667	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs569035289	chr14:31595739-31595740	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs535064824	chr14:31595740-31595741	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs117279326	chr14:31595764-31595765	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs188049335	chr14:31595767-31595768	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs546438943	chr14:31595821-31595822	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs147088466	chr14:31595842-31595843	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs534512747	chr14:31595865-31595866	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs199911191	chr14:31595887-31595888	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs114581209	chr14:31595888-31595889	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs574267763	chr14:31595954-31595955	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs372671221	chr14:31595960-31595961	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs35879052	chr14:31595980-31595981	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs556103721	chr14:31595985-31595986	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs577847407	chr14:31596046-31596047	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs114777913	chr14:31596103-31596104	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs554011883	chr14:31596113-31596114	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs572229115	chr14:31596132-31596133	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs192861905	chr14:31596133-31596134	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs539979598	chr14:31596134-31596135	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs561072980	chr14:31596152-31596153	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs531609254	chr14:31596155-31596156	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs544311970	chr14:31596157-31596158	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs562505271	chr14:31596186-31596187	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs140550873	chr14:31596201-31596202	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs529140458	chr14:31596217-31596218	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs150471341	chr14:31596244-31596245	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs112721397	chr14:31596334-31596335	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs527921698	chr14:31596340-31596341	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs200979112	chr14:31596361-31596362	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs544414734	chr14:31596403-31596404	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs185292367	chr14:31596446-31596447	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs116634399	chr14:31596472-31596473	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs117260450	chr14:31596501-31596502	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs112499455	chr14:31596517-31596518	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs571214243	chr14:31596530-31596531	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs140219067	chr14:31596553-31596554	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs533086688	chr14:31596564-31596565	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs58498783	chr14:31596571-31596572	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs61671400	chr14:31596579-31596580	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs374643620	chr14:31596587-31596588	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs572167460	chr14:31596602-31596603	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs58334157	chr14:31596611-31596612	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs58528668	chr14:31596618-31596619	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs145274251	chr14:31596621-31596622	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs554732173	chr14:31596633-31596634	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs56708555	chr14:31596644-31596645	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs61240248	chr14:31596648-31596649	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs57055616	chr14:31596654-31596655	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs61639709	chr14:31596660-31596661	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16774939	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	16272173	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Epilepsy	20736978	CNVD
Mental retardation	20736978	CNVD
severe speech impairment	20736978	CNVD
speech impairment	20736978	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Chronic myeloid leukemia	20724749	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Cancer	21183584	CNVD
Leukoplakia	24403051	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chronic myeloid leukemia	16756668	CNVD
Sudden cardiac death	19188705	CNVD
Pilocytic astrocytoma	18670637	CNVD
Multiple myeloma	16616336	CNVD
Burkitt''s lymphoma	19759907	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1343 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31563800-31650000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
2	chr14:31564800-31648600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
3	chr14:31565400-31599000	Strong transcription	Adipose Nuclei	Adipose
4	chr14:31565600-31598000	Strong transcription	Liver	Liver
5	chr14:31565600-31648000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr14:31565800-31596800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr14:31566000-31599200	Strong transcription	Fetal Muscle Trunk	muscle
8	chr14:31566000-31627400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr14:31566200-31596800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr14:31566200-31597200	Strong transcription	Rectal Mucosa Donor 29	rectum
11	chr14:31566200-31599200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr14:31566200-31627000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr14:31566200-31635200	Strong transcription	Placenta	Placenta
14	chr14:31566200-31648200	Strong transcription	Primary neutrophils fromperipheralblood	blood
15	chr14:31566400-31597800	Strong transcription	Primary B cells from peripheral blood	blood
16	chr14:31566400-31597800	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr14:31566600-31597600	Strong transcription	Rectal Mucosa Donor 31	rectum
18	chr14:31567000-31597000	Strong transcription	HepG2	liver
19	chr14:31567000-31620200	Strong transcription	Duodenum Smooth Muscle	Duodenum
20	chr14:31567000-31647600	Strong transcription	Duodenum Mucosa	Duodenum
21	chr14:31567000-31651200	Strong transcription	Dnd41	blood
22	chr14:31568200-31598600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr14:31572800-31604600	Strong transcription	Fetal Intestine Large	intestine
24	chr14:31573000-31597600	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr14:31573000-31650200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr14:31573600-31608800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr14:31573800-31648200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr14:31575400-31598800	Strong transcription	Fetal Lung	lung
29	chr14:31576800-31623800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr14:31577200-31604000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
31	chr14:31577400-31598800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr14:31580200-31597000	Strong transcription	Primary hematopoietic stem cells	blood
33	chr14:31580200-31597800	Strong transcription	Primary monocytes fromperipheralblood	blood
34	chr14:31581400-31597000	Weak transcription	Stomach Mucosa	stomach
35	chr14:31587000-31598800	Strong transcription	NHDF-Ad	bronchial
36	chr14:31587600-31596600	Strong transcription	GM12878-XiMat	blood
37	chr14:31588000-31623800	Weak transcription	Psoas Muscle	Psoas
38	chr14:31588600-31607600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr14:31591800-31595800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr14:31591800-31597000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr14:31591800-31597600	Weak transcription	H9 Cell Line	embryonic stem cell
42	chr14:31591800-31597800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr14:31591800-31597800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr14:31591800-31598200	Weak transcription	Small Intestine	intestine
45	chr14:31591800-31656400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr14:31592000-31596000	Weak transcription	Pancreas	Pancrea
47	chr14:31592000-31596000	Weak transcription	Spleen	Spleen
48	chr14:31592000-31597600	Weak transcription	Aorta	Aorta
49	chr14:31592200-31597000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr14:31592200-31597000	Weak transcription	Brain Cingulate Gyrus	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links