Variant report

Variant	nsv901605
Chromosome Location	chr14:35409214-35512335
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1468)
CpG islands
(count:1223)
Chromatin interactive
region (count:90)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1468 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:35456533-35456710	HepG2	liver:	n/a	n/a
2	ARID3A	chr14:35449799-35452898	HepG2	liver:	n/a	chr14:35452584-35452600
3	ARID3A	chr14:35450353-35450528	K562	blood:	n/a	n/a
4	ARID3A	chr14:35509539-35510010	HepG2	liver:	n/a	chr14:35509792-35509808
5	ATF1	chr14:35451277-35452397	K562	blood:	n/a	chr14:35452182-35452196
6	ATF2	chr14:35451408-35452422	H1-hESC	embryonic stem cell:	n/a	chr14:35452182-35452196
7	ATF2	chr14:35451237-35452526	GM12878	blood:	n/a	chr14:35452182-35452196
8	ATF2	chr14:35451431-35452788	GM12878	blood:	n/a	chr14:35452182-35452196
9	ATF2	chr14:35451363-35452438	H1-hESC	embryonic stem cell:	n/a	chr14:35452182-35452196
10	ATF2	chr14:35504149-35504484	GM12878	blood:	n/a	n/a
11	ATF3	chr14:35451470-35452221	A549	lung:	n/a	n/a
12	ATF3	chr14:35451382-35452359	A549	lung:	n/a	n/a
13	BACH1	chr14:35451138-35451216	K562	blood:	n/a	n/a
14	BATF	chr14:35504189-35504612	GM12878	blood:	n/a	chr14:35504383-35504394
15	BATF	chr14:35504265-35504563	GM12878	blood:	n/a	chr14:35504383-35504394
16	BATF	chr14:35502715-35503130	GM12878	blood:	n/a	chr14:35502942-35502953
17	BATF	chr14:35502850-35503057	GM12878	blood:	n/a	chr14:35502942-35502953
18	BCL11A	chr14:35504236-35504481	GM12878	blood:	n/a	n/a
19	BCL3	chr14:35451609-35452394	A549	lung:	n/a	chr14:35452052-35452061 chr14:35451657-35451665
20	BCL3	chr14:35451306-35452403	A549	lung:	n/a	chr14:35452052-35452061 chr14:35451657-35451665
21	BCL3	chr14:35451369-35452377	GM12878	blood:	n/a	chr14:35452052-35452061 chr14:35451657-35451665
22	BCLAF1	chr14:35450327-35450834	GM12878	blood:	n/a	n/a
23	BCLAF1	chr14:35451328-35452663	GM12878	blood:	n/a	chr14:35452052-35452061 chr14:35451657-35451665
24	BCLAF1	chr14:35451265-35452591	GM12878	blood:	n/a	chr14:35452052-35452061 chr14:35451657-35451665
25	BHLHE40	chr14:35450069-35450816	HepG2	liver:	n/a	n/a
26	BHLHE40	chr14:35451435-35452177	A549	lung:	n/a	chr14:35451857-35451870 chr14:35451658-35451674
27	BHLHE40	chr14:35450405-35450477	K562	blood:	n/a	n/a
28	BHLHE40	chr14:35451546-35452238	HepG2	liver:	n/a	chr14:35451857-35451870 chr14:35451658-35451674
29	BHLHE40	chr14:35451594-35452335	HepG2	liver:	n/a	chr14:35451857-35451870 chr14:35451658-35451674
30	BHLHE40	chr14:35509723-35509774	K562	blood:	n/a	n/a
31	BHLHE40	chr14:35451268-35452651	GM12878	blood:	n/a	chr14:35451857-35451870 chr14:35451658-35451674
32	BHLHE40	chr14:35451084-35452554	HepG2	liver:	n/a	chr14:35451857-35451870 chr14:35451658-35451674
33	BHLHE40	chr14:35451309-35452916	K562	blood:	n/a	chr14:35451857-35451870 chr14:35451658-35451674
34	BRCA1	chr14:35451383-35452348	Hela-S3	cervix:	n/a	n/a
35	BRCA1	chr14:35451411-35452411	HepG2	liver:	n/a	n/a
36	BRCA1	chr14:35451531-35452399	GM12878	blood:	n/a	n/a
37	BRCA1	chr14:35450492-35450902	Hela-S3	cervix:	n/a	n/a
38	CBX3	chr14:35451766-35452184	K562	blood:	n/a	n/a
39	CBX3	chr14:35503606-35504100	K562	blood:	n/a	n/a
40	CBX3	chr14:35503722-35504021	K562	blood:	n/a	n/a
41	CBX3	chr14:35451395-35452317	K562	blood:	n/a	n/a
42	CCNT2	chr14:35451540-35452083	K562	blood:	n/a	chr14:35451839-35451848
43	CEBPB	chr14:35420557-35420750	Hela-S3	cervix:	n/a	chr14:35420669-35420680 chr14:35420666-35420683 chr14:35420669-35420682
44	CEBPB	chr14:35451247-35452497	GM12878	blood:	n/a	n/a
45	CEBPB	chr14:35456490-35456754	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr14:35450086-35450285	A549	lung:	n/a	n/a
47	CEBPB	chr14:35420541-35420728	HepG2	liver:	n/a	chr14:35420669-35420680 chr14:35420666-35420683 chr14:35420669-35420682
48	CEBPB	chr14:35424166-35424264	HepG2	liver:	n/a	n/a
49	CEBPB	chr14:35502339-35502472	HepG2	liver:	n/a	n/a
50	CEBPB	chr14:35451580-35452355	HepG2	liver:	n/a	n/a

(count:1223 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:35451935-35451985	BE2_C	brain:	n/a
2	chr14:35451556-35451606	BE2_C	brain:	n/a
3	chr14:35451965-35452015	AG09309	skin:	n/a
4	chr14:35451935-35451985	BE2_C	brain:	n/a
5	chr14:35451556-35451606	BE2_C	brain:	n/a
6	chr14:35451965-35452015	AG09309	skin:	n/a
7	chr14:35447884-35447934	HepG2	liver:	n/a
8	chr14:35452441-35452491	NHDF-neo	bronchial:	n/a
9	chr14:35447884-35447934	SK-N-SH_RA	brain:	n/a
10	chr14:35451556-35451606	HNPCEpiC	eye:	n/a
11	chr14:35452176-35452226	NHBE	bronchial:	n/a
12	chr14:35447884-35447934	GM06990	blood:	n/a
13	chr14:35495536-35495586	SK-N-MC	brain:	n/a
14	chr14:35409641-35409691	U87	brain:	n/a
15	chr14:35451556-35451606	PANC-1	pancreas:	n/a
16	chr14:35452353-35452403	RPTEC	kidney:	n/a
17	chr14:35451965-35452015	BJ	skin:	n/a
18	chr14:35452046-35452096	HRCEpiC	kidney:	n/a
19	chr14:35450692-35450742	NHBE	bronchial:	n/a
20	chr14:35451984-35452034	GM12891	blood:	n/a
21	chr14:35452110-35452160	HepG2	liver:	n/a
22	chr14:35451556-35451606	Hela-S3	cervix:	n/a
23	chr14:35452420-35452470	GM12891	blood:	n/a
24	chr14:35452046-35452096	PFSK-1	brain:	n/a
25	chr14:35452602-35452652	AG09309	skin:	n/a
26	chr14:35451914-35451964	ECC-1	luminal epithelium:	n/a
27	chr14:35452046-35452096	HNPCEpiC	eye:	n/a
28	chr14:35451914-35451964	HCM	heart:	n/a
29	chr14:35452353-35452403	GM12892	blood:	n/a
30	chr14:35452110-35452160	LNCaP	prostate:	n/a
31	chr14:35450692-35450742	SK-N-MC	brain:	n/a
32	chr14:35452046-35452096	PrEC	prostate:	n/a
33	chr14:35452176-35452226	AG04449	skin:	fetal
34	chr14:35452441-35452491	HCT-116	colon:	n/a
35	chr14:35451556-35451606	AG09319	gingival:	n/a
36	chr14:35452110-35452160	Hepatocyte	liver:	n/a
37	chr14:35452046-35452096	AG04450	lung:	fetal
38	chr14:35451556-35451606	HCT-116	colon:	n/a
39	chr14:35452420-35452470	HNPCEpiC	eye:	n/a
40	chr14:35452602-35452652	HL-60	blood:	n/a
41	chr14:35409641-35409691	HCM	heart:	n/a
42	chr14:35451793-35451843	HIPEpiC	eye:	n/a
43	chr14:35451793-35451843	HRE	kidney:	n/a
44	chr14:35451807-35451857	AoSMC	blood vessel:	n/a
45	chr14:35452046-35452096	ECC-1	luminal epithelium:	n/a
46	chr14:35451556-35451606	AG10803	skin:	n/a
47	chr14:35451962-35452012	NHDF-neo	bronchial:	n/a
48	chr14:35452176-35452226	HL-60	blood:	n/a
49	chr14:35452046-35452096	LNCaP	prostate:	n/a
50	chr14:35452110-35452160	ProgFib	skin:	n/a

(count:90 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr14:35341141..35345954-chr14:35450498..35453739,11	K562	blood:
2	chr14:35455082..35458071-chr14:35459564..35462136,2	MCF-7	breast:
3	chr14:35022467..35024689-chr14:35444966..35447403,2	MCF-7	breast:
4	chr14:35450376..35452323-chr14:35627573..35629639,2	K562	blood:
5	chr14:35450042..35454830-chr14:35589505..35593708,8	K562	blood:
6	chr14:35450635..35452622-chr14:35458483..35461260,2	MCF-7	breast:
7	chr1:161147107..161147971-chr14:35451769..35452587,2	Hela-S3	cervix:
8	chr14:35455186..35457809-chr14:35509575..35512529,2	K562	blood:
9	chr14:35451762..35452508-chr19:18111810..18112416,2	Hela-S3	cervix:
10	chr14:35454836..35457264-chr14:35513196..35514987,2	K562	blood:
11	chr14:35459374..35461110-chr8:86390877..86393712,2	MCF-7	breast:
12	chr14:35451366..35453471-chr14:35871625..35875238,3	MCF-7	breast:
13	chr14:35445256..35447959-chr14:35449489..35451203,2	K562	blood:
14	chr14:35346926..35348942-chr14:35435760..35437416,2	K562	blood:
15	chr14:35479120..35481576-chr14:35483868..35486347,2	MCF-7	breast:
16	chr14:35443310..35446358-chr14:35450182..35453981,5	MCF-7	breast:
17	chr14:35023701..35025768-chr14:35449276..35451419,2	K562	blood:
18	chr14:35500095..35502926-chr14:35557815..35560264,2	MCF-7	breast:
19	chr14:35511724..35513872-chr14:35864570..35867392,2	MCF-7	breast:
20	chr14:35452133..35453716-chr14:35873041..35875070,2	K562	blood:
21	chr14:35455082..35458071-chr14:35459564..35462136,2	MCF-7	breast:
22	chr14:35456800..35459337-chr14:35464974..35467131,2	K562	blood:
23	chr14:35430162..35434482-chr14:35434976..35439153,5	K562	blood:
24	chr14:35451626..35452173-chr16:74734654..74735645,2	Hela-S3	cervix:
25	chr14:35451354..35452438-chr14:64971301..64972306,3	Hela-S3	cervix:
26	chr14:35462942..35465025-chr14:35469219..35471008,2	MCF-7	breast:
27	chr14:35341122..35342965-chr14:35463628..35465327,2	K562	blood:
28	chr14:35489417..35492128-chr14:35497418..35499039,2	K562	blood:
29	chr14:35450245..35452169-chr14:35590215..35593362,3	MCF-7	breast:
30	chr14:35509776..35510382-chr14:35602542..35603513,2	MCF-7	breast:
31	chr14:35343121..35345679-chr14:35426875..35428541,2	K562	blood:
32	chr14:35405852..35407525-chr14:35456925..35458489,2	K562	blood:
33	chr14:35341948..35345853-chr14:35449382..35453241,7	K562	blood:
34	chr14:35450099..35453742-chr14:35513316..35517237,10	K562	blood:
35	chr14:35450019..35452754-chr14:35591061..35594828,4	K562	blood:
36	chr14:35492619..35494488-chr14:35513893..35516711,2	MCF-7	breast:
37	chr12:46766054..46766614-chr14:35451546..35452273,2	Hela-S3	cervix:
38	chr14:35342877..35345707-chr14:35420662..35422275,2	MCF-7	breast:
39	chr14:35343911..35346253-chr14:35481173..35482947,2	MCF-7	breast:
40	chr14:35451886..35454032-chr4:69771560..69773312,2	MCF-7	breast:
41	chr14:35465599..35469103-chr14:35471087..35474391,3	MCF-7	breast:
42	chr14:35451287..35451881-chr19:3557480..3558017,2	Hela-S3	cervix:
43	chr14:35022921..35025122-chr14:35460718..35462320,2	MCF-7	breast:
44	chr14:35484859..35486804-chr14:35511078..35512949,2	K562	blood:
45	chr14:35456800..35459337-chr14:35464974..35467131,2	K562	blood:
46	chr14:35449656..35453109-chr14:35514529..35517063,4	MCF-7	breast:
47	chr10:52384532..52385151-chr14:35451145..35451802,2	Hela-S3	cervix:
48	chr14:35341867..35346512-chr14:35447191..35456965,26	MCF-7	breast:
49	chr14:35473349..35476278-chr14:35514310..35517232,2	MCF-7	breast:
50	chr14:35341954..35346847-chr14:35449484..35456301,15	MCF-7	breast:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SRP54-5	chr14:35409128-35409702	NR_002937
2	lnc-SRP54-3	chr14:35438376-35438513	NONHSAT036352
3	lnc-FAM177A1-2	chr14:35488172-35488564	NONHSAT036358
4	lnc-SRP54-3	chr14:35435735-35436151	NONHSAT036352
5	lnc-BAZ1A-1	chr14:35449441-35452103	NONHSAT036355
6	lnc-SRP54-3	chr14:35433120-35433246	NONHSAT036352
7	lnc-FAM177A1-2	chr14:35487835-35487971	NONHSAT036358
8	lnc-SRP54-3	chr14:35436212-35436294	NONHSAT036352

No data

Variant related genes	Relation type
ENSG00000258704	TF binding region
SRP54	TF binding region
FAM177A1	TF binding region
ENSG00000258704	CpG island
SRP54	CpG island
FAM177A1	CpG island
ENSG00000198604	chromatin interactions
ENSG00000226200	chromatin interactions
ENSG00000092020	chromatin interactions
ENSG00000267231	chromatin interactions
ENSG00000100890	chromatin interactions
ENSG00000089775	chromatin interactions
ENSG00000126804	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000272626	chromatin interactions
ENSG00000161091	chromatin interactions
ENSG00000258738	chromatin interactions
ENSG00000100906	chromatin interactions
ENSG00000168404	chromatin interactions
ENSG00000097021	chromatin interactions
ENSG00000163435	chromatin interactions
ENSG00000206588	chromatin interactions
ENSG00000100883	chromatin interactions
ENSG00000158850	chromatin interactions
ENSG00000105643	chromatin interactions
ENSG00000234678	chromatin interactions
ENSG00000258790	chromatin interactions
ENSG00000145623	chromatin interactions
ENSG00000163393	chromatin interactions
ENSG00000258704	chromatin interactions
ENSG00000249740	chromatin interactions
ENSG00000198964	chromatin interactions
ENSG00000088888	chromatin interactions
ENSG00000271746	chromatin interactions
ENSG00000110958	chromatin interactions
ENSG00000259090	chromatin interactions
ENSG00000151327	chromatin interactions

Extended variants
information (count: 3897 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:3897 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1967723	chr14:35409214-35409215	Weak transcription Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs567042879	chr14:35409222-35409223	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
3	rs529657348	chr14:35409237-35409238	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
4	rs564894979	chr14:35409260-35409261	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
5	rs532149373	chr14:35409275-35409276	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
6	rs185887438	chr14:35409290-35409291	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
7	rs547475684	chr14:35409307-35409308	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
8	rs141340336	chr14:35409317-35409318	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
9	rs538600924	chr14:35409318-35409319	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
10	rs116094891	chr14:35409350-35409351	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
11	rs77962284	chr14:35409354-35409355	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
12	rs565918880	chr14:35409356-35409357	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
13	rs35988180	chr14:35409372-35409373	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
14	rs535101976	chr14:35409416-35409417	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
15	rs555075059	chr14:35409488-35409489	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
16	rs575003701	chr14:35409584-35409585	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
17	rs543760298	chr14:35409609-35409610	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
18	rs557081936	chr14:35409612-35409613	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
19	rs577464057	chr14:35409653-35409654	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
20	rs571410249	chr14:35409657-35409658	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
21	rs147050116	chr14:35409676-35409677	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs375593765	chr14:35409694-35409695	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
23	rs559498488	chr14:35409699-35409700	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs528632775	chr14:35409700-35409701	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
25	rs712315	chr14:35409701-35409702	Weak transcription Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs560607745	chr14:35409702-35409703	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
27	rs529753353	chr14:35409710-35409711	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs549744616	chr14:35409725-35409726	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs569587373	chr14:35409813-35409814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs532423799	chr14:35409825-35409826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs552530785	chr14:35409851-35409852	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs191062396	chr14:35409897-35409898	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs534777650	chr14:35409920-35409921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs554815097	chr14:35409980-35409981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs374414434	chr14:35409986-35409987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs568496488	chr14:35409998-35409999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs183260417	chr14:35410002-35410003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs540429935	chr14:35410011-35410012	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs549536001	chr14:35410020-35410021	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs567800170	chr14:35410100-35410101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs557314949	chr14:35410114-35410115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs577196459	chr14:35410177-35410178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs59159183	chr14:35410301-35410302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs138243481	chr14:35410312-35410313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs573208661	chr14:35410424-35410425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs541971416	chr14:35410499-35410500	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs8018409	chr14:35410504-35410505	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs574462542	chr14:35410549-35410550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs556628548	chr14:35410550-35410551	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs534256903	chr14:35410555-35410556	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Colorectal cancer	16774939	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Chronic myeloid leukemia	20724749	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	20955586	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Burkitt''s lymphoma	19759907	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21045282	CNVD
Cancer	21129771	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	17925434	CNVD
Colorectal cancer	16272173	CNVD
Glioma	24330732	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21858162	CNVD
Lung cancer	21569311	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2570 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:35381400-35412200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr14:35389600-35411400	Weak transcription	Aorta	Aorta
3	chr14:35390000-35412600	Weak transcription	Ovary	ovary
4	chr14:35394600-35424000	Weak transcription	Fetal Lung	lung
5	chr14:35396400-35425200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr14:35396600-35424800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:35397200-35412800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr14:35397800-35420600	Weak transcription	Thymus	Thymus
9	chr14:35398800-35410600	Weak transcription	Fetal Brain Male	brain
10	chr14:35399000-35412200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr14:35399600-35412200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr14:35400600-35427000	Weak transcription	Primary B cells from cord blood	blood
13	chr14:35400800-35412200	Weak transcription	Adipose Nuclei	Adipose
14	chr14:35401000-35411200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr14:35401000-35421400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr14:35401000-35428800	Weak transcription	GM12878-XiMat	blood
17	chr14:35401000-35440400	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr14:35401400-35412200	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr14:35401400-35412200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr14:35401400-35412600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr14:35401400-35428800	Weak transcription	Stomach Mucosa	stomach
22	chr14:35401800-35411600	Weak transcription	Brain Angular Gyrus	brain
23	chr14:35402800-35412600	Weak transcription	Primary T helper cells PMA-I stimulated	--
24	chr14:35403000-35423800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr14:35403200-35425200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr14:35403600-35425200	Weak transcription	Gastric	stomach
27	chr14:35405800-35412800	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr14:35406200-35412600	Weak transcription	Monocytes-CD14+_RO01746	blood
29	chr14:35407000-35425000	Weak transcription	Spleen	Spleen
30	chr14:35408200-35409800	Strong transcription	HepG2	liver
31	chr14:35408200-35425400	Weak transcription	Stomach Smooth Muscle	stomach
32	chr14:35408800-35409600	Strong transcription	Primary T cells from cord blood	blood
33	chr14:35409000-35419000	Weak transcription	Liver	Liver
34	chr14:35409600-35411400	Weak transcription	Primary T cells from cord blood	blood
35	chr14:35409800-35412600	Weak transcription	HepG2	liver
36	chr14:35410000-35411200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr14:35410000-35420600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr14:35410000-35425200	Weak transcription	Right Ventricle	heart
39	chr14:35411000-35434600	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr14:35411200-35411400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr14:35411200-35411600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr14:35411400-35411600	ZNF genes & repeats	Aorta	Aorta
43	chr14:35411400-35411800	Strong transcription	Primary T cells from cord blood	blood
44	chr14:35411400-35414400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr14:35411600-35411800	ZNF genes & repeats	Brain Angular Gyrus	brain
46	chr14:35411600-35412200	Weak transcription	Fetal Intestine Small	intestine
47	chr14:35411800-35412200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr14:35411800-35412600	Weak transcription	Primary T cells from cord blood	blood
49	chr14:35411800-35450000	Weak transcription	Brain Angular Gyrus	brain
50	chr14:35412200-35412400	ZNF genes & repeats	Fetal Intestine Small	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links