Variant report

Variant	nsv902213
Chromosome Location	chr14:97637197-97781834
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:36)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:36 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:97639064..97641431-chr14:97643207..97645082,2	K562	blood:
2	chr14:97697038..97699980-chr14:97703722..97706302,2	MCF-7	breast:
3	chr14:97651671..97652701-chr14:99740847..99741626,3	MCF-7	breast:
4	chr14:97751007..97753663-chr14:97754837..97757487,2	K562	blood:
5	chr14:97671104..97673006-chr14:97674619..97676270,2	K562	blood:
6	chr14:97697038..97699980-chr14:97703722..97706302,2	MCF-7	breast:
7	chr14:97050353..97051095-chr14:97764453..97765380,2	MCF-7	breast:
8	chr14:97767536..97770149-chr14:97771082..97773749,2	MCF-7	breast:
9	chr14:97717634..97718490-chr14:98050624..98051580,2	MCF-7	breast:
10	chr14:97778710..97780839-chr14:97781234..97783526,2	MCF-7	breast:
11	chr14:97764275..97766451-chr14:97769406..97772010,2	K562	blood:
12	chr14:97643292..97643925-chr14:97717949..97718598,2	MCF-7	breast:
13	chr14:97651485..97652238-chr14:98050652..98051540,4	MCF-7	breast:
14	chr14:97764275..97766451-chr14:97769406..97772010,2	K562	blood:
15	chr14:97745906..97747938-chr14:97751482..97753019,2	K562	blood:
16	chr14:97670920..97672473-chr14:97709312..97711136,2	K562	blood:
17	chr14:97745906..97747938-chr14:97751482..97753019,2	K562	blood:
18	chr14:97651095..97652058-chr14:97739587..97740524,3	MCF-7	breast:
19	chr14:97751007..97753663-chr14:97754837..97757487,2	K562	blood:
20	chr14:97773582..97775840-chr14:97784279..97786173,2	K562	blood:
21	chr14:97670920..97672473-chr14:97709312..97711136,2	K562	blood:
22	chr14:97717920..97718671-chr14:98050570..98051161,2	MCF-7	breast:
23	chr14:97671104..97673006-chr14:97674619..97676270,2	K562	blood:
24	chr14:97643292..97643925-chr14:97717949..97718598,2	MCF-7	breast:
25	chr14:97651305..97652128-chr14:98050658..98051527,2	MCF-7	breast:
26	chr14:97643101..97643643-chr14:98050723..98051516,2	MCF-7	breast:
27	chr14:97767536..97770149-chr14:97771082..97773749,2	MCF-7	breast:
28	chr14:97050494..97051205-chr14:97646447..97647466,5	MCF-7	breast:
29	chr14:97639064..97641431-chr14:97643207..97645082,2	K562	blood:
30	chr14:97651095..97652058-chr14:97739587..97740524,3	MCF-7	breast:
31	chr14:97778710..97780839-chr14:97781234..97783526,2	MCF-7	breast:
32	chr14:97651280..97652184-chr14:97764384..97765754,4	MCF-7	breast:
33	chr14:97665245..97667832-chr14:97669943..97672541,2	MCF-7	breast:
34	chr14:97651280..97652184-chr14:97764384..97765754,4	MCF-7	breast:
35	chr14:97023617..97026546-chr14:97637896..97640052,3	K562	blood:
36	chr14:97665245..97667832-chr14:97669943..97672541,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-VRK1-8	chr14:97698536-97698658	l_1054_chr14:97672173-97698658_whiteBloodCell
2	lnc-VRK1-8	chr14:97672174-97672287	l_1054_chr14:97672173-97698658_whiteBloodCell

No data

Extended variants
information (count: 3977 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:3977 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs138191500	chr14:97639026-97639027	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs537303744	chr14:97639046-97639047	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs549317982	chr14:97639064-97639065	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs567432706	chr14:97639065-97639066	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs148448013	chr14:97639066-97639067	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs553230338	chr14:97639087-97639088	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs568402965	chr14:97639116-97639117	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs572501896	chr14:97639165-97639166	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs186633219	chr14:97639195-97639196	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs116961387	chr14:97643206-97643207	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs567686662	chr14:97643211-97643212	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs535069479	chr14:97643233-97643234	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs189953972	chr14:97643234-97643235	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs146761607	chr14:97643239-97643240	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs182539634	chr14:97643264-97643265	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs373715908	chr14:97643279-97643280	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs186568936	chr14:97643322-97643323	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs538315744	chr14:97643428-97643429	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs148817234	chr14:97643449-97643450	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs575013752	chr14:97643492-97643493	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs555079638	chr14:97643496-97643497	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs542240196	chr14:97643517-97643518	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs560323960	chr14:97643532-97643533	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs116737786	chr14:97643550-97643551	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs534158755	chr14:97643575-97643576	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs143447261	chr14:97643582-97643583	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs73361953	chr14:97643600-97643601	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs531801580	chr14:97643605-97643606	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs549998851	chr14:97643612-97643613	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs78325675	chr14:97643627-97643628	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs116421300	chr14:97643629-97643630	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs199514684	chr14:97643644-97643645	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs558156922	chr14:97643657-97643658	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs150947084	chr14:97643666-97643667	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs12588937	chr14:97643667-97643668	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs551409036	chr14:97643671-97643672	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs191349257	chr14:97643699-97643700	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs578164407	chr14:97643716-97643717	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs8006234	chr14:97643737-97643738	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs555647137	chr14:97643768-97643769	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs183815358	chr14:97643779-97643780	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs535960275	chr14:97643825-97643826	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs114346964	chr14:97643833-97643834	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs61980130	chr14:97643900-97643901	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs551169702	chr14:97643957-97643958	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs189178715	chr14:97643961-97643962	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs576357970	chr14:97643973-97643974	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs145907527	chr14:97643979-97643980	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs192879773	chr14:97644028-97644029	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs185109202	chr14:97644086-97644087	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Neuroblastoma	18923191	CNVD
Barrett''s syndrome	19417022	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Developmental delay	21147756	CNVD
Glioblastoma	21080181	CNVD
Cancer	20164920	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Biliary cancer	19435499	CNVD
Follicular lymphoma	20505157	CNVD
Acute lymphoblastic leukemia	20139093	CNVD
Hepatocellular carcinoma	16750200	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Glioblastoma multiforme	21922591	CNVD
Breast cancer	21509527	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	17426248	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Ovarian cancer	22174824	CNVD
Non-small cell lung cancer	18320023	CNVD
Breast cancer	21364760	CNVD
Cancer	17440070	CNVD

Chromatin state (count:836 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:97639000-97639200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr14:97643200-97644000	Enhancers	Primary T helper naive cells from peripheral blood	blood
3	chr14:97643400-97644600	Enhancers	Primary B cells from peripheral blood	blood
4	chr14:97643600-97643800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
5	chr14:97643600-97643800	Enhancers	NHEK	skin
6	chr14:97643600-97644200	Enhancers	Primary T cells from cord blood	blood
7	chr14:97643600-97644200	Enhancers	Thymus	Thymus
8	chr14:97643600-97645400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr14:97643600-97646000	Enhancers	Fetal Thymus	thymus
10	chr14:97643600-97646800	Enhancers	Dnd41	blood
11	chr14:97643600-97647000	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr14:97643600-97647000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
13	chr14:97643800-97644000	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr14:97643800-97644000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr14:97643800-97644200	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr14:97643800-97644400	Enhancers	Primary T cells fromperipheralblood	blood
17	chr14:97643800-97644600	Enhancers	GM12878-XiMat	blood
18	chr14:97643800-97645000	Enhancers	NHDF-Ad	bronchial
19	chr14:97643800-97645200	Weak transcription	NHEK	skin
20	chr14:97644000-97645000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
21	chr14:97644000-97645000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
22	chr14:97644000-97645200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr14:97644000-97647200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr14:97644200-97645000	Weak transcription	Primary T cells from cord blood	blood
25	chr14:97644200-97645200	Weak transcription	Thymus	Thymus
26	chr14:97644200-97646400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr14:97644400-97645200	Enhancers	Osteobl	bone
28	chr14:97644400-97645600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
29	chr14:97644600-97645400	Enhancers	Primary B cells from cord blood	blood
30	chr14:97644600-97646400	Weak transcription	Primary T cells fromperipheralblood	blood
31	chr14:97645000-97645200	Enhancers	Primary T cells from cord blood	blood
32	chr14:97645000-97645200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr14:97645000-97645400	Enhancers	Primary T helper naive cells from peripheral blood	blood
34	chr14:97645000-97646000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
35	chr14:97645000-97646200	Weak transcription	NHDF-Ad	bronchial
36	chr14:97645200-97645600	Enhancers	NH-A	brain
37	chr14:97645200-97645800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr14:97645200-97646000	Enhancers	Thymus	Thymus
39	chr14:97645200-97646400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr14:97645200-97646400	Weak transcription	Osteobl	bone
41	chr14:97645200-97647200	Enhancers	NHEK	skin
42	chr14:97645200-97650200	Weak transcription	Primary T cells from cord blood	blood
43	chr14:97645600-97645800	Enhancers	Primary T killer memory cells from peripheral blood	blood
44	chr14:97645600-97646000	Weak transcription	NH-A	brain
45	chr14:97645600-97647400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chr14:97645800-97646200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
47	chr14:97645800-97646200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr14:97646000-97647200	Enhancers	NH-A	brain
49	chr14:97646000-97647400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
50	chr14:97646000-97651800	Weak transcription	Fetal Thymus	thymus

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