Variant report

Variant	nsv903993
Chromosome Location	chr15:34660416-34871296
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1975)
CpG islands
(count:1896)
Chromatin interactive
region (count:62)
LncRNA
region (count:12)
Mature miRNA
region (count: 4)
miRNA target
sites (count:2)

(count:1975 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:34781246-34781587	K562	blood:	n/a	n/a
2	ARID3A	chr15:34731584-34731600	K562	blood:	n/a	n/a
3	ARID3A	chr15:34869965-34870045	HepG2	liver:	n/a	n/a
4	ATF1	chr15:34870112-34870339	K562	blood:	n/a	n/a
5	ATF1	chr15:34761374-34761389	K562	blood:	n/a	n/a
6	ATF1	chr15:34807442-34807640	K562	blood:	n/a	n/a
7	ATF1	chr15:34808283-34808324	K562	blood:	n/a	n/a
8	ATF2	chr15:34662101-34662703	GM12878	blood:	n/a	n/a
9	ATF2	chr15:34662115-34662776	GM12878	blood:	n/a	n/a
10	ATF3	chr15:34781262-34781502	K562	blood:	n/a	n/a
11	BACH1	chr15:34806578-34807213	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr15:34729369-34729390	H1-hESC	embryonic stem cell:	n/a	n/a
13	BATF	chr15:34842337-34842744	GM12878	blood:	n/a	n/a
14	BATF	chr15:34841508-34841849	GM12878	blood:	n/a	n/a
15	BATF	chr15:34696017-34696728	GM12878	blood:	n/a	n/a
16	BATF	chr15:34762243-34762455	GM12878	blood:	n/a	n/a
17	BATF	chr15:34808073-34808311	GM12878	blood:	n/a	n/a
18	BATF	chr15:34695261-34695641	GM12878	blood:	n/a	n/a
19	BATF	chr15:34696116-34696523	GM12878	blood:	n/a	n/a
20	BATF	chr15:34662171-34662762	GM12878	blood:	n/a	chr15:34662522-34662532
21	BATF	chr15:34842238-34842949	GM12878	blood:	n/a	n/a
22	BATF	chr15:34815930-34816436	GM12878	blood:	n/a	n/a
23	BATF	chr15:34841482-34841862	GM12878	blood:	n/a	n/a
24	BATF	chr15:34662207-34662693	GM12878	blood:	n/a	chr15:34662522-34662532
25	BATF	chr15:34695287-34695628	GM12878	blood:	n/a	n/a
26	BCL11A	chr15:34696015-34696513	GM12878	blood:	n/a	n/a
27	BCL11A	chr15:34841554-34841859	GM12878	blood:	n/a	n/a
28	BCL11A	chr15:34842236-34842734	GM12878	blood:	n/a	n/a
29	BCL11A	chr15:34695333-34695638	GM12878	blood:	n/a	n/a
30	BCL11A	chr15:34816077-34816245	GM12878	blood:	n/a	chr15:34816149-34816162
31	BCLAF1	chr15:34729008-34729495	GM12878	blood:	n/a	chr15:34729354-34729367 chr15:34729445-34729458
32	BCLAF1	chr15:34729841-34730371	GM12878	blood:	n/a	n/a
33	BHLHE40	chr15:34806536-34807767	K562	blood:	n/a	chr15:34807373-34807389 chr15:34806722-34806738
34	BHLHE40	chr15:34729903-34730377	HepG2	liver:	n/a	n/a
35	BHLHE40	chr15:34806954-34807627	HepG2	liver:	n/a	chr15:34807373-34807389
36	BHLHE40	chr15:34808048-34808404	K562	blood:	n/a	n/a
37	BHLHE40	chr15:34807981-34808415	GM12878	blood:	n/a	n/a
38	BHLHE40	chr15:34781166-34781584	K562	blood:	n/a	n/a
39	BHLHE40	chr15:34728512-34728697	K562	blood:	n/a	n/a
40	BHLHE40	chr15:34869080-34869387	K562	blood:	n/a	n/a
41	BHLHE40	chr15:34806518-34806718	GM12878	blood:	n/a	n/a
42	BHLHE40	chr15:34729879-34730508	K562	blood:	n/a	n/a
43	BHLHE40	chr15:34807389-34807610	GM12878	blood:	n/a	n/a
44	BHLHE40	chr15:34804947-34805071	K562	blood:	n/a	chr15:34805006-34805019 chr15:34805002-34805023
45	BHLHE40	chr15:34729886-34730498	GM12878	blood:	n/a	n/a
46	BHLHE40	chr15:34754120-34754185	K562	blood:	n/a	n/a
47	BHLHE40	chr15:34729075-34729345	K562	blood:	n/a	n/a
48	BHLHE40	chr15:34662576-34662605	GM12878	blood:	n/a	n/a
49	CBX3	chr15:34729889-34730257	K562	blood:	n/a	n/a
50	CBX3	chr15:34781179-34781807	K562	blood:	n/a	n/a

(count:1896 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:34806349-34806399	PrEC	prostate:	n/a
2	chr15:34807050-34807100	CMK	blood:	n/a
3	chr15:34807050-34807100	HIPEpiC	eye:	n/a
4	chr15:34781891-34781941	GM19239	blood:	n/a
5	chr15:34781969-34782019	ovcar-3	ovarian:	n/a
6	chr15:34806349-34806399	PrEC	prostate:	n/a
7	chr15:34807050-34807100	CMK	blood:	n/a
8	chr15:34807050-34807100	HIPEpiC	eye:	n/a
9	chr15:34781891-34781941	GM19239	blood:	n/a
10	chr15:34781969-34782019	ovcar-3	ovarian:	n/a
11	chr15:34806810-34806860	MCF10A-Er-Src	breast:	n/a
12	chr15:34806349-34806399	Caco-2	colon:	n/a
13	chr15:34782167-34782217	GM06990	blood:	n/a
14	chr15:34787400-34787450	HRE	kidney:	n/a
15	chr15:34781891-34781941	HRCEpiC	kidney:	n/a
16	chr15:34727209-34727259	HCT-116	colon:	n/a
17	chr15:34806592-34806642	NHBE	bronchial:	n/a
18	chr15:34782820-34782870	PANC-1	pancreas:	n/a
19	chr15:34791564-34791614	HEEpiC	esophagus:	n/a
20	chr15:34786594-34786644	BE2_C	brain:	n/a
21	chr15:34806810-34806860	NT2-D1	testis:	n/a
22	chr15:34729026-34729076	HRCEpiC	kidney:	n/a
23	chr15:34781891-34781941	PFSK-1	brain:	n/a
24	chr15:34729115-34729165	SAEC	small airway:	n/a
25	chr15:34782167-34782217	HCM	heart:	n/a
26	chr15:34806592-34806642	AG04450	lung:	fetal
27	chr15:34671426-34671476	HPAEpiC	pulmonary alveolar:	n/a
28	chr15:34787920-34787970	HL-60	blood:	n/a
29	chr15:34806810-34806860	BJ	skin:	n/a
30	chr15:34787400-34787450	GM06990	blood:	n/a
31	chr15:34781969-34782019	GM06990	blood:	n/a
32	chr15:34788017-34788067	NB4	blood:	n/a
33	chr15:34781969-34782019	GM12892	blood:	n/a
34	chr15:34781705-34781755	LNCaP	prostate:	n/a
35	chr15:34788017-34788067	AG04450	lung:	fetal
36	chr15:34785380-34785430	HCPEpiC	choroid plexus:	n/a
37	chr15:34662635-34662685	Hepatocyte	liver:	n/a
38	chr15:34729310-34729360	HRPEpiC	eye:	n/a
39	chr15:34807221-34807271	HPAEpiC	pulmonary alveolar:	n/a
40	chr15:34786594-34786644	HNPCEpiC	eye:	n/a
41	chr15:34781969-34782019	HEK293	kidney:	embryo
42	chr15:34807143-34807193	K562	blood:	n/a
43	chr15:34729115-34729165	U87	brain:	n/a
44	chr15:34781969-34782019	BE2_C	brain:	n/a
45	chr15:34806810-34806860	HCT-116	colon:	n/a
46	chr15:34782820-34782870	HEK293	kidney:	embryo
47	chr15:34730071-34730121	NHBE	bronchial:	n/a
48	chr15:34781705-34781755	U87	brain:	n/a
49	chr15:34788017-34788067	GM12878	blood:	n/a
50	chr15:34791564-34791614	ECC-1	luminal epithelium:	n/a

(count:62 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:34790196..34793794-chr15:34794467..34797662,3	K562	blood:
2	chr15:34659866..34661509-chr15:34661998..34663782,2	K562	blood:
3	chr15:34635005..34635906-chr15:34659046..34660693,6	K562	blood:
4	chr15:34634571..34635945-chr15:34658808..34660439,12	MCF-7	breast:
5	chr15:34393027..34397233-chr15:34658612..34660877,5	K562	blood:
6	chr15:34658214..34660711-chr15:34806608..34809602,2	K562	blood:
7	chr15:34728587..34731061-chr15:34780506..34783189,3	K562	blood:
8	chr15:34727581..34729084-chr15:34874171..34876472,2	MCF-7	breast:
9	chr15:34500928..34503711-chr15:34659510..34661352,2	MCF-7	breast:
10	chr15:34783968..34786265-chr15:34799018..34801586,2	K562	blood:
11	chr15:34728587..34731061-chr15:34780506..34783189,3	K562	blood:
12	chr15:34515223..34518649-chr15:34658701..34662221,4	K562	blood:
13	chr15:34786054..34786721-chr7:5632299..5632821,2	HCT-116	colon:
14	chr15:34500776..34502841-chr15:34668848..34671428,2	K562	blood:
15	chr15:34769198..34772919-chr15:34774454..34777192,3	K562	blood:
16	chr15:34868472..34871070-chr15:34876144..34878325,2	K562	blood:
17	chr15:34654804..34656714-chr15:34658910..34661703,3	K562	blood:
18	chr15:34770080..34772217-chr15:34772786..34775252,2	K562	blood:
19	chr15:34770080..34772217-chr15:34772786..34775252,2	K562	blood:
20	chr15:34500871..34503422-chr15:34659158..34662481,4	K562	blood:
21	chr15:34728587..34731061-chr15:34780506..34783189,2	K562	blood:
22	chr15:34759701..34761289-chr15:34761464..34762969,2	K562	blood:
23	chr15:34728587..34731061-chr15:34780506..34783189,2	K562	blood:
24	chr15:34774551..34776237-chr15:34779411..34782082,2	K562	blood:
25	chr15:34633689..34636672-chr15:34659379..34661265,2	MCF-7	breast:
26	chr15:34761476..34764376-chr15:34768521..34770931,2	K562	blood:
27	chr15:34728066..34730668-chr15:34791069..34792682,2	K562	blood:
28	chr15:34761476..34764376-chr15:34768521..34770931,2	K562	blood:
29	chr15:34659441..34662117-chr15:34875107..34877933,3	K562	blood:
30	chr15:34727095..34731466-chr15:34878887..34881950,4	K562	blood:
31	chr15:34727885..34731466-chr15:34878887..34881950,4	K562	blood:
32	chr15:34515761..34518007-chr15:34659442..34662221,3	K562	blood:
33	chr15:34783968..34786265-chr15:34799018..34801586,2	K562	blood:
34	chr15:34659866..34661509-chr15:34661998..34663782,2	K562	blood:
35	chr15:34727667..34729400-chr15:34875206..34876777,2	K562	blood:
36	chr15:34790342..34793794-chr15:34793900..34797346,3	K562	blood:
37	chr15:34655711..34662054-chr15:34662110..34667087,9	K562	blood:
38	chr15:34655711..34662054-chr15:34662110..34667087,9	K562	blood:
39	chr15:34726561..34729987-chr15:34871215..34874723,3	K562	blood:
40	chr15:34762215..34765168-chr15:34878877..34880750,2	K562	blood:
41	chr15:34728131..34733225-chr15:34735717..34740218,7	K562	blood:
42	chr15:34759701..34761289-chr15:34761464..34762969,2	K562	blood:
43	chr15:34729318..34730097-chr5:1799590..1800354,2	Hela-S3	cervix:
44	chr15:34786049..34786720-chr7:5632277..5632906,2	NB4	blood:
45	chr15:34519148..34521644-chr15:34659451..34661317,2	K562	blood:
46	chr15:34635280..34637526-chr15:34658001..34660457,2	K562	blood:
47	chr15:34633931..34636680-chr15:34728775..34730381,2	K562	blood:
48	chr15:34726561..34729987-chr15:34871215..34874723,3	K562	blood:
49	chr15:34728531..34731203-chr15:34733693..34737649,5	K562	blood:
50	chr15:34790196..34793794-chr15:34794467..34797662,3	K562	blood:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT140232
2	lnc-GJD2-3	chr15:34858091-34858674	NONHSAT041597
3	lnc-GJD2-4	chr15:34843392-34843477	NONHSAT140232
4	lnc-GJD2-4	chr15:34867026-34867115	NONHSAT041596
5	lnc-GJD2-4	chr15:34845096-34845292	NONHSAT140232
6	lnc-C15orf55-4	chr15:34752685-34752950	uc_384_+
7	lnc-GJD2-4	chr15:34845174-34845292	NONHSAT041596
8	lnc-LPCAT4-1	chr15:34698878-34699071	NONHSAT041586
9	lnc-LPCAT4-1	chr15:34699777-34699936	NONHSAT041586
10	lnc-LPCAT4-1	chr15:34720816-34721126	NONHSAT041586
11	lnc-GOLGA8B-1	chr15:34752685-34752950	uc_384_-
12	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT041596

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1233-5p	chr15:34820548-34820569	MIMAT0022943_1
hsa-miR-1233-3p	chr15:34674270-34674289	MIMAT0005588
hsa-miR-1233-3p	chr15:34820491-34820510	MIMAT0005588_1
hsa-miR-1233-5p	chr15:34674327-34674348	MIMAT0022943

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	GOLGA8B	hsa-miR-15a-5p	chr15:34817527-34817548
2	GOLGA8B	hsa-miR-32-5p	chr15:34818291-34818311

Variant related genes	Relation type
MIR1233-1	TF binding region
LPCAT4	TF binding region
ENSG00000261081	TF binding region
ENSG00000261559	TF binding region
MIR1233-2	TF binding region
ENSG00000259892	TF binding region
ENSG00000260639	TF binding region
ENSG00000259904	TF binding region
GOLGA8A	TF binding region
HNRNPLP2	TF binding region
GOLGA8B	TF binding region
ENSG00000266205	TF binding region
MIR1233-1	CpG island
LPCAT4	CpG island
ENSG00000261081	CpG island
ENSG00000261559	CpG island
MIR1233-2	CpG island
ENSG00000259892	CpG island
ENSG00000260639	CpG island
ENSG00000259904	CpG island
GOLGA8A	CpG island
HNRNPLP2	CpG island
GOLGA8B	CpG island
ENSG00000266205	CpG island
ENSG00000075618	chromatin interactions
ENSG00000215252	chromatin interactions
ENSG00000134152	chromatin interactions
ENSG00000259904	chromatin interactions
ENSG00000176454	chromatin interactions
ENSG00000266205	chromatin interactions
ENSG00000182117	chromatin interactions
ENSG00000184507	chromatin interactions
ENSG00000259917	chromatin interactions
ENSG00000134153	chromatin interactions
ENSG00000171421	chromatin interactions
ENSG00000198146	chromatin interactions
ENSG00000182405	chromatin interactions
ENSG00000175265	chromatin interactions
ENSG00000128463	chromatin interactions

Extended variants
information (count: 5850 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:5850 , 50 per page) page: 1 2 3 4 5 6 7 ... 117

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs347897	chr15:34660416-34660417	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs141593755	chr15:34660419-34660420	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
3	rs562621921	chr15:34660467-34660468	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
4	rs79062216	chr15:34660484-34660485	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
5	rs548203330	chr15:34660498-34660499	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
6	rs566512608	chr15:34660525-34660526	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
7	rs567974740	chr15:34660530-34660531	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
8	rs527291745	chr15:34660537-34660538	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
9	rs368339695	chr15:34660539-34660540	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
10	rs146196346	chr15:34660546-34660547	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
11	rs80164427	chr15:34660593-34660594	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
12	rs4984214	chr15:34660657-34660658	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs75974359	chr15:34660659-34660660	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
14	rs568658031	chr15:34660686-34660687	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
15	rs535787216	chr15:34660698-34660699	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
16	rs373663756	chr15:34660699-34660700	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
17	rs142006268	chr15:34660715-34660716	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
18	rs563153134	chr15:34660717-34660718	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
19	rs554055218	chr15:34660736-34660737	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
20	rs572063974	chr15:34660760-34660761	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
21	rs149649424	chr15:34660767-34660768	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
22	rs4984222	chr15:34660810-34660811	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs60290210	chr15:34660856-34660857	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
24	rs71119959	chr15:34660861-34660862	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
25	rs373053571	chr15:34660862-34660863	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
26	rs62017532	chr15:34660866-34660867	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
27	rs377308526	chr15:34660869-34660870	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
28	rs60364362	chr15:34660874-34660875	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
29	rs377375015	chr15:34660880-34660881	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
30	rs191656091	chr15:34660929-34660930	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
31	rs57733993	chr15:34660933-34660934	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs574633338	chr15:34660968-34660969	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
33	rs61690011	chr15:34661018-34661019	Weak transcription Enhancers	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs560466285	chr15:34661096-34661097	Weak transcription Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
35	rs61075561	chr15:34661101-34661102	Weak transcription Enhancers	Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs112585229	chr15:34661117-34661118	Weak transcription Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
37	rs34496771	chr15:34661171-34661172	Weak transcription Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
38	rs398026814	chr15:34661183-34661184	Weak transcription Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs183821390	chr15:34661213-34661214	Weak transcription Enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
40	rs61114468	chr15:34661214-34661215	Weak transcription Enhancers	Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs59383155	chr15:34661258-34661259	Weak transcription Enhancers	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs568601030	chr15:34661259-34661260	Weak transcription Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
43	rs372080496	chr15:34661264-34661265	Weak transcription Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
44	rs375443249	chr15:34661320-34661321	Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs60034143	chr15:34661339-34661340	Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs543810613	chr15:34661357-34661358	Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs12900215	chr15:34661360-34661361	Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs541065908	chr15:34661386-34661387	Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
49	rs515190	chr15:34661424-34661425	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
50	rs188095018	chr15:34661475-34661476	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Prader-willi syndrome	21504564	CNVD
Cancer	17440070	CNVD
Basal cell lymphoma	17053054	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1716 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34657600-34660600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr15:34658000-34660600	Active TSS	HUES48 Cell Line	embryonic stem cell
3	chr15:34658200-34660600	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr15:34658200-34660800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr15:34658400-34660600	Active TSS	Fetal Intestine Large	intestine
6	chr15:34658400-34660600	Active TSS	Sigmoid Colon	Sigmoid Colon
7	chr15:34658400-34660800	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr15:34658400-34660800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr15:34658400-34660800	Active TSS	NHLF	lung
10	chr15:34658600-34660600	Active TSS	H1 Cell Line	embryonic stem cell
11	chr15:34658600-34660600	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr15:34658600-34660600	Active TSS	Primary T helper cells PMA-I stimulated	--
13	chr15:34658600-34660600	Active TSS	Esophagus	oesophagus
14	chr15:34658600-34660800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr15:34658600-34660800	Active TSS	HSMM	muscle
16	chr15:34658600-34661000	Active TSS	Rectal Smooth Muscle	rectum
17	chr15:34658800-34660600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr15:34659800-34660600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr15:34660000-34660600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr15:34660000-34660600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr15:34660000-34660600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
22	chr15:34660000-34660600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr15:34660000-34660600	Flanking Active TSS	Primary B cells from peripheral blood	blood
24	chr15:34660000-34660600	Flanking Active TSS	Primary hematopoietic stem cells	blood
25	chr15:34660000-34660600	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
26	chr15:34660000-34660600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
27	chr15:34660000-34660600	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
28	chr15:34660000-34660600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
29	chr15:34660000-34660600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr15:34660000-34660600	Flanking Active TSS	Adipose Nuclei	Adipose
31	chr15:34660000-34660600	Flanking Active TSS	Liver	Liver
32	chr15:34660000-34660600	Flanking Active TSS	Brain Angular Gyrus	brain
33	chr15:34660000-34660600	Flanking Active TSS	Brain Cingulate Gyrus	brain
34	chr15:34660000-34660600	Flanking Active TSS	Brain Hippocampus Middle	brain
35	chr15:34660000-34660600	Flanking Active TSS	Colonic Mucosa	Colon
36	chr15:34660000-34660600	Flanking Active TSS	Fetal Brain Male	brain
37	chr15:34660000-34660600	Flanking Active TSS	Fetal Brain Female	brain
38	chr15:34660000-34660600	Flanking Active TSS	Fetal Heart	heart
39	chr15:34660000-34660600	Flanking Active TSS	Fetal Kidney	kidney
40	chr15:34660000-34660600	Flanking Active TSS	Fetal Muscle Leg	muscle
41	chr15:34660000-34660600	Flanking Active TSS	Placenta	Placenta
42	chr15:34660000-34660600	Flanking Active TSS	Fetal Stomach	stomach
43	chr15:34660000-34660600	Active TSS	Right Atrium	heart
44	chr15:34660000-34660600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
45	chr15:34660000-34660600	Weak transcription	Spleen	Spleen
46	chr15:34660000-34660600	Flanking Active TSS	HSMMtube	muscle
47	chr15:34660000-34660600	Flanking Active TSS	HUVEC	blood vessel
48	chr15:34660000-34660600	Flanking Active TSS	K562	blood
49	chr15:34660000-34660600	Flanking Active TSS	NH-A	brain
50	chr15:34660000-34660600	Flanking Active TSS	NHEK	skin

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