Variant report

Variant	nsv904128
Chromosome Location	chr15:42147639-42207905
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1248)
CpG islands
(count:1526)
Chromatin interactive
region (count:79)
LncRNA
region (count:30)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:1248 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr15:42189610-42189967	GM12878	blood:	n/a	n/a
2	ATF2	chr15:42196708-42197014	GM12878	blood:	n/a	n/a
3	ATF2	chr15:42186885-42187315	GM12878	blood:	n/a	n/a
4	ATF3	chr15:42187005-42187159	K562	blood:	n/a	n/a
5	BACH1	chr15:42196725-42197064	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr15:42174187-42174314	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr15:42187016-42187237	GM12878	blood:	n/a	chr15:42187113-42187124 chr15:42187114-42187124
8	BATF	chr15:42186963-42187346	GM12878	blood:	n/a	chr15:42187113-42187124 chr15:42187114-42187124
9	BCL3	chr15:42186968-42187472	GM12878	blood:	n/a	n/a
10	BCLAF1	chr15:42186868-42187379	GM12878	blood:	n/a	n/a
11	BHLHE40	chr15:42152267-42152554	K562	blood:	n/a	n/a
12	BHLHE40	chr15:42187157-42187530	K562	blood:	n/a	n/a
13	BHLHE40	chr15:42196799-42197103	K562	blood:	n/a	n/a
14	BHLHE40	chr15:42186993-42187298	GM12878	blood:	n/a	n/a
15	BHLHE40	chr15:42196757-42197089	GM12878	blood:	n/a	n/a
16	BHLHE40	chr15:42174084-42174352	K562	blood:	n/a	n/a
17	BHLHE40	chr15:42171644-42171902	K562	blood:	n/a	chr15:42171770-42171779 chr15:42171764-42171785 chr15:42171768-42171781 chr15:42171770-42171779 chr15:42171771-42171780
18	BRCA1	chr15:42187447-42187552	HepG2	liver:	n/a	n/a
19	BRCA1	chr15:42196808-42197025	Hela-S3	cervix:	n/a	n/a
20	CBX3	chr15:42174034-42174388	K562	blood:	n/a	n/a
21	CBX3	chr15:42198375-42198741	K562	blood:	n/a	n/a
22	CCNT2	chr15:42196935-42197135	K562	blood:	n/a	n/a
23	CCNT2	chr15:42187001-42187250	K562	blood:	n/a	n/a
24	CEBPB	chr15:42207626-42207912	HepG2	liver:	n/a	n/a
25	CEBPB	chr15:42162931-42163210	IMR90	lung:	n/a	n/a
26	CEBPB	chr15:42174115-42174137	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr15:42187373-42187588	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr15:42149896-42150096	HepG2	liver:	n/a	n/a
29	CEBPB	chr15:42202122-42202135	HepG2	liver:	n/a	n/a
30	CHD2	chr15:42152437-42152610	HepG2	liver:	n/a	n/a
31	CHD2	chr15:42196715-42197055	H1-hESC	embryonic stem cell:	n/a	n/a
32	CHD2	chr15:42196936-42197089	HepG2	liver:	n/a	n/a
33	CHD2	chr15:42196763-42197029	GM12878	blood:	n/a	n/a
34	CHD2	chr15:42187127-42187250	HepG2	liver:	n/a	n/a
35	CHD2	chr15:42196745-42197031	Hela-S3	cervix:	n/a	n/a
36	CHD2	chr15:42174199-42174290	H1-hESC	embryonic stem cell:	n/a	n/a
37	CTCF	chr15:42152400-42152550	AG09309	skin:	n/a	n/a
38	CTCF	chr15:42196742-42197073	Spleen_OC	spleen:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
39	CTCF	chr15:42152346-42152508	MCF-7	breast:	n/a	n/a
40	CTCF	chr15:42196737-42197060	Lung_OC	lung:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
41	CTCF	chr15:42187000-42187150	BE2_C	brain:	n/a	n/a
42	CTCF	chr15:42196840-42196990	HMF	breast:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
43	CTCF	chr15:42196767-42197046	LNCaP	prostate:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
44	CTCF	chr15:42196820-42196970	HCT-116	colon:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
45	CTCF	chr15:42196789-42197051	ProgFib	skin:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
46	CTCF	chr15:42169255-42169310	GM12891	blood:	n/a	n/a
47	CTCF	chr15:42187040-42187190	GM12867	blood:	n/a	n/a
48	CTCF	chr15:42187522-42187536	NHEK	skin:	n/a	n/a
49	CTCF	chr15:42152325-42152503	GM12892	blood:	n/a	n/a
50	CTCF	chr15:42152345-42152470	GM12878	blood:	n/a	n/a

(count:1526 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:42186124-42186174	HMEC	breast:	n/a
2	chr15:42186124-42186174	HMEC	breast:	n/a
3	chr15:42187179-42187229	GM12878	blood:	n/a
4	chr15:42186473-42186523	HepG2	liver:	n/a
5	chr15:42186473-42186523	HRPEpiC	eye:	n/a
6	chr15:42170125-42170175	PrEC	prostate:	n/a
7	chr15:42193157-42193207	RPTEC	kidney:	n/a
8	chr15:42173869-42173919	BJ	skin:	n/a
9	chr15:42174934-42174984	ovcar-3	ovarian:	n/a
10	chr15:42186945-42186995	HEEpiC	esophagus:	n/a
11	chr15:42193477-42193527	PFSK-1	brain:	n/a
12	chr15:42170125-42170175	HCPEpiC	choroid plexus:	n/a
13	chr15:42193112-42193162	HCF	heart:	n/a
14	chr15:42192995-42193045	SAEC	small airway:	n/a
15	chr15:42174934-42174984	AG04449	skin:	fetal
16	chr15:42170125-42170175	HCM	heart:	n/a
17	chr15:42185659-42185709	SK-N-SH	brain:	n/a
18	chr15:42187036-42187086	NHDF-neo	bronchial:	n/a
19	chr15:42186377-42186427	SKMC	muscle:	n/a
20	chr15:42174934-42174984	GM06990	blood:	n/a
21	chr15:42186377-42186427	ECC-1	luminal epithelium:	n/a
22	chr15:42154836-42154886	AG09319	gingival:	n/a
23	chr15:42170125-42170175	SK-N-SH	brain:	n/a
24	chr15:42192995-42193045	GM12878	blood:	n/a
25	chr15:42192297-42192347	NT2-D1	testis:	n/a
26	chr15:42192297-42192347	PFSK-1	brain:	n/a
27	chr15:42193477-42193527	ovcar-3	ovarian:	n/a
28	chr15:42173869-42173919	PFSK-1	brain:	n/a
29	chr15:42170125-42170175	HL-60	blood:	n/a
30	chr15:42178365-42178415	HRPEpiC	eye:	n/a
31	chr15:42185659-42185709	HRCEpiC	kidney:	n/a
32	chr15:42174934-42174984	U87	brain:	n/a
33	chr15:42186945-42186995	AG04449	skin:	fetal
34	chr15:42170125-42170175	NHDF-neo	bronchial:	n/a
35	chr15:42174085-42174135	SK-N-SH	brain:	n/a
36	chr15:42197055-42197105	U87	brain:	n/a
37	chr15:42186377-42186427	HMEC	breast:	n/a
38	chr15:42187649-42187699	SAEC	small airway:	n/a
39	chr15:42187649-42187699	NHDF-neo	bronchial:	n/a
40	chr15:42154836-42154886	PrEC	prostate:	n/a
41	chr15:42174516-42174566	GM06990	blood:	n/a
42	chr15:42170125-42170175	MCF10A-Er-Src	breast:	n/a
43	chr15:42170125-42170175	AG04450	lung:	fetal
44	chr15:42192995-42193045	PFSK-1	brain:	n/a
45	chr15:42192995-42193045	AG09319	gingival:	n/a
46	chr15:42185659-42185709	SK-N-SH_RA	brain:	n/a
47	chr15:42187036-42187086	AoSMC	blood vessel:	n/a
48	chr15:42174823-42174873	HPAEpiC	pulmonary alveolar:	n/a
49	chr15:42193157-42193207	IMR90	lung:	fetal
50	chr15:42174516-42174566	NT2-D1	testis:	n/a

(count:79 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:42202438..42205069-chr15:42210826..42212891,2	MCF-7	breast:
2	chr15:42169351..42171668-chr15:42175525..42178438,2	K562	blood:
3	chr15:42196472..42197471-chr15:42376282..42376802,2	K562	blood:
4	chr15:42176708..42178291-chr15:42195146..42197616,2	K562	blood:
5	chr15:42151221..42156188-chr15:42156216..42158464,5	K562	blood:
6	chr15:42067124..42069819-chr15:42188780..42190537,2	K562	blood:
7	chr15:42182721..42185354-chr15:42206031..42208454,3	K562	blood:
8	chr15:42180442..42182824-chr15:42195792..42198246,2	K562	blood:
9	chr15:42154642..42156337-chr15:42158761..42160269,2	K562	blood:
10	chr15:42065473..42068140-chr15:42193674..42195724,2	K562	blood:
11	chr15:42200541..42203413-chr15:42204605..42206886,2	K562	blood:
12	chr15:42065735..42068366-chr15:42158320..42160096,2	K562	blood:
13	chr15:42147889..42150225-chr15:42151669..42154619,2	MCF-7	breast:
14	chr15:42184791..42187118-chr15:42195366..42196977,2	K562	blood:
15	chr15:42190524..42192250-chr15:42192419..42194195,2	K562	blood:
16	chr15:42157610..42159753-chr15:42169357..42171774,2	K562	blood:
17	chr15:42154642..42156337-chr15:42158761..42160269,2	K562	blood:
18	chr15:42161749..42164625-chr15:42167618..42170271,3	K562	blood:
19	chr15:42196907..42199684-chr15:42201909..42205293,3	K562	blood:
20	chr15:42176708..42178291-chr15:42195146..42197616,2	K562	blood:
21	chr15:42147889..42150225-chr15:42151669..42154619,2	MCF-7	breast:
22	chr15:42157479..42160214-chr15:42160930..42163117,2	MCF-7	breast:
23	chr15:42116882..42118794-chr15:42146288..42147795,2	K562	blood:
24	chr15:42153612..42155605-chr15:42159642..42162019,2	MCF-7	breast:
25	chr15:42151221..42156188-chr15:42156216..42158464,5	K562	blood:
26	chr15:42190524..42192250-chr15:42192419..42194195,2	K562	blood:
27	chr15:42200852..42203519-chr15:42209900..42211491,2	K562	blood:
28	chr15:42150747..42152641-chr15:42159994..42161645,2	K562	blood:
29	chr15:42148784..42150939-chr15:42202289..42204151,2	MCF-7	breast:
30	chr15:42169351..42171668-chr15:42175525..42178438,2	K562	blood:
31	chr15:42165119..42167610-chr15:42168028..42170441,2	K562	blood:
32	chr15:42066376..42067229-chr15:42196456..42197004,2	K562	blood:
33	chr15:42146846..42149806-chr15:42162512..42164389,2	K562	blood:
34	chr15:42181594..42183460-chr15:42186970..42189193,2	K562	blood:
35	chr15:42153612..42155605-chr15:42159642..42162019,2	MCF-7	breast:
36	chr15:42130329..42131971-chr15:42170676..42172452,2	K562	blood:
37	chr15:42170088..42170778-chr15:42196301..42197330,4	K562	blood:
38	chr15:42169311..42172233-chr15:42179875..42182296,2	MCF-7	breast:
39	chr15:42131596..42134108-chr15:42153525..42155658,2	K562	blood:
40	chr15:42180442..42182824-chr15:42195792..42198246,2	K562	blood:
41	chr15:42194241..42196970-chr15:42258249..42260328,2	K562	blood:
42	chr15:42160817..42162862-chr15:42184230..42187177,2	K562	blood:
43	chr15:42145763..42147692-chr15:42149451..42151046,2	K562	blood:
44	chr15:42148229..42150660-chr15:42156373..42159189,2	K562	blood:
45	chr15:42175250..42178134-chr15:42183992..42185929,2	K562	blood:
46	chr15:42165119..42167610-chr15:42168028..42170441,2	K562	blood:
47	chr15:42130119..42131750-chr15:42192349..42194959,2	K562	blood:
48	chr15:42179476..42182408-chr15:42189392..42190926,2	K562	blood:
49	chr15:42139809..42142475-chr15:42153474..42155142,2	MCF-7	breast:
50	chr15:42179476..42182408-chr15:42189392..42190926,2	K562	blood:

(count:30 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42191029	NONHSAT041980
2	lnc-JMJD7-PLA2G4B-2	chr15:42189689-42189719	ENSG00000174171.4
3	lnc-JMJD7-PLA2G4B-1	chr15:42184991-42187534	ENSG00000174171.3
4	lnc-JMJD7-PLA2G4B-2	chr15:42190708-42192352	NONHSAT041985
5	lnc-JMJD7-PLA2G4B-2	chr15:42189688-42189719	ENSG00000260556.1
6	lnc-SPTBN5-3	chr15:42188137-42189031	ENSG00000272003.1
7	lnc-JMJD7-PLA2G4B-2	chr15:42185255-42185276	NONHSAT041981
8	lnc-JMJD7-PLA2G4B-2	chr15:42187721-42188135	NONHSAT041976
9	lnc-JMJD7-PLA2G4B-2	chr15:42189527-42189586	ENSG00000174171.4
10	lnc-JMJD7-PLA2G4B-2	chr15:42189463-42189719	NONHSAT041980
11	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42191025	NONHSAT041984
12	lnc-SPTBN5-4	chr15:42191630-42192208	NONHSAT041986
13	lnc-JMJD7-PLA2G4B-1	chr15:42187980-42188141	ENSG00000174171.3
14	lnc-JMJD7-PLA2G4B-2	chr15:42184974-42185276	NONHSAT041976
15	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42190773	ENSG00000260556.1
16	lnc-JMJD7-PLA2G4B-1	chr15:42187782-42187867	ENSG00000174171.3
17	lnc-JMJD7-PLA2G4B-2	chr15:42187778-42188134	NONHSAT041977
18	lnc-JMJD7-PLA2G4B-2	chr15:42187778-42188079	NONHSAT041981
19	lnc-JMJD7-PLA2G4B-2	chr15:42185134-42186566	NONHSAT041977
20	lnc-JMJD7-PLA2G4B-1	chr15:42184991-42185019	ENSG00000174171.3
21	lnc-JMJD7-PLA2G4B-2	chr15:42188198-42189719	NONHSAT041984
22	lnc-JMJD7-PLA2G4B-2	chr15:42184991-42185019	ENSG00000174171.4
23	lnc-JMJD7-PLA2G4B-1	chr15:42187383-42187534	ENSG00000174171.3
24	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42190773	ENSG00000174171.4
25	lnc-JMJD7-PLA2G4B-1	chr15:42189527-42189585	ENSG00000174171.3
26	lnc-JMJD7-PLA2G4B-1	chr15:42187183-42188141	ENSG00000174171.3
27	lnc-JMJD7-PLA2G4B-2	chr15:42184987-42185019	NONHSAT041977
28	lnc-JMJD7-PLA2G4B-2	chr15:42185242-42185276	NONHSAT041980
29	lnc-JMJD7-PLA2G4B-1	chr15:42187778-42188133	ENSG00000174171.3
30	lnc-JMJD7-PLA2G4B-2	chr15:42189297-42190432	NONHSAT041985

miRNA name	Chromosome Location	mirBase accession
hsa-miR-4310	chr15:42158703-42158718	MIMAT0016862

No data

Variant related genes	Relation type
MIR4310	TF binding region
SPTBN5	TF binding region
RNA5SP393	TF binding region
ENSG00000272003	TF binding region
ENSG00000174171	TF binding region
MIR4310	CpG island
SPTBN5	CpG island
RNA5SP393	CpG island
ENSG00000272003	CpG island
ENSG00000174171	CpG island
ENSG00000174171	chromatin interactions
ENSG00000272003	chromatin interactions
ENSG00000264850	chromatin interactions
ENSG00000137802	chromatin interactions
ENSG00000260814	chromatin interactions
ENSG00000137877	chromatin interactions
ENSG00000200293	chromatin interactions
ENSG00000243708	chromatin interactions

Extended variants
information (count: 2917 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:2917 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2305655	chr15:42147639-42147640	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs565236273	chr15:42147661-42147662	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs1672467	chr15:42147663-42147664	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance
4	rs549655092	chr15:42147713-42147714	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs141589783	chr15:42147722-42147723	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs184663655	chr15:42147723-42147724	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs376447400	chr15:42147724-42147725	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs370954047	chr15:42147725-42147726	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs117023042	chr15:42147730-42147731	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs200899775	chr15:42147739-42147740	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs112584624	chr15:42147740-42147741	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs368642766	chr15:42147775-42147776	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs7173104	chr15:42147785-42147786	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs371936039	chr15:42147799-42147800	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs374980751	chr15:42147800-42147801	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs368037342	chr15:42147805-42147806	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs371680421	chr15:42147815-42147816	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs376374505	chr15:42147816-42147817	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs370002662	chr15:42147846-42147847	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs372618835	chr15:42147847-42147848	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs550297635	chr15:42147863-42147864	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs375071219	chr15:42147866-42147867	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs375807298	chr15:42147878-42147879	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs574356509	chr15:42147892-42147893	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs56199567	chr15:42147893-42147894	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	mRNA abundance
26	rs373127527	chr15:42147904-42147905	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs376262153	chr15:42147913-42147914	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs559855200	chr15:42147932-42147933	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs142529799	chr15:42147933-42147934	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs573359317	chr15:42147944-42147945	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs372911257	chr15:42147949-42147950	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs369099283	chr15:42147950-42147951	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs372524706	chr15:42147963-42147964	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs375626001	chr15:42147968-42147969	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs139609203	chr15:42147976-42147977	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs550534256	chr15:42147980-42147981	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs560962111	chr15:42147995-42147996	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs144523021	chr15:42148003-42148004	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs55959989	chr15:42148010-42148011	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs565867310	chr15:42148032-42148033	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs377109732	chr15:42148054-42148055	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs4924582	chr15:42148064-42148065	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs528317754	chr15:42148091-42148092	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs551444067	chr15:42148099-42148100	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs371901375	chr15:42148115-42148116	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs538894466	chr15:42148137-42148138	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs571396680	chr15:42148166-42148167	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs537163117	chr15:42148207-42148208	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs189896133	chr15:42148227-42148228	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs567278033	chr15:42148250-42148251	Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	20164920	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Cancer	21129771	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21045282	CNVD
Breast cancer	22032731	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Myelofibrosis	22110671	CNVD
Maculopathy	20981449	CNVD
Gastric adenocarcinoma	19115996	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1926 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:42126200-42152400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
2	chr15:42131000-42162800	Weak transcription	HSMM	muscle
3	chr15:42138200-42173400	Weak transcription	Right Atrium	heart
4	chr15:42140400-42147800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr15:42141000-42149400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr15:42141000-42152200	Weak transcription	Primary T helper cells PMA-I stimulated	--
7	chr15:42141000-42154600	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr15:42141200-42155200	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr15:42141200-42191200	Weak transcription	Aorta	Aorta
10	chr15:42141400-42152400	Weak transcription	Primary T helper cells fromperipheralblood	blood
11	chr15:42141400-42155800	Weak transcription	HSMMtube	muscle
12	chr15:42141600-42152200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr15:42141600-42152200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr15:42141600-42152200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr15:42141600-42152400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr15:42141600-42162600	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr15:42141600-42163000	Weak transcription	Left Ventricle	heart
18	chr15:42141800-42152600	Weak transcription	Thymus	Thymus
19	chr15:42141800-42158200	Weak transcription	Liver	Liver
20	chr15:42142000-42152200	Weak transcription	Primary T cells from cord blood	blood
21	chr15:42142600-42155800	Weak transcription	Fetal Intestine Small	intestine
22	chr15:42143000-42159600	Weak transcription	HUVEC	blood vessel
23	chr15:42143600-42165200	Weak transcription	Pancreas	Pancrea
24	chr15:42144400-42152400	Weak transcription	Lung	lung
25	chr15:42144600-42149400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
26	chr15:42144800-42150800	Weak transcription	Esophagus	oesophagus
27	chr15:42146000-42147800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr15:42146400-42148600	Enhancers	Fetal Muscle Leg	muscle
29	chr15:42146800-42148000	Bivalent Enhancer	Fetal Stomach	stomach
30	chr15:42146800-42148600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr15:42147000-42148000	Enhancers	Fetal Thymus	thymus
32	chr15:42147000-42148000	Enhancers	Gastric	stomach
33	chr15:42147000-42148800	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr15:42147200-42148200	Enhancers	Fetal Lung	lung
35	chr15:42147200-42148600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr15:42147400-42147800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr15:42147400-42147800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr15:42147400-42147800	Enhancers	NH-A	brain
39	chr15:42147400-42148200	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr15:42147400-42148200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr15:42147400-42148200	Weak transcription	Fetal Kidney	kidney
42	chr15:42147400-42148600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr15:42147400-42148600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
44	chr15:42147400-42148800	Enhancers	H1 Cell Line	embryonic stem cell
45	chr15:42147400-42158800	Weak transcription	Right Ventricle	heart
46	chr15:42147600-42147800	Enhancers	HUES48 Cell Line	embryonic stem cell
47	chr15:42147600-42147800	Enhancers	iPS-20b Cell Line	embryonic stem cell
48	chr15:42147600-42148000	Enhancers	ES-I3 Cell Line	embryonic stem cell
49	chr15:42147600-42148000	Enhancers	Cortex derived primary cultured neurospheres	brain
50	chr15:42147600-42148400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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