Variant report

Variant	nsv904129
Chromosome Location	chr15:42162957-42207905
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1025)
CpG islands
(count:1407)
Chromatin interactive
region (count:52)
LncRNA
region (count:30)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1025 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr15:42189610-42189967	GM12878	blood:	n/a	n/a
2	ATF2	chr15:42196708-42197014	GM12878	blood:	n/a	n/a
3	ATF2	chr15:42186885-42187315	GM12878	blood:	n/a	n/a
4	ATF3	chr15:42187005-42187159	K562	blood:	n/a	n/a
5	BACH1	chr15:42196725-42197064	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr15:42174187-42174314	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr15:42186963-42187346	GM12878	blood:	n/a	chr15:42187113-42187124 chr15:42187114-42187124
8	BATF	chr15:42187016-42187237	GM12878	blood:	n/a	chr15:42187113-42187124 chr15:42187114-42187124
9	BCL3	chr15:42186968-42187472	GM12878	blood:	n/a	n/a
10	BCLAF1	chr15:42186868-42187379	GM12878	blood:	n/a	n/a
11	BHLHE40	chr15:42196757-42197089	GM12878	blood:	n/a	n/a
12	BHLHE40	chr15:42174084-42174352	K562	blood:	n/a	n/a
13	BHLHE40	chr15:42196799-42197103	K562	blood:	n/a	n/a
14	BHLHE40	chr15:42171644-42171902	K562	blood:	n/a	chr15:42171770-42171779 chr15:42171764-42171785 chr15:42171768-42171781 chr15:42171770-42171779 chr15:42171771-42171780
15	BHLHE40	chr15:42187157-42187530	K562	blood:	n/a	n/a
16	BHLHE40	chr15:42186993-42187298	GM12878	blood:	n/a	n/a
17	BRCA1	chr15:42196808-42197025	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr15:42187447-42187552	HepG2	liver:	n/a	n/a
19	CBX3	chr15:42198375-42198741	K562	blood:	n/a	n/a
20	CBX3	chr15:42174034-42174388	K562	blood:	n/a	n/a
21	CCNT2	chr15:42187001-42187250	K562	blood:	n/a	n/a
22	CCNT2	chr15:42196935-42197135	K562	blood:	n/a	n/a
23	CEBPB	chr15:42162931-42163210	IMR90	lung:	n/a	n/a
24	CEBPB	chr15:42187373-42187588	Hela-S3	cervix:	n/a	n/a
25	CEBPB	chr15:42202122-42202135	HepG2	liver:	n/a	n/a
26	CEBPB	chr15:42174115-42174137	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr15:42207626-42207912	HepG2	liver:	n/a	n/a
28	CHD2	chr15:42187127-42187250	HepG2	liver:	n/a	n/a
29	CHD2	chr15:42174199-42174290	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD2	chr15:42196763-42197029	GM12878	blood:	n/a	n/a
31	CHD2	chr15:42196715-42197055	H1-hESC	embryonic stem cell:	n/a	n/a
32	CHD2	chr15:42196936-42197089	HepG2	liver:	n/a	n/a
33	CHD2	chr15:42196745-42197031	Hela-S3	cervix:	n/a	n/a
34	CTCF	chr15:42169237-42169343	NHEK	skin:	n/a	n/a
35	CTCF	chr15:42186940-42187090	HRE	kidney:	n/a	n/a
36	CTCF	chr15:42196778-42197045	H1-hESC	embryonic stem cell:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
37	CTCF	chr15:42187488-42187491	NHEK	skin:	n/a	n/a
38	CTCF	chr15:42196860-42197010	GM12871	blood:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
39	CTCF	chr15:42197280-42197430	GM12864	blood:	n/a	n/a
40	CTCF	chr15:42186380-42186530	HMEC	breast:	n/a	n/a
41	CTCF	chr15:42186640-42186790	AG04449	skin:	n/a	n/a
42	CTCF	chr15:42197163-42197267	GM10248	blood:	n/a	n/a
43	CTCF	chr15:42197320-42197470	K562	blood:	n/a	n/a
44	CTCF	chr15:42186960-42187110	HMEC	breast:	n/a	n/a
45	CTCF	chr15:42196840-42196990	HA-sp	spinal cord:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
46	CTCF	chr15:42186960-42187110	HCM	heart:	n/a	n/a
47	CTCF	chr15:42196820-42196970	AG04449	skin:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909
48	CTCF	chr15:42196700-42196850	A549	lung:	n/a	n/a
49	CTCF	chr15:42174175-42174261	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr15:42196840-42196990	HPF	lung:	n/a	chr15:42196861-42196870 chr15:42196889-42196910 chr15:42196894-42196912 chr15:42196896-42196909

(count:1407 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:42197055-42197105	MCF10A-Er-Src	breast:	n/a
2	chr15:42187649-42187699	AG09319	gingival:	n/a
3	chr15:42190730-42190780	NH-A	brain:	n/a
4	chr15:42187649-42187699	BE2_C	brain:	n/a
5	chr15:42197055-42197105	MCF10A-Er-Src	breast:	n/a
6	chr15:42187649-42187699	AG09319	gingival:	n/a
7	chr15:42190730-42190780	NH-A	brain:	n/a
8	chr15:42187649-42187699	BE2_C	brain:	n/a
9	chr15:42193157-42193207	SAEC	small airway:	n/a
10	chr15:42186473-42186523	HIPEpiC	eye:	n/a
11	chr15:42174085-42174135	IMR90	lung:	fetal
12	chr15:42174085-42174135	Hela-S3	cervix:	n/a
13	chr15:42185659-42185709	HUVEC	blood vessel:	n/a
14	chr15:42193112-42193162	ProgFib	skin:	n/a
15	chr15:42174516-42174566	NT2-D1	testis:	n/a
16	chr15:42173869-42173919	AG09319	gingival:	n/a
17	chr15:42178365-42178415	HL-60	blood:	n/a
18	chr15:42174085-42174135	HL-60	blood:	n/a
19	chr15:42174085-42174135	NB4	blood:	n/a
20	chr15:42178365-42178415	Caco-2	colon:	n/a
21	chr15:42174934-42174984	T-47D	breast:	n/a
22	chr15:42193477-42193527	Caco-2	colon:	n/a
23	chr15:42193157-42193207	U87	brain:	n/a
24	chr15:42186473-42186523	ECC-1	luminal epithelium:	n/a
25	chr15:42192297-42192347	CMK	blood:	n/a
26	chr15:42186377-42186427	IMR90	lung:	fetal
27	chr15:42193112-42193162	RPTEC	kidney:	n/a
28	chr15:42186945-42186995	HCT-116	colon:	n/a
29	chr15:42185659-42185709	NHDF-neo	bronchial:	n/a
30	chr15:42174085-42174135	AG04449	skin:	fetal
31	chr15:42186377-42186427	HPAEpiC	pulmonary alveolar:	n/a
32	chr15:42187036-42187086	PFSK-1	brain:	n/a
33	chr15:42186830-42186880	HCM	heart:	n/a
34	chr15:42170125-42170175	AoSMC	blood vessel:	n/a
35	chr15:42178365-42178415	GM12892	blood:	n/a
36	chr15:42193157-42193207	NB4	blood:	n/a
37	chr15:42187649-42187699	HCPEpiC	choroid plexus:	n/a
38	chr15:42174085-42174135	HepG2	liver:	n/a
39	chr15:42178365-42178415	SK-N-MC	brain:	n/a
40	chr15:42193112-42193162	GM19239	blood:	n/a
41	chr15:42193157-42193207	HRPEpiC	eye:	n/a
42	chr15:42197055-42197105	SK-N-SH_RA	brain:	n/a
43	chr15:42197055-42197105	H1-hESC	embryonic stem cell:	embryo
44	chr15:42186830-42186880	HAEpiC	amniotic membrane:	n/a
45	chr15:42174516-42174566	NHDF-neo	bronchial:	n/a
46	chr15:42186377-42186427	SK-N-MC	brain:	n/a
47	chr15:42185659-42185709	T-47D	breast:	n/a
48	chr15:42186124-42186174	BE2_C	brain:	n/a
49	chr15:42174085-42174135	CMK	blood:	n/a
50	chr15:42173869-42173919	HRE	kidney:	n/a

(count:52 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:42196907..42199684-chr15:42201909..42205293,3	K562	blood:
2	chr15:42200541..42203413-chr15:42204605..42206886,2	K562	blood:
3	chr15:42190524..42192250-chr15:42192419..42194195,2	K562	blood:
4	chr15:42169351..42171668-chr15:42175525..42178438,2	K562	blood:
5	chr15:42207550..42209850-chr15:42209914..42212582,2	MCF-7	breast:
6	chr15:42196472..42197471-chr15:42376282..42376802,2	K562	blood:
7	chr15:42130119..42131750-chr15:42192349..42194959,2	K562	blood:
8	chr15:42067124..42069819-chr15:42188780..42190537,2	K562	blood:
9	chr15:42065473..42068140-chr15:42193674..42195724,2	K562	blood:
10	chr15:42184791..42187118-chr15:42195366..42196977,2	K562	blood:
11	chr15:42158306..42160718-chr15:42164813..42167241,2	K562	blood:
12	chr15:42176708..42178291-chr15:42195146..42197616,2	K562	blood:
13	chr15:42157610..42159753-chr15:42169357..42171774,2	K562	blood:
14	chr15:42169351..42171668-chr15:42175525..42178438,2	K562	blood:
15	chr15:42185754..42187828-chr15:42203844..42205813,2	K562	blood:
16	chr15:42165119..42167610-chr15:42168028..42170441,2	K562	blood:
17	chr15:42182721..42185354-chr15:42206031..42208454,3	K562	blood:
18	chr15:42203961..42205680-chr15:42206094..42208991,2	K562	blood:
19	chr15:42113647..42116612-chr15:42164861..42166819,2	K562	blood:
20	chr15:42064627..42065588-chr15:42196454..42197410,5	K562	blood:
21	chr15:42158957..42162002-chr15:42162445..42164349,3	K562	blood:
22	chr15:42165119..42167610-chr15:42168028..42170441,2	K562	blood:
23	chr15:42188931..42191610-chr15:42197982..42199883,2	K562	blood:
24	chr15:42170088..42170778-chr15:42196301..42197330,4	K562	blood:
25	chr15:42203961..42205680-chr15:42206094..42208991,2	K562	blood:
26	chr15:42194241..42196970-chr15:42258249..42260328,2	K562	blood:
27	chr15:42176708..42178291-chr15:42195146..42197616,2	K562	blood:
28	chr15:42200852..42203519-chr15:42209900..42211491,2	K562	blood:
29	chr15:42170088..42170778-chr15:42196301..42197330,4	K562	blood:
30	chr15:42169311..42172233-chr15:42179875..42182296,2	MCF-7	breast:
31	chr15:42190524..42192250-chr15:42192419..42194195,2	K562	blood:
32	chr15:41895978..41896965-chr15:42196438..42197404,2	MCF-7	breast:
33	chr15:42175250..42178134-chr15:42183992..42185929,2	K562	blood:
34	chr15:42161749..42164625-chr15:42167618..42170271,3	K562	blood:
35	chr15:42114988..42115997-chr15:42196197..42197506,6	MCF-7	breast:
36	chr15:42181594..42183460-chr15:42186970..42189193,2	K562	blood:
37	chr15:42157479..42160214-chr15:42160930..42163117,2	MCF-7	breast:
38	chr15:42179476..42182408-chr15:42189392..42190926,2	K562	blood:
39	chr15:42161749..42164625-chr15:42167618..42170271,3	K562	blood:
40	chr15:42179476..42182408-chr15:42189392..42190926,2	K562	blood:
41	chr15:42180442..42182824-chr15:42195792..42198246,2	K562	blood:
42	chr15:42200541..42203413-chr15:42204605..42206886,2	K562	blood:
43	chr15:42066376..42067229-chr15:42196456..42197004,2	K562	blood:
44	chr15:42130329..42131971-chr15:42170676..42172452,2	K562	blood:
45	chr15:42146846..42149806-chr15:42162512..42164389,2	K562	blood:
46	chr15:42115008..42115577-chr15:42196451..42197341,2	MCF-7	breast:
47	chr15:42180442..42182824-chr15:42195792..42198246,2	K562	blood:
48	chr15:42148784..42150939-chr15:42202289..42204151,2	MCF-7	breast:
49	chr15:42196907..42199684-chr15:42201909..42205293,3	K562	blood:
50	chr15:42184589..42187118-chr15:42195366..42198157,2	K562	blood:

(count:30 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-JMJD7-PLA2G4B-2	chr15:42187778-42188134	NONHSAT041977
2	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42191025	NONHSAT041984
3	lnc-JMJD7-PLA2G4B-1	chr15:42187980-42188141	ENSG00000174171.3
4	lnc-JMJD7-PLA2G4B-1	chr15:42189527-42189585	ENSG00000174171.3
5	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42191029	NONHSAT041980
6	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42190773	ENSG00000260556.1
7	lnc-JMJD7-PLA2G4B-2	chr15:42189297-42190432	NONHSAT041985
8	lnc-JMJD7-PLA2G4B-2	chr15:42184991-42185019	ENSG00000174171.4
9	lnc-JMJD7-PLA2G4B-1	chr15:42184991-42185019	ENSG00000174171.3
10	lnc-JMJD7-PLA2G4B-2	chr15:42190708-42192352	NONHSAT041985
11	lnc-JMJD7-PLA2G4B-2	chr15:42189527-42189586	ENSG00000174171.4
12	lnc-JMJD7-PLA2G4B-1	chr15:42187183-42188141	ENSG00000174171.3
13	lnc-JMJD7-PLA2G4B-1	chr15:42187383-42187534	ENSG00000174171.3
14	lnc-JMJD7-PLA2G4B-2	chr15:42189463-42189719	NONHSAT041980
15	lnc-JMJD7-PLA2G4B-2	chr15:42185255-42185276	NONHSAT041981
16	lnc-JMJD7-PLA2G4B-1	chr15:42187778-42188133	ENSG00000174171.3
17	lnc-SPTBN5-3	chr15:42188137-42189031	ENSG00000272003.1
18	lnc-JMJD7-PLA2G4B-2	chr15:42189688-42189719	ENSG00000260556.1
19	lnc-JMJD7-PLA2G4B-2	chr15:42185134-42186566	NONHSAT041977
20	lnc-JMJD7-PLA2G4B-2	chr15:42184974-42185276	NONHSAT041976
21	lnc-JMJD7-PLA2G4B-2	chr15:42187721-42188135	NONHSAT041976
22	lnc-JMJD7-PLA2G4B-2	chr15:42190365-42190773	ENSG00000174171.4
23	lnc-JMJD7-PLA2G4B-2	chr15:42187778-42188079	NONHSAT041981
24	lnc-SPTBN5-4	chr15:42191630-42192208	NONHSAT041986
25	lnc-JMJD7-PLA2G4B-2	chr15:42185242-42185276	NONHSAT041980
26	lnc-JMJD7-PLA2G4B-2	chr15:42188198-42189719	NONHSAT041984
27	lnc-JMJD7-PLA2G4B-2	chr15:42189689-42189719	ENSG00000174171.4
28	lnc-JMJD7-PLA2G4B-1	chr15:42187782-42187867	ENSG00000174171.3
29	lnc-JMJD7-PLA2G4B-2	chr15:42184987-42185019	NONHSAT041977
30	lnc-JMJD7-PLA2G4B-1	chr15:42184991-42187534	ENSG00000174171.3

No data

Variant related genes	Relation type
MIR4310	TF binding region
SPTBN5	TF binding region
ENSG00000272003	TF binding region
ENSG00000174171	TF binding region
MIR4310	CpG island
SPTBN5	CpG island
ENSG00000272003	CpG island
ENSG00000174171	CpG island
ENSG00000264850	chromatin interactions
ENSG00000137802	chromatin interactions
ENSG00000243708	chromatin interactions
ENSG00000174171	chromatin interactions
ENSG00000137877	chromatin interactions
ENSG00000272003	chromatin interactions
ENSG00000260814	chromatin interactions

Extended variants
information (count: 2044 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:2044 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs890509	chr15:42162957-42162958	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs566924854	chr15:42163046-42163047	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs111832578	chr15:42163069-42163070	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs552538148	chr15:42163118-42163119	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs569195958	chr15:42163136-42163137	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs78066720	chr15:42163163-42163164	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs568446544	chr15:42163198-42163199	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs557318420	chr15:42163249-42163250	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs575900002	chr15:42163262-42163263	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs574006191	chr15:42163266-42163267	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs113485261	chr15:42163267-42163268	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs77353363	chr15:42163362-42163363	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs572849503	chr15:42163438-42163439	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs377456144	chr15:42163453-42163454	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs564888862	chr15:42163476-42163477	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs371041608	chr15:42163477-42163478	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs544483889	chr15:42163497-42163498	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs561221516	chr15:42163518-42163519	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs143172699	chr15:42163539-42163540	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs184846321	chr15:42163560-42163561	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs116522704	chr15:42163561-42163562	Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs188515033	chr15:42163622-42163623	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs368567144	chr15:42163638-42163639	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs552422516	chr15:42163648-42163649	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs569210387	chr15:42163663-42163664	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs181607468	chr15:42163711-42163712	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs548617846	chr15:42163756-42163757	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs369729558	chr15:42163764-42163765	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs567525248	chr15:42163784-42163785	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs56023611	chr15:42163845-42163846	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs536553304	chr15:42163862-42163863	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs529764325	chr15:42163873-42163874	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs539177346	chr15:42163903-42163904	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs572995910	chr15:42163905-42163906	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs373605518	chr15:42163953-42163954	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs538712350	chr15:42163954-42163955	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs558397780	chr15:42164045-42164046	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201503588	chr15:42164051-42164052	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs575019714	chr15:42164058-42164059	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs543773593	chr15:42164069-42164070	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs200195499	chr15:42164078-42164079	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs574747486	chr15:42164095-42164096	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs367655667	chr15:42164097-42164098	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs199701887	chr15:42164110-42164111	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs372660103	chr15:42164114-42164115	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs540562947	chr15:42164117-42164118	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs8024419	chr15:42164123-42164124	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs532620976	chr15:42164134-42164135	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs546397712	chr15:42164149-42164150	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs562806272	chr15:42164161-42164162	Genic enhancers Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	20164920	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Cancer	21129771	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21045282	CNVD
Breast cancer	22032731	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Myelofibrosis	22110671	CNVD
Maculopathy	20981449	CNVD
Gastric adenocarcinoma	19115996	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1667 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:42138200-42173400	Weak transcription	Right Atrium	heart
2	chr15:42141200-42191200	Weak transcription	Aorta	Aorta
3	chr15:42141600-42163000	Weak transcription	Left Ventricle	heart
4	chr15:42143600-42165200	Weak transcription	Pancreas	Pancrea
5	chr15:42148200-42174400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr15:42153200-42168600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
7	chr15:42155400-42167200	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr15:42155800-42168400	Weak transcription	Lung	lung
9	chr15:42157400-42179200	Weak transcription	HSMMtube	muscle
10	chr15:42159400-42168800	Weak transcription	Fetal Intestine Small	intestine
11	chr15:42160200-42172600	Weak transcription	HUVEC	blood vessel
12	chr15:42161600-42163400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr15:42161600-42163600	Enhancers	Esophagus	oesophagus
14	chr15:42161600-42163600	Enhancers	NHEK	skin
15	chr15:42161600-42163800	Enhancers	Adipose Nuclei	Adipose
16	chr15:42161800-42163800	Enhancers	Primary T cells from cord blood	blood
17	chr15:42161800-42163800	Enhancers	Fetal Thymus	thymus
18	chr15:42161800-42164200	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr15:42161800-42164600	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr15:42161800-42165800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr15:42162200-42163600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr15:42162200-42163800	Enhancers	NH-A	brain
23	chr15:42162200-42165600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr15:42162400-42163600	Enhancers	Primary T cells fromperipheralblood	blood
25	chr15:42162400-42163800	Enhancers	Primary T helper cells PMA-I stimulated	--
26	chr15:42162400-42163800	Enhancers	Right Ventricle	heart
27	chr15:42162400-42164600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr15:42162400-42166200	Weak transcription	Fetal Muscle Leg	muscle
29	chr15:42162400-42168400	Weak transcription	Gastric	stomach
30	chr15:42162600-42163200	Enhancers	Placenta Amnion	Placenta Amnion
31	chr15:42162600-42163400	Enhancers	Primary T helper naive cells from peripheral blood	blood
32	chr15:42162600-42163400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
33	chr15:42162600-42163400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
34	chr15:42162600-42163400	Enhancers	Ovary	ovary
35	chr15:42162600-42163600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
36	chr15:42162600-42163600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
37	chr15:42162600-42164000	Enhancers	Muscle Satellite Cultured Cells	--
38	chr15:42162800-42163200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr15:42162800-42163400	Enhancers	Liver	Liver
40	chr15:42162800-42163400	Enhancers	Spleen	Spleen
41	chr15:42162800-42163400	Enhancers	Osteobl	bone
42	chr15:42162800-42163600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
43	chr15:42162800-42163600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr15:42162800-42163600	Enhancers	HSMM	muscle
45	chr15:42162800-42163800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
46	chr15:42163000-42163400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
47	chr15:42163000-42163800	Enhancers	Left Ventricle	heart
48	chr15:42163000-42163800	Enhancers	NHLF	lung
49	chr15:42163200-42163400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
50	chr15:42163200-42174000	Weak transcription	Placenta Amnion	Placenta Amnion

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