Variant report

Variant	nsv904212
Chromosome Location	chr15:50979738-51132170
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1453)
CpG islands
(count:1100)
Chromatin interactive
region (count:188)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1453 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:51045651-51046001	K562	blood:	n/a	n/a
2	ARID3A	chr15:51121016-51121299	K562	blood:	n/a	n/a
3	ARID3A	chr15:51056430-51057534	K562	blood:	n/a	n/a
4	ARID3A	chr15:51058735-51059038	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:51069432-51069509	HepG2	liver:	n/a	n/a
6	ARID3A	chr15:51010694-51011343	HepG2	liver:	n/a	n/a
7	ARID3A	chr15:51110747-51110790	K562	blood:	n/a	n/a
8	ARID3A	chr15:50989668-50989868	HepG2	liver:	n/a	n/a
9	ARID3A	chr15:51057083-51058225	HepG2	liver:	n/a	n/a
10	ARID3A	chr15:51057958-51058011	K562	blood:	n/a	n/a
11	ARID3A	chr15:51102246-51102334	HepG2	liver:	n/a	n/a
12	ARID3A	chr15:51059347-51059688	HepG2	liver:	n/a	n/a
13	ARID3A	chr15:51056462-51056754	HepG2	liver:	n/a	n/a
14	ATF1	chr15:51090944-51091269	K562	blood:	n/a	n/a
15	ATF1	chr15:51121048-51121413	K562	blood:	n/a	n/a
16	ATF1	chr15:51045773-51045996	K562	blood:	n/a	n/a
17	ATF2	chr15:51057209-51058191	GM12878	blood:	n/a	n/a
18	ATF3	chr15:51057123-51057710	A549	lung:	n/a	n/a
19	ATF3	chr15:51045700-51045997	K562	blood:	n/a	n/a
20	ATF3	chr15:51010917-51011262	HepG2	liver:	n/a	n/a
21	ATF3	chr15:51057183-51057646	K562	blood:	n/a	n/a
22	ATF3	chr15:51090913-51091271	K562	blood:	n/a	n/a
23	BACH1	chr15:51121124-51121381	H1-hESC	embryonic stem cell:	n/a	n/a
24	BCL11A	chr15:51057810-51058299	GM12878	blood:	n/a	chr15:51058009-51058022
25	BCL3	chr15:51090917-51091281	GM12878	blood:	n/a	n/a
26	BCL3	chr15:51057102-51058408	A549	lung:	n/a	chr15:51058009-51058022 chr15:51057801-51057814
27	BCL3	chr15:51057076-51058175	A549	lung:	n/a	chr15:51058009-51058022 chr15:51057801-51057814
28	BCLAF1	chr15:51056598-51057205	GM12878	blood:	n/a	n/a
29	BCLAF1	chr15:51057573-51058194	GM12878	blood:	n/a	chr15:51058009-51058022 chr15:51057801-51057814
30	BHLHE40	chr15:51010851-51011221	HepG2	liver:	n/a	n/a
31	BHLHE40	chr15:50978064-50979738	K562	blood:	n/a	chr15:50979045-50979054 chr15:50979044-50979057 chr15:50978822-50978838 chr15:50979046-50979055 chr15:50978960-50978976
32	BHLHE40	chr15:51010956-51011169	GM12878	blood:	n/a	n/a
33	BHLHE40	chr15:51121114-51121310	K562	blood:	n/a	n/a
34	BHLHE40	chr15:51010979-51011241	HepG2	liver:	n/a	n/a
35	BHLHE40	chr15:50979944-50980072	K562	blood:	n/a	n/a
36	BHLHE40	chr15:51056542-51057226	GM12878	blood:	n/a	n/a
37	BHLHE40	chr15:51066644-51067308	K562	blood:	n/a	n/a
38	BHLHE40	chr15:50977862-50979784	GM12878	blood:	n/a	chr15:50979045-50979054 chr15:50979044-50979057 chr15:50978822-50978838 chr15:50979046-50979055 chr15:50978960-50978976
39	BHLHE40	chr15:51058775-51059006	HepG2	liver:	n/a	n/a
40	BHLHE40	chr15:51057125-51058312	K562	blood:	n/a	n/a
41	BHLHE40	chr15:51010809-51011334	HepG2	liver:	n/a	n/a
42	BRCA1	chr15:51057677-51057834	HepG2	liver:	n/a	n/a
43	BRCA1	chr15:51108340-51108820	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr15:51045608-51045972	Hela-S3	cervix:	n/a	n/a
45	BRCA1	chr15:50978339-50979870	Hela-S3	cervix:	n/a	n/a
46	BRCA1	chr15:51058134-51058305	HepG2	liver:	n/a	n/a
47	CBX3	chr15:51090131-51090504	HCT-116	colon:	n/a	n/a
48	CBX3	chr15:51057190-51057517	K562	blood:	n/a	n/a
49	CBX3	chr15:51057024-51058404	K562	blood:	n/a	n/a
50	CBX3	chr15:50978109-50979754	K562	blood:	n/a	n/a

(count:1100 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:51058014-51058064	ECC-1	luminal epithelium:	n/a
2	chr15:51104216-51104266	AoSMC	blood vessel:	n/a
3	chr15:51058014-51058064	ECC-1	luminal epithelium:	n/a
4	chr15:51104216-51104266	AoSMC	blood vessel:	n/a
5	chr15:51115739-51115789	HPAEpiC	pulmonary alveolar:	n/a
6	chr15:51058014-51058064	BJ	skin:	n/a
7	chr15:51057714-51057764	ProgFib	skin:	n/a
8	chr15:51104216-51104266	U87	brain:	n/a
9	chr15:51058014-51058064	GM12891	blood:	n/a
10	chr15:51044672-51044722	CMK	blood:	n/a
11	chr15:50982364-50982414	A549	lung:	n/a
12	chr15:51104216-51104266	HCT-116	colon:	n/a
13	chr15:51058035-51058085	BE2_C	brain:	n/a
14	chr15:51058014-51058064	MCF10A-Er-Src	breast:	n/a
15	chr15:51058114-51058164	HCT-116	colon:	n/a
16	chr15:51058084-51058134	HCPEpiC	choroid plexus:	n/a
17	chr15:51057768-51057818	HCPEpiC	choroid plexus:	n/a
18	chr15:50982364-50982414	HRPEpiC	eye:	n/a
19	chr15:51115739-51115789	SK-N-MC	brain:	n/a
20	chr15:51058035-51058085	HNPCEpiC	eye:	n/a
21	chr15:51054077-51054127	HPAEpiC	pulmonary alveolar:	n/a
22	chr15:51115739-51115789	PANC-1	pancreas:	n/a
23	chr15:51058042-51058092	A549	lung:	n/a
24	chr15:51058014-51058064	HIPEpiC	eye:	n/a
25	chr15:51058084-51058134	Caco-2	colon:	n/a
26	chr15:51058114-51058164	NHBE	bronchial:	n/a
27	chr15:50982364-50982414	GM06990	blood:	n/a
28	chr15:51056548-51056598	GM12878	blood:	n/a
29	chr15:51057714-51057764	CMK	blood:	n/a
30	chr15:51057859-51057909	RPTEC	kidney:	n/a
31	chr15:50982364-50982414	Hela-S3	cervix:	n/a
32	chr15:51104216-51104266	SK-N-SH_RA	brain:	n/a
33	chr15:50982364-50982414	HCPEpiC	choroid plexus:	n/a
34	chr15:51056548-51056598	CMK	blood:	n/a
35	chr15:50982364-50982414	NHDF-neo	bronchial:	n/a
36	chr15:51058050-51058100	GM19239	blood:	n/a
37	chr15:50982364-50982414	SK-N-SH	brain:	n/a
38	chr15:51058100-51058150	HRPEpiC	eye:	n/a
39	chr15:51058050-51058100	MCF10A-Er-Src	breast:	n/a
40	chr15:51057714-51057764	GM12892	blood:	n/a
41	chr15:51058114-51058164	RPTEC	kidney:	n/a
42	chr15:51058114-51058164	GM06990	blood:	n/a
43	chr15:51057859-51057909	AG04450	lung:	fetal
44	chr15:51057859-51057909	AoSMC	blood vessel:	n/a
45	chr15:51115739-51115789	ProgFib	skin:	n/a
46	chr15:51058114-51058164	NH-A	brain:	n/a
47	chr15:50982364-50982414	K562	blood:	n/a
48	chr15:51058100-51058150	HCPEpiC	choroid plexus:	n/a
49	chr15:51057859-51057909	GM12891	blood:	n/a
50	chr15:51057417-51057467	RPTEC	kidney:	n/a

(count:188 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr15:50982616..50983161-chr15:51070119..51071029,2	MCF-7	breast:
2	chr15:51056515..51059362-chr15:51088829..51092887,6	MCF-7	breast:
3	chr15:51055645..51061545-chr15:51065338..51070883,9	MCF-7	breast:
4	chr15:50977199..50981459-chr15:51198510..51202863,6	K562	blood:
5	chr15:51045886..51047999-chr15:51058293..51060374,2	K562	blood:
6	chr15:51056930..51057470-chr15:51070200..51070963,2	MCF-7	breast:
7	chr15:51080266..51082238-chr17:56734970..56736664,2	MCF-7	breast:
8	chr10:104155402..104156225-chr15:51057321..51058119,2	Hela-S3	cervix:
9	chr15:50978318..50980031-chr15:51108674..51110331,2	MCF-7	breast:
10	chr15:50986980..50988532-chr15:50991863..50994850,2	MCF-7	breast:
11	chr15:51039545..51042117-chr15:51054834..51058033,5	MCF-7	breast:
12	chr15:51057767..51058453-chr5:32174404..32175249,2	Hela-S3	cervix:
13	chr15:51039307..51042785-chr15:51044008..51048436,3	MCF-7	breast:
14	chr15:50978732..50980573-chr15:51017236..51021857,4	K562	blood:
15	chr15:51117159..51119186-chr15:51119416..51121611,3	MCF-7	breast:
16	chr15:50645819..50647987-chr15:50977616..50981646,3	MCF-7	breast:
17	chr15:51056915..51057629-chr15:51070050..51070613,2	MCF-7	breast:
18	chr15:51056319..51059244-chr15:51115290..51117379,3	MCF-7	breast:
19	chr15:51040134..51042718-chr15:51055883..51057595,3	K562	blood:
20	chr15:51037199..51038791-chr15:51054779..51056301,2	K562	blood:
21	chr15:51023962..51026987-chr15:51030777..51033771,3	MCF-7	breast:
22	chr15:51069319..51071729-chr15:51072874..51075260,2	MCF-7	breast:
23	chr15:51001094..51002906-chr15:51005312..51007726,2	MCF-7	breast:
24	chr15:50977470..50980168-chr15:51041572..51044508,3	MCF-7	breast:
25	chr15:50987126..50989767-chr15:51018263..51019969,2	MCF-7	breast:
26	chr15:50982548..50983158-chr15:51146956..51147497,2	MCF-7	breast:
27	chr15:50977840..50980461-chr15:50992253..50996355,4	MCF-7	breast:
28	chr15:51036668..51038336-chr15:51056622..51058914,2	MCF-7	breast:
29	chr15:51000299..51003362-chr15:51056520..51058817,3	MCF-7	breast:
30	chr15:50978465..50980068-chr15:51103686..51105331,2	MCF-7	breast:
31	chr11:62608308..62609295-chr15:51057415..51058362,2	MCF-7	breast:
32	chr15:51069319..51071729-chr15:51072874..51075260,2	MCF-7	breast:
33	chr15:51110106..51113018-chr15:51115605..51118067,2	K562	blood:
34	chr15:50990590..50993548-chr15:51161055..51163401,2	MCF-7	breast:
35	chr15:51056091..51061159-chr15:51107004..51114924,11	MCF-7	breast:
36	chr15:50987564..50989809-chr15:51045515..51047081,2	MCF-7	breast:
37	chr15:51101484..51104365-chr15:51107028..51109009,2	K562	blood:
38	chr15:50976373..50980530-chr15:50988213..50991121,4	MCF-7	breast:
39	chr15:51123963..51125552-chr15:51144556..51147356,2	MCF-7	breast:
40	chr15:51056915..51057558-chr15:51070113..51070977,2	MCF-7	breast:
41	chr15:51041164..51042911-chr3:63118957..63121268,2	MCF-7	breast:
42	chr15:50993045..50995132-chr15:51007802..51009829,2	MCF-7	breast:
43	chr15:51001094..51002906-chr15:51005312..51007726,2	MCF-7	breast:
44	chr15:51039062..51042009-chr15:51057876..51060168,3	MCF-7	breast:
45	chr15:50997913..51000096-chr15:51002715..51004859,2	MCF-7	breast:
46	chr15:51057477..51058067-chr2:70313021..70313598,2	NB4	blood:
47	chr15:50978986..50980985-chr15:50987046..50989888,2	MCF-7	breast:
48	chr15:50977048..50978856-chr15:51005682..51008712,3	K562	blood:
49	chr15:51055767..51057855-chr19:39899197..39901640,2	MCF-7	breast:
50	chr15:50997781..50999367-chr15:51000432..51002610,2	MCF-7	breast:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AP4E1-5	chr15:51090867-51091148	NONHSAT042437
2	lnc-TRPM7-3	chr15:51034900-51035473	NONHSAT042435
3	lnc-SPPL2A.1-1	chr15:51132073-51133953	ENSG00000247586
4	lnc-TRPM7-2	chr15:51014370-51014398	NONHSAT042433
5	lnc-TRPM7-2	chr15:51017418-51017716	NONHSAT042433
6	lnc-AP4E1-1	chr15:51041845-51042026	ENSG00000259773.1
7	lnc-TRPM7-1	chr15:51025117-51025495	ENSG00000250395
8	lnc-SPPL2A.1-1	chr15:51132073-51133953	XLOC_011476
9	lnc-AP4E1-1	chr15:51038906-51039027	ENSG00000259773.1
10	lnc-USP8-4	chr15:50981097-50981388	NONHSAT042431

No data

Variant related genes	Relation type
RN7SL354P	TF binding region
ENSG00000241130	TF binding region
TRPM7	TF binding region
ENSG00000259773	TF binding region
SPPL2A	TF binding region
RN7SL354P	CpG island
ENSG00000241130	CpG island
TRPM7	CpG island
ENSG00000259773	CpG island
SPPL2A	CpG island
ENSG00000167987	chromatin interactions
ENSG00000100348	chromatin interactions
ENSG00000154429	chromatin interactions
ENSG00000272086	chromatin interactions
ENSG00000198366	chromatin interactions
ENSG00000244879	chromatin interactions
ENSG00000179818	chromatin interactions
ENSG00000138600	chromatin interactions
ENSG00000196176	chromatin interactions
ENSG00000078487	chromatin interactions
ENSG00000112874	chromatin interactions
ENSG00000264109	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000259715	chromatin interactions
ENSG00000146834	chromatin interactions
ENSG00000081014	chromatin interactions
ENSG00000092439	chromatin interactions
ENSG00000113384	chromatin interactions
ENSG00000163874	chromatin interactions
ENSG00000104064	chromatin interactions
ENSG00000077150	chromatin interactions
ENSG00000119541	chromatin interactions
ENSG00000266559	chromatin interactions
ENSG00000243027	chromatin interactions
ENSG00000201699	chromatin interactions
ENSG00000164190	chromatin interactions
ENSG00000259773	chromatin interactions
ENSG00000241130	chromatin interactions
PITPNA	miRNA target sites
HRNR	miRNA target sites

Extended variants
information (count: 5786 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:5786 , 50 per page) page: 1 2 3 4 5 6 7 ... 116

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs8027597	chr15:50979738-50979739	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs568908881	chr15:50979750-50979751	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
3	rs539476888	chr15:50979775-50979776	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs552036724	chr15:50979778-50979779	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
5	rs567017034	chr15:50979855-50979856	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs534528865	chr15:50979952-50979953	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs555633681	chr15:50979958-50979959	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs574293159	chr15:50980013-50980014	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs537927207	chr15:50980059-50980060	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs12913763	chr15:50980090-50980091	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs577688816	chr15:50980123-50980124	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs146478663	chr15:50980150-50980151	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs368242032	chr15:50980164-50980165	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs182520954	chr15:50980169-50980170	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs187223508	chr15:50980195-50980196	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs572203243	chr15:50980214-50980215	Active TSS Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs78847546	chr15:50980230-50980231	Active TSS Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs531448848	chr15:50980243-50980244	Active TSS Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs544278841	chr15:50980338-50980339	Active TSS Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs562678405	chr15:50980400-50980401	Active TSS Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs533484339	chr15:50980462-50980463	Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs77738047	chr15:50980469-50980470	Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs114752220	chr15:50980488-50980489	Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs530890951	chr15:50980493-50980494	Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs116555653	chr15:50980523-50980524	Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs141013212	chr15:50980589-50980590	Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs548663727	chr15:50980640-50980641	Weak transcription Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs570022244	chr15:50980644-50980645	Weak transcription Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs143057829	chr15:50980650-50980651	Weak transcription Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs556275751	chr15:50980668-50980669	Weak transcription Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs148217703	chr15:50980678-50980679	Weak transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs376535333	chr15:50980724-50980725	Weak transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs537264061	chr15:50980791-50980792	Weak transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs538732696	chr15:50980795-50980796	Weak transcription Enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs558820441	chr15:50980805-50980806	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs570637781	chr15:50980849-50980850	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs141229022	chr15:50980861-50980862	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs553451267	chr15:50980867-50980868	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs572050230	chr15:50980907-50980908	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs549780435	chr15:50980913-50980914	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs201223835	chr15:50980926-50980927	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs190060668	chr15:50980932-50980933	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs183041820	chr15:50980938-50980939	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs542556973	chr15:50980956-50980957	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs554472075	chr15:50981015-50981016	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs575817368	chr15:50981050-50981051	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs11630165	chr15:50981098-50981099	Weak transcription	Chromatin interactive region lncRNA	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs185271458	chr15:50981114-50981115	Weak transcription	Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
49	rs150291112	chr15:50981372-50981373	Weak transcription Enhancers	Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
50	rs137941028	chr15:50981381-50981382	Weak transcription Enhancers	Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Myelofibrosis	22110671	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2567 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:50976800-50979800	Active TSS	Right Ventricle	heart
2	chr15:50977000-50979800	Active TSS	Breast Myoepithelial Primary Cells	Breast
3	chr15:50977000-50980200	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr15:50977000-50980400	Active TSS	GM12878-XiMat	blood
5	chr15:50977200-50979800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr15:50977200-50979800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr15:50977200-50980000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr15:50977400-50979800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr15:50977400-50980400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr15:50977600-50979800	Active TSS	H9 Cell Line	embryonic stem cell
11	chr15:50977600-50979800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr15:50977600-50980000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr15:50977600-50980000	Active TSS	HSMMtube	muscle
14	chr15:50977800-50979800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
15	chr15:50977800-50979800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
16	chr15:50977800-50979800	Active TSS	Aorta	Aorta
17	chr15:50977800-50979800	Active TSS	Brain Inferior Temporal Lobe	brain
18	chr15:50977800-50979800	Active TSS	Fetal Muscle Trunk	muscle
19	chr15:50977800-50979800	Active TSS	Ovary	ovary
20	chr15:50977800-50979800	Active TSS	Psoas Muscle	Psoas
21	chr15:50977800-50980200	Active TSS	iPS-18 Cell Line	embryonic stem cell
22	chr15:50977800-50980200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr15:50978000-50979800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
24	chr15:50978200-50979800	Active TSS	Thymus	Thymus
25	chr15:50978400-50979800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
26	chr15:50978400-50979800	Active TSS	Stomach Smooth Muscle	stomach
27	chr15:50979200-50979800	Flanking Active TSS	Primary B cells from cord blood	blood
28	chr15:50979200-50979800	Flanking Active TSS	Primary hematopoietic stem cells	blood
29	chr15:50979200-50979800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
30	chr15:50979200-50979800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
31	chr15:50979200-50979800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr15:50979200-50979800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr15:50979200-50979800	Flanking Active TSS	Adipose Nuclei	Adipose
34	chr15:50979200-50979800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
35	chr15:50979200-50979800	Active TSS	Right Atrium	heart
36	chr15:50979200-50979800	Flanking Active TSS	NH-A	brain
37	chr15:50979200-50980000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr15:50979200-50980000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr15:50979200-50980000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
40	chr15:50979200-50980000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
41	chr15:50979200-50980000	Flanking Active TSS	HMEC	breast
42	chr15:50979200-50980000	Flanking Active TSS	HUVEC	blood vessel
43	chr15:50979200-50980000	Flanking Active TSS	NHEK	skin
44	chr15:50979200-50980000	Flanking Active TSS	Osteobl	bone
45	chr15:50979200-50980200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr15:50979400-50979800	Flanking Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr15:50979400-50979800	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
48	chr15:50979400-50979800	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
49	chr15:50979400-50979800	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
50	chr15:50979400-50979800	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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