Variant report

Variant nsv904229
Chromosome Location chr15:54267610-54340070
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:302 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:54267400-54269600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr15:54269200-54269400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
3 chr15:54269200-54269400 Enhancers Esophagus oesophagus
4 chr15:54269200-54269400 Enhancers Fetal Intestine Small intestine
5 chr15:54269200-54270000 Enhancers Fetal Brain Female brain
6 chr15:54269200-54270000 Enhancers Fetal Lung lung
7 chr15:54269200-54277200 Active TSS Aorta Aorta
8 chr15:54269400-54270400 Weak transcription Esophagus oesophagus
9 chr15:54269600-54269800 Enhancers Skeletal Muscle Male skeletal muscle
10 chr15:54269800-54270000 Bivalent Enhancer Brain Hippocampus Middle brain
11 chr15:54269800-54274800 Active TSS Skeletal Muscle Male skeletal muscle
12 chr15:54270000-54270200 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
13 chr15:54270000-54270200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr15:54270000-54270200 Bivalent Enhancer Brain Cingulate Gyrus brain
15 chr15:54270000-54270200 Enhancers Brain Germinal Matrix brain
16 chr15:54270000-54270200 Active TSS Duodenum Smooth Muscle Duodenum
17 chr15:54270000-54270200 Active TSS Fetal Brain Male brain
18 chr15:54270000-54270400 Flanking Active TSS Fetal Brain Female brain
19 chr15:54270000-54270600 Flanking Active TSS Fetal Lung lung
20 chr15:54270000-54270800 Bivalent/Poised TSS Brain Hippocampus Middle brain
21 chr15:54270000-54271600 Active TSS Stomach Smooth Muscle stomach
22 chr15:54270200-54270400 Bivalent Enhancer H1 Cell Line embryonic stem cell
23 chr15:54270200-54270400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr15:54270200-54270400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr15:54270200-54270400 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
26 chr15:54270200-54270400 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
27 chr15:54270200-54270400 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
28 chr15:54270200-54270400 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr15:54270200-54270400 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr15:54270200-54270400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr15:54270200-54270400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
32 chr15:54270200-54270400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
33 chr15:54270200-54270400 Active TSS Fetal Intestine Small intestine
34 chr15:54270200-54270400 Bivalent/Poised TSS Fetal Muscle Trunk muscle
35 chr15:54270200-54270400 Active TSS Fetal Muscle Leg muscle
36 chr15:54270200-54270400 Enhancers Gastric stomach
37 chr15:54270200-54270400 Enhancers Ovary ovary
38 chr15:54270200-54270400 Enhancers Pancreas Pancrea
39 chr15:54270200-54270400 Enhancers Placenta Amnion Placenta Amnion
40 chr15:54270200-54270400 Active TSS Rectal Smooth Muscle rectum
41 chr15:54270200-54270400 Active TSS A549 lung
42 chr15:54270200-54270600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
43 chr15:54270200-54270600 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
44 chr15:54270200-54270600 Flanking Active TSS Brain Anterior Caudate brain
45 chr15:54270200-54270600 Flanking Bivalent TSS/Enh Brain Cingulate Gyrus brain
46 chr15:54270200-54270600 Flanking Active TSS Brain Germinal Matrix brain
47 chr15:54270200-54270600 Flanking Active TSS Brain Inferior Temporal Lobe brain
48 chr15:54270200-54270600 Flanking Active TSS Fetal Brain Male brain
49 chr15:54270200-54270800 Active TSS Brain Substantia Nigra brain
50 chr15:54270200-54270800 Flanking Active TSS Skeletal Muscle Female skeletal muscle

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