Variant report

Variant nsv904246
Chromosome Location chr15:56665827-56732192
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:262 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56658200-56675400 Weak transcription Pancreas Pancrea
2 chr15:56658800-56669600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr15:56659400-56666800 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr15:56659600-56675400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr15:56660400-56674400 Weak transcription Hela-S3 cervix
6 chr15:56661000-56671000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr15:56661800-56668400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr15:56662000-56666800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr15:56664400-56667600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr15:56664400-56669400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr15:56664400-56669600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr15:56664400-56685200 Weak transcription Duodenum Mucosa Duodenum
13 chr15:56665200-56733400 Weak transcription Fetal Kidney kidney
14 chr15:56665800-56666000 Enhancers GM12878-XiMat blood
15 chr15:56666000-56666200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr15:56666000-56666400 Weak transcription GM12878-XiMat blood
17 chr15:56666400-56667200 ZNF genes & repeats GM12878-XiMat blood
18 chr15:56666800-56667200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
19 chr15:56666800-56667200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
20 chr15:56667200-56668400 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr15:56667200-56670400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr15:56670400-56672000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
23 chr15:56670600-56673000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
24 chr15:56670800-56671000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
25 chr15:56671000-56671200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
26 chr15:56671000-56672000 ZNF genes & repeats GM12878-XiMat blood
27 chr15:56671000-56676800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr15:56671400-56676200 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr15:56671800-56672000 ZNF genes & repeats Ovary ovary
30 chr15:56672000-56673600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr15:56672000-56694600 Weak transcription Ovary ovary
32 chr15:56672400-56674000 Weak transcription Thymus Thymus
33 chr15:56672400-56677400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr15:56673000-56678000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr15:56673200-56677000 Weak transcription Gastric stomach
36 chr15:56673400-56675800 Weak transcription Fetal Intestine Large intestine
37 chr15:56673400-56676600 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr15:56673600-56675200 ZNF genes & repeats GM12878-XiMat blood
39 chr15:56673600-56675400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
40 chr15:56673600-56675400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr15:56673800-56674000 ZNF genes & repeats Fetal Intestine Small intestine
42 chr15:56673800-56676800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr15:56674000-56675000 Strong transcription Fetal Intestine Small intestine
44 chr15:56674000-56675400 ZNF genes & repeats Fetal Stomach stomach
45 chr15:56674000-56675400 Strong transcription Thymus Thymus
46 chr15:56674200-56675000 Weak transcription Fetal Lung lung
47 chr15:56674800-56675600 Enhancers HMEC breast
48 chr15:56675000-56675200 ZNF genes & repeats Fetal Lung lung
49 chr15:56675000-56675800 Enhancers Stomach Mucosa stomach
50 chr15:56675000-56685000 Weak transcription Fetal Intestine Small intestine

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