Variant report

Variant	nsv904384
Chromosome Location	chr15:75493823-75520378
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2148)
CpG islands
(count:1405)
Chromatin interactive
region (count:80)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

(count:2148 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:75494240-75494417	HepG2	liver:	n/a	chr15:75494289-75494301
2	ARID3A	chr15:75497116-75497463	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:75493823-75493927	HepG2	liver:	n/a	n/a
4	ATF1	chr15:75509968-75510009	K562	blood:	n/a	n/a
5	ATF2	chr15:75497024-75497515	GM12878	blood:	n/a	n/a
6	ATF2	chr15:75505238-75505864	GM12878	blood:	n/a	n/a
7	ATF2	chr15:75505713-75508426	GM12878	blood:	n/a	n/a
8	ATF2	chr15:75494068-75494542	GM12878	blood:	n/a	n/a
9	ATF2	chr15:75497033-75497506	GM12878	blood:	n/a	n/a
10	ATF2	chr15:75506061-75506608	GM12878	blood:	n/a	n/a
11	ATF2	chr15:75494890-75496514	GM12878	blood:	n/a	n/a
12	ATF2	chr15:75494958-75495400	GM12878	blood:	n/a	n/a
13	ATF2	chr15:75496951-75497422	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr15:75506863-75508495	GM12878	blood:	n/a	n/a
15	ATF2	chr15:75511876-75512201	GM12878	blood:	n/a	n/a
16	ATF3	chr15:75497054-75497526	A549	lung:	n/a	n/a
17	ATF3	chr15:75494229-75494804	K562	blood:	n/a	n/a
18	ATF3	chr15:75494134-75494754	A549	lung:	n/a	n/a
19	BACH1	chr15:75495025-75495198	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr15:75493911-75494645	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr15:75497080-75497504	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr15:75497205-75497384	K562	blood:	n/a	n/a
23	BACH1	chr15:75493771-75494459	K562	blood:	n/a	n/a
24	BATF	chr15:75494978-75495265	GM12878	blood:	n/a	n/a
25	BATF	chr15:75511612-75511931	GM12878	blood:	n/a	n/a
26	BATF	chr15:75511598-75511990	GM12878	blood:	n/a	n/a
27	BATF	chr15:75497125-75497453	GM12878	blood:	n/a	n/a
28	BCL11A	chr15:75511648-75511976	GM12878	blood:	n/a	n/a
29	BCL11A	chr15:75511722-75511991	GM12878	blood:	n/a	n/a
30	BCL3	chr15:75506576-75508365	GM12878	blood:	n/a	chr15:75507383-75507390 chr15:75507561-75507574
31	BCL3	chr15:75505979-75506488	GM12878	blood:	n/a	n/a
32	BCL3	chr15:75505574-75506900	A549	lung:	n/a	n/a
33	BCL3	chr15:75497017-75497566	A549	lung:	n/a	n/a
34	BCL3	chr15:75508620-75508997	GM12878	blood:	n/a	n/a
35	BCL3	chr15:75505663-75508535	A549	lung:	n/a	chr15:75507383-75507390 chr15:75507561-75507574
36	BCL3	chr15:75505511-75508575	GM12878	blood:	n/a	chr15:75507383-75507390 chr15:75507561-75507574
37	BCL3	chr15:75507052-75508658	A549	lung:	n/a	chr15:75507383-75507390 chr15:75507561-75507574
38	BCL3	chr15:75494980-75495468	A549	lung:	n/a	chr15:75495137-75495150
39	BCL3	chr15:75493411-75494857	A549	lung:	n/a	chr15:75494450-75494463 chr15:75494235-75494244 chr15:75494227-75494240 chr15:75494062-75494070 chr15:75494367-75494380 chr15:75494109-75494122 chr15:75494799-75494812 chr15:75494230-75494243 chr15:75494063-75494076 chr15:75494540-75494553 chr15:75494372-75494381
40	BCL3	chr15:75505585-75505953	GM12878	blood:	n/a	n/a
41	BCL3	chr15:75508586-75508928	GM12878	blood:	n/a	n/a
42	BCLAF1	chr15:75493448-75494138	GM12878	blood:	n/a	chr15:75494062-75494070 chr15:75494109-75494122 chr15:75494063-75494076
43	BCLAF1	chr15:75504465-75508533	GM12878	blood:	n/a	chr15:75504683-75504692 chr15:75507383-75507390 chr15:75507561-75507574
44	BCLAF1	chr15:75505652-75508826	GM12878	blood:	n/a	chr15:75507383-75507390 chr15:75507561-75507574
45	BCLAF1	chr15:75494918-75495384	GM12878	blood:	n/a	chr15:75495137-75495150
46	BCLAF1	chr15:75496981-75497547	GM12878	blood:	n/a	n/a
47	BCLAF1	chr15:75494205-75495737	GM12878	blood:	n/a	chr15:75494450-75494463 chr15:75494235-75494244 chr15:75495137-75495150 chr15:75494227-75494240 chr15:75494367-75494380 chr15:75494799-75494812 chr15:75494230-75494243 chr15:75494540-75494553 chr15:75494372-75494381
48	BCLAF1	chr15:75495822-75496664	GM12878	blood:	n/a	n/a
49	BHLHE40	chr15:75496244-75496298	GM12878	blood:	n/a	n/a
50	BHLHE40	chr15:75493784-75495777	K562	blood:	n/a	chr15:75494555-75494571 chr15:75494803-75494819 chr15:75495184-75495200

(count:1405 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:75494877-75494927	Caco-2	colon:	n/a
2	chr15:75494295-75494345	AG04449	skin:	fetal
3	chr15:75494877-75494927	Caco-2	colon:	n/a
4	chr15:75494295-75494345	AG04449	skin:	fetal
5	chr15:75494034-75494084	H1-hESC	embryonic stem cell:	embryo
6	chr15:75500943-75500993	RPTEC	kidney:	n/a
7	chr15:75494022-75494072	SK-N-SH_RA	brain:	n/a
8	chr15:75493996-75494046	HCPEpiC	choroid plexus:	n/a
9	chr15:75500943-75500993	BE2_C	brain:	n/a
10	chr15:75494295-75494345	SK-N-SH	brain:	n/a
11	chr15:75495174-75495224	HRE	kidney:	n/a
12	chr15:75494077-75494127	HL-60	blood:	n/a
13	chr15:75495112-75495162	HIPEpiC	eye:	n/a
14	chr15:75494877-75494927	T-47D	breast:	n/a
15	chr15:75493996-75494046	SAEC	small airway:	n/a
16	chr15:75500859-75500909	GM06990	blood:	n/a
17	chr15:75493996-75494046	HRPEpiC	eye:	n/a
18	chr15:75499862-75499912	MCF-7	breast:	n/a
19	chr15:75494410-75494460	HAEpiC	amniotic membrane:	n/a
20	chr15:75514925-75514975	K562	blood:	n/a
21	chr15:75494410-75494460	NT2-D1	testis:	n/a
22	chr15:75494287-75494337	CMK	blood:	n/a
23	chr15:75494034-75494084	HPAEpiC	pulmonary alveolar:	n/a
24	chr15:75499952-75500002	HCM	heart:	n/a
25	chr15:75495174-75495224	PANC-1	pancreas:	n/a
26	chr15:75497181-75497231	NHDF-neo	bronchial:	n/a
27	chr15:75503805-75503855	HMEC	breast:	n/a
28	chr15:75494295-75494345	Hela-S3	cervix:	n/a
29	chr15:75494410-75494460	Hela-S3	cervix:	n/a
30	chr15:75494410-75494460	IMR90	lung:	fetal
31	chr15:75501277-75501327	A549	lung:	n/a
32	chr15:75493871-75493921	U87	brain:	n/a
33	chr15:75494066-75494116	RPTEC	kidney:	n/a
34	chr15:75493996-75494046	NHBE	bronchial:	n/a
35	chr15:75495112-75495162	MCF-7	breast:	n/a
36	chr15:75493996-75494046	NT2-D1	testis:	n/a
37	chr15:75494295-75494345	AG09309	skin:	n/a
38	chr15:75499952-75500002	MCF10A-Er-Src	breast:	n/a
39	chr15:75493996-75494046	HCT-116	colon:	n/a
40	chr15:75494287-75494337	SAEC	small airway:	n/a
41	chr15:75494877-75494927	BJ	skin:	n/a
42	chr15:75493996-75494046	SK-N-MC	brain:	n/a
43	chr15:75498580-75498630	PrEC	prostate:	n/a
44	chr15:75493871-75493921	K562	blood:	n/a
45	chr15:75494066-75494116	T-47D	breast:	n/a
46	chr15:75494077-75494127	ovcar-3	ovarian:	n/a
47	chr15:75494287-75494337	H1-hESC	embryonic stem cell:	embryo
48	chr15:75494034-75494084	HNPCEpiC	eye:	n/a
49	chr15:75500859-75500909	AG09309	skin:	n/a
50	chr15:75493996-75494046	NB4	blood:	n/a

(count:80 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:75494141..75494785-chr19:10397247..10397835,2	NB4	blood:
2	chr15:75321302..75322293-chr15:75496812..75497792,15	MCF-7	breast:
3	chr15:75345292..75348855-chr15:75495155..75497587,4	K562	blood:
4	chr15:75504624..75507046-chr15:75507156..75508861,2	MCF-7	breast:
5	chr15:75487202..75491376-chr15:75491587..75495203,5	K562	blood:
6	chr15:75493870..75496515-chr15:75627756..75630428,2	K562	blood:
7	chr15:75313377..75315921-chr15:75506187..75507954,2	K562	blood:
8	chr1:228296537..228297467-chr15:75493986..75494523,2	Hela-S3	cervix:
9	chr15:75333855..75341122-chr15:75492635..75495814,9	MCF-7	breast:
10	chr15:75314737..75326433-chr15:75490770..75500610,30	K562	blood:
11	chr15:75358652..75359351-chr15:75496592..75497218,2	K562	blood:
12	chr15:75315929..75318210-chr15:75504654..75506646,2	MCF-7	breast:
13	chr15:75334824..75335770-chr15:75494095..75494948,2	Hela-S3	cervix:
14	chr15:75336184..75338674-chr15:75501578..75503500,2	K562	blood:
15	chr15:75503601..75505139-chr15:75515509..75517281,2	K562	blood:
16	chr15:75505979..75508081-chr15:75512017..75514345,2	K562	blood:
17	chr15:75334490..75335798-chr15:75496834..75497788,5	MCF-7	breast:
18	chr11:746943..747698-chr15:75493994..75494509,2	NB4	blood:
19	chr15:75335299..75336533-chr15:75494000..75494818,4	K562	blood:
20	chr15:75494063..75494759-chr19:11200821..11201384,2	Hela-S3	cervix:
21	chr15:75470196..75472288-chr15:75492167..75494098,2	K562	blood:
22	chr1:45285439..45286092-chr15:75493542..75494533,2	HCT-116	colon:
23	chr15:75505897..75507685-chr15:75540087..75541728,2	MCF-7	breast:
24	chr15:75312886..75327225-chr15:75491522..75500922,36	K562	blood:
25	chr15:75334559..75336503-chr15:75496304..75497892,15	MCF-7	breast:
26	chr15:75488848..75492298-chr15:75492406..75495739,4	MCF-7	breast:
27	chr15:75494917..75495761-chr3:135969152..135969971,2	Hela-S3	cervix:
28	chr15:75490911..75492731-chr15:75500862..75503118,2	K562	blood:
29	chr15:75334055..75342899-chr15:75492444..75498798,20	K562	blood:
30	chr15:75494031..75494716-chr6:146285371..146286217,2	Hela-S3	cervix:
31	chr15:75493511..75494496-chr5:108084246..108084833,2	Hela-S3	cervix:
32	chr15:75494265..75494910-chr20:33103340..33104322,2	Hela-S3	cervix:
33	chr15:75314704..75323577-chr15:75491522..75500562,29	MCF-7	breast:
34	chr15:75334817..75335758-chr15:75495189..75496264,3	MCF-7	breast:
35	chr15:75504624..75507046-chr15:75507156..75508861,2	MCF-7	breast:
36	chr11:93474223..93474807-chr15:75493674..75494425,2	Hela-S3	cervix:
37	chr15:75490684..75493339-chr15:75497415..75499804,2	K562	blood:
38	chr15:75509812..75512195-chr15:75513423..75516416,2	MCF-7	breast:
39	chr15:75493996..75494506-chr17:73775369..73776016,2	Hela-S3	cervix:
40	chr15:75335261..75336225-chr15:75493661..75494947,6	MCF-7	breast:
41	chr15:75307941..75311039-chr15:75492807..75495397,4	MCF-7	breast:
42	chr15:75493782..75494704-chr7:99686361..99687060,2	HCT-116	colon:
43	chr15:75494073..75494672-chr20:60757477..60758442,2	Hela-S3	cervix:
44	chr15:75478122..75480662-chr15:75494393..75496768,2	MCF-7	breast:
45	chr15:74906571..74908107-chr15:75493036..75494786,2	MCF-7	breast:
46	chr15:75494081..75494765-chr6:26216536..26217185,2	Hela-S3	cervix:
47	chr15:75332512..75342228-chr15:75491817..75496419,22	MCF-7	breast:
48	chr10:99205832..99206393-chr15:75493784..75494431,2	Hela-S3	cervix:
49	chr15:75314427..75332274-chr15:75491598..75502885,56	MCF-7	breast:
50	chr15:75321286..75323042-chr15:75496777..75497847,27	K562	blood:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MAN2C1-4	chr15:75504438-75504508	ENSG00000261779.1
2	lnc-MAN2C1-3	chr15:75515661-75516003	NONHSAT047296
3	lnc-C15orf39-1	chr15:75510018-75511743	NONHSAT047295
4	lnc-MAN2C1-2	chr15:75517502-75517542	XLOC_011533
5	lnc-MAN2C1-3	chr15:75515790-75516003	XLOC_011532
6	lnc-MAN2C1-4	chr15:75503642-75503776	ENSG00000261779.1
7	lnc-MAN2C1-3	chr15:75517127-75517272	NONHSAT047296
8	lnc-MAN2C1-3	chr15:75516527-75516799	XLOC_011532
9	lnc-MAN2C1-2	chr15:75519094-75519324	ENSG00000260660.1
10	lnc-MAN2C1-2	chr15:75518100-75519599	XLOC_011533

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	C15orf39	hsa-miR-125b-5p	chr15:75504255-75504276
2	C15orf39	hsa-miR-125b-5p	chr15:75504269-75504276
3	C15orf39	hsa-miR-24-3p	chr15:75503756-75503777

Variant related genes	Relation type
C15orf39	TF binding region
ENSG00000261779	TF binding region
ENSG00000264950	TF binding region
C15orf39	CpG island
ENSG00000261779	CpG island
ENSG00000264950	CpG island
ENSG00000133316	chromatin interactions
ENSG00000254402	chromatin interactions
ENSG00000260919	chromatin interactions
ENSG00000181222	chromatin interactions
ENSG00000260152	chromatin interactions
ENSG00000162910	chromatin interactions
ENSG00000202444	chromatin interactions
ENSG00000138621	chromatin interactions
ENSG00000178718	chromatin interactions
ENSG00000187990	chromatin interactions
ENSG00000179335	chromatin interactions
ENSG00000168274	chromatin interactions
ENSG00000140365	chromatin interactions
ENSG00000125971	chromatin interactions
ENSG00000105371	chromatin interactions
ENSG00000151422	chromatin interactions
ENSG00000260483	chromatin interactions
ENSG00000130164	chromatin interactions
ENSG00000213563	chromatin interactions
ENSG00000177156	chromatin interactions
ENSG00000168090	chromatin interactions
ENSG00000111737	chromatin interactions
ENSG00000240366	chromatin interactions
ENSG00000198794	chromatin interactions
ENSG00000174282	chromatin interactions
ENSG00000260660	chromatin interactions
ENSG00000101181	chromatin interactions
ENSG00000171307	chromatin interactions
ENSG00000167173	chromatin interactions
ENSG00000261779	chromatin interactions
ENSG00000182919	chromatin interactions
ENSG00000114054	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000252722	chromatin interactions
ENSG00000166012	chromatin interactions
ENSG00000146414	chromatin interactions
EEF1A1	miRNA target sites
VPS13B	miRNA target sites

Extended variants
information (count: 1222 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:1222 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3937851	chr15:75493823-75493824	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
2	rs78528377	chr15:75493839-75493840	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
3	rs570705107	chr15:75493882-75493883	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
4	rs369389549	chr15:75493907-75493908	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
5	rs369323319	chr15:75493943-75493944	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
6	rs182838071	chr15:75493953-75493954	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
7	rs568453975	chr15:75494102-75494103	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
8	rs535451036	chr15:75494104-75494105	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
9	rs557299344	chr15:75494158-75494159	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
10	rs569884649	chr15:75494249-75494250	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	32 gene(s)	Overlapped CNVs	n/a
11	rs537341127	chr15:75494257-75494258	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	32 gene(s)	Overlapped CNVs	n/a
12	rs143188727	chr15:75494261-75494262	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	32 gene(s)	Overlapped CNVs	n/a
13	rs372162245	chr15:75494283-75494284	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
14	rs577065182	chr15:75494293-75494294	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
15	rs541137348	chr15:75494578-75494579	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	23 gene(s)	Overlapped CNVs	n/a
16	rs553070870	chr15:75494637-75494638	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
17	rs376764100	chr15:75494652-75494653	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	21 gene(s)	Overlapped CNVs	n/a
18	rs138257917	chr15:75494733-75494734	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
19	rs541491286	chr15:75494746-75494747	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
20	rs563281193	chr15:75494754-75494755	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
21	rs531153093	chr15:75494782-75494783	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
22	rs546088129	chr15:75494786-75494787	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
23	rs143854431	chr15:75494807-75494808	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
24	rs528624486	chr15:75494811-75494812	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
25	rs369502130	chr15:75494858-75494859	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs576111188	chr15:75494888-75494889	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
27	rs146427222	chr15:75494911-75494912	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
28	rs546709210	chr15:75494933-75494934	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
29	rs187625717	chr15:75494945-75494946	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
30	rs569018704	chr15:75494954-75494955	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
31	rs550367767	chr15:75494983-75494984	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
32	rs544784652	chr15:75495070-75495071	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
33	rs562067634	chr15:75495112-75495113	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
34	rs139127411	chr15:75495121-75495122	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
35	rs564695521	chr15:75495127-75495128	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
36	rs372917881	chr15:75495211-75495212	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
37	rs141491433	chr15:75495235-75495236	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
38	rs150877936	chr15:75495241-75495242	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs552459653	chr15:75495271-75495272	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs570675970	chr15:75495279-75495280	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
41	rs375916619	chr15:75495282-75495283	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
42	rs534783130	chr15:75495367-75495368	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
43	rs376042431	chr15:75495397-75495398	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
44	rs553183460	chr15:75495435-75495436	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
45	rs574484180	chr15:75495446-75495447	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
46	rs139360627	chr15:75495454-75495455	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
47	rs77561382	chr15:75495455-75495456	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
48	rs4886677	chr15:75495456-75495457	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs546102386	chr15:75495463-75495464	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
50	rs564408616	chr15:75495467-75495468	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Autism	17322880	CNVD
phobic disorder	16773131	CNVD
Autism	21480499	CNVD
Disorders of sex development	22290220	CNVD
Mental retardation	19951919	CNVD
Mental retardation	16773131	CNVD
T-cell lymphomas	19863542	CNVD
15q24 microdeletion syndrome	22180641	CNVD
15q24 microdeletion syndrome	19921647	CNVD
Disease	22216833	CNVD
Mental retardation	17360722	CNVD
15q24 microdeletion syndrome	22216833	CNVD
15q24 microdeletion syndrome	22283845	CNVD
Developmental delay	17932688	CNVD
craniofacial dysmorphism	17932688	CNVD
digital and genital abnormalities	17932688	CNVD
Epilepsy	22083797	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Myelofibrosis	22110671	CNVD
Bipolar disorder	19114987	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	16616336	CNVD

Chromatin state (count:1219 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75491200-75494000	Flanking Active TSS	GM12878-XiMat	blood
2	chr15:75491200-75494000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
3	chr15:75492200-75494000	Flanking Active TSS	Duodenum Mucosa	Duodenum
4	chr15:75492400-75494000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
5	chr15:75492400-75494000	Flanking Active TSS	Hela-S3	cervix
6	chr15:75492600-75494000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
7	chr15:75492600-75494000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr15:75492600-75494000	Flanking Active TSS	Fetal Intestine Large	intestine
9	chr15:75492600-75494000	Flanking Active TSS	Fetal Intestine Small	intestine
10	chr15:75492600-75494000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
11	chr15:75492600-75494200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
12	chr15:75492600-75494200	Flanking Active TSS	NHEK	skin
13	chr15:75492800-75494000	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr15:75492800-75494000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
15	chr15:75492800-75494000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr15:75492800-75494000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr15:75492800-75494000	Flanking Active TSS	Placenta	Placenta
18	chr15:75492800-75494000	Flanking Active TSS	HMEC	breast
19	chr15:75492800-75495800	Active TSS	ES-I3 Cell Line	embryonic stem cell
20	chr15:75492800-75495800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
21	chr15:75492800-75496800	Active TSS	Pancreatic Islets	Pancreatic Islet
22	chr15:75493000-75494000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
23	chr15:75493000-75494000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
24	chr15:75493000-75494000	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr15:75493000-75494000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr15:75493200-75494000	Flanking Active TSS	H1 Cell Line	embryonic stem cell
27	chr15:75493200-75494000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
28	chr15:75493200-75494000	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
29	chr15:75493200-75494000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
30	chr15:75493200-75494000	Flanking Active TSS	Primary B cells from cord blood	blood
31	chr15:75493200-75494000	Flanking Active TSS	Primary T cells from cord blood	blood
32	chr15:75493200-75494000	Flanking Active TSS	Primary hematopoietic stem cells	blood
33	chr15:75493200-75494000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
34	chr15:75493200-75494000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
35	chr15:75493200-75494000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
36	chr15:75493200-75494000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
37	chr15:75493200-75494000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
38	chr15:75493200-75494000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
39	chr15:75493200-75494000	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
40	chr15:75493200-75494000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
41	chr15:75493200-75494000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr15:75493200-75494000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
43	chr15:75493200-75494000	Flanking Active TSS	Brain Substantia Nigra	brain
44	chr15:75493200-75494000	Flanking Active TSS	Esophagus	oesophagus
45	chr15:75493200-75494000	Flanking Active TSS	Fetal Heart	heart
46	chr15:75493200-75494000	Flanking Active TSS	Fetal Thymus	thymus
47	chr15:75493200-75494000	Flanking Active TSS	Pancreas	Pancrea
48	chr15:75493200-75494000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
49	chr15:75493200-75494000	Flanking Active TSS	Stomach Mucosa	stomach
50	chr15:75493200-75494000	Flanking Active TSS	Thymus	Thymus

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