Variant report
Variant | nsv908678 |
---|---|
Chromosome Location | chr17:60359724-60458987 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:121)
- CpG islands (count:185)
- Chromatin interactive region (count:37)
- LncRNA region (count:11)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | CEBPB | chr17:60398954-60399240 | HepG2 | liver: | n/a | chr17:60399101-60399112 |
2 | CEBPB | chr17:60372643-60372845 | A549 | lung: | n/a | n/a |
3 | CEBPB | chr17:60399051-60399126 | Hela-S3 | cervix: | n/a | chr17:60399101-60399112 |
4 | CEBPB | chr17:60399017-60399170 | IMR90 | lung: | n/a | chr17:60399101-60399112 |
5 | CEBPB | chr17:60383745-60383860 | HepG2 | liver: | n/a | chr17:60383834-60383847 chr17:60383836-60383847 chr17:60383834-60383845 |
6 | CEBPB | chr17:60398987-60399130 | A549 | lung: | n/a | chr17:60399101-60399112 |
7 | CEBPB | chr17:60372707-60372841 | IMR90 | lung: | n/a | n/a |
8 | CEBPB | chr17:60372648-60372857 | HepG2 | liver: | n/a | n/a |
9 | CTCF | chr17:60397180-60397330 | GM12873 | blood: | n/a | n/a |
10 | CTCF | chr17:60398860-60399010 | HCPEpiC | choroid plexus: | n/a | n/a |
11 | CTCF | chr17:60424035-60424052 | GM10248 | blood: | n/a | n/a |
12 | CTCF | chr17:60426418-60426470 | Lung_OC | lung: | n/a | n/a |
13 | CTCF | chr17:60398760-60398910 | HCPEpiC | choroid plexus: | n/a | n/a |
14 | CTCF | chr17:60435377-60435476 | GM13976 | blood: | n/a | n/a |
15 | CTCF | chr17:60360805-60360846 | GM13976 | blood: | n/a | n/a |
16 | CTCF | chr17:60424018-60424030 | GM10248 | blood: | n/a | n/a |
17 | CTCF | chr17:60361730-60361782 | GM13976 | blood: | n/a | n/a |
18 | CTCF | chr17:60434546-60434622 | Lung_OC | lung: | n/a | n/a |
19 | CTCF | chr17:60452160-60452310 | BE2_C | brain: | n/a | n/a |
20 | E2F4 | chr17:60385105-60385265 | MCF10A-Er-Src | breast: | n/a | n/a |
21 | E2F4 | chr17:60381120-60381369 | MCF10A-Er-Src | breast: | n/a | n/a |
22 | E2F4 | chr17:60453011-60453207 | MCF10A-Er-Src | breast: | n/a | n/a |
23 | EP300 | chr17:60447178-60447195 | K562 | blood: | n/a | n/a |
24 | FOS | chr17:60388506-60388698 | MCF10A-Er-Src | breast: | n/a | n/a |
25 | FOS | chr17:60386960-60387033 | MCF10A-Er-Src | breast: | n/a | n/a |
26 | FOXA1 | chr17:60384642-60384974 | HepG2 | liver: | n/a | chr17:60384762-60384777 |
27 | FOXA1 | chr17:60384514-60384926 | HepG2 | liver: | n/a | chr17:60384762-60384777 |
28 | FOXA1 | chr17:60384568-60385030 | HepG2 | liver: | n/a | chr17:60384762-60384777 |
29 | FOXA1 | chr17:60384647-60384882 | HepG2 | liver: | n/a | chr17:60384762-60384777 |
30 | FOXA2 | chr17:60384674-60384859 | HepG2 | liver: | n/a | n/a |
31 | FOXA2 | chr17:60384595-60385077 | A549 | lung: | n/a | n/a |
32 | FOXA2 | chr17:60435021-60435156 | HepG2 | liver: | n/a | n/a |
33 | GATA3 | chr17:60456440-60456571 | SH-SY5Y | brain: | n/a | n/a |
34 | GATA3 | chr17:60456461-60456593 | MCF-7 | breast: | n/a | n/a |
35 | GATA3 | chr17:60384535-60385062 | MCF-7 | breast: | n/a | n/a |
36 | GATA3 | chr17:60414499-60414997 | MCF-7 | breast: | n/a | chr17:60414638-60414655 |
37 | JUN | chr17:60443615-60443841 | HepG2 | liver: | n/a | chr17:60443743-60443756 |
38 | JUND | chr17:60443567-60443922 | HepG2 | liver: | n/a | n/a |
39 | KAP1 | chr17:60384608-60385164 | HEK293 | kidney: | n/a | n/a |
40 | KAP1 | chr17:60384640-60384918 | U2OS | brain: | n/a | n/a |
41 | MAFF | chr17:60398311-60398312 | K562 | blood: | n/a | n/a |
42 | MAFF | chr17:60398159-60398387 | HepG2 | liver: | n/a | chr17:60398313-60398331 chr17:60398312-60398326 |
43 | MAFF | chr17:60363031-60363190 | HepG2 | liver: | n/a | n/a |
44 | MAFK | chr17:60380938-60381157 | HepG2 | liver: | n/a | n/a |
45 | MAFK | chr17:60398188-60398445 | HepG2 | liver: | n/a | chr17:60398314-60398330 chr17:60398309-60398329 chr17:60398311-60398327 |
46 | MAFK | chr17:60380917-60381128 | HepG2 | liver: | n/a | n/a |
47 | MAFK | chr17:60363015-60363203 | HepG2 | liver: | n/a | chr17:60363158-60363174 chr17:60363158-60363169 chr17:60363159-60363170 chr17:60363157-60363171 chr17:60363158-60363169 |
48 | MAFK | chr17:60363148-60363204 | IMR90 | lung: | n/a | chr17:60363158-60363174 chr17:60363158-60363169 chr17:60363159-60363170 chr17:60363157-60363171 chr17:60363158-60363169 |
49 | MYC | chr17:60386887-60387088 | MCF10A-Er-Src | breast: | n/a | n/a |
50 | MYC | chr17:60416617-60416679 | MCF-7 | breast: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr17:60457116-60457166 | AG04449 | skin: | fetal |
2 | chr17:60447682-60447732 | HMEC | breast: | n/a |
3 | chr17:60457116-60457166 | AG04449 | skin: | fetal |
4 | chr17:60447682-60447732 | HMEC | breast: | n/a |
5 | chr17:60447682-60447732 | IMR90 | lung: | fetal |
6 | chr17:60457116-60457166 | ovcar-3 | ovarian: | n/a |
7 | chr17:60456713-60456763 | HMEC | breast: | n/a |
8 | chr17:60447682-60447732 | PFSK-1 | brain: | n/a |
9 | chr17:60457116-60457166 | SK-N-MC | brain: | n/a |
10 | chr17:60447682-60447732 | SKMC | muscle: | n/a |
11 | chr17:60457116-60457166 | Hela-S3 | cervix: | n/a |
12 | chr17:60457116-60457166 | NHBE | bronchial: | n/a |
13 | chr17:60457116-60457166 | HCF | heart: | n/a |
14 | chr17:60456713-60456763 | HCM | heart: | n/a |
15 | chr17:60456713-60456763 | ovcar-3 | ovarian: | n/a |
16 | chr17:60457116-60457166 | HCT-116 | colon: | n/a |
17 | chr17:60447682-60447732 | HRE | kidney: | n/a |
18 | chr17:60447682-60447732 | AG10803 | skin: | n/a |
19 | chr17:60457116-60457166 | MCF10A-Er-Src | breast: | n/a |
20 | chr17:60447682-60447732 | RPTEC | kidney: | n/a |
21 | chr17:60447682-60447732 | HNPCEpiC | eye: | n/a |
22 | chr17:60457116-60457166 | HIPEpiC | eye: | n/a |
23 | chr17:60456713-60456763 | Caco-2 | colon: | n/a |
24 | chr17:60457116-60457166 | HRE | kidney: | n/a |
25 | chr17:60447682-60447732 | ECC-1 | luminal epithelium: | n/a |
26 | chr17:60457116-60457166 | AoSMC | blood vessel: | n/a |
27 | chr17:60457116-60457166 | NHDF-neo | bronchial: | n/a |
28 | chr17:60447682-60447732 | HEK293 | kidney: | embryo |
29 | chr17:60456713-60456763 | HRCEpiC | kidney: | n/a |
30 | chr17:60456713-60456763 | BJ | skin: | n/a |
31 | chr17:60447682-60447732 | GM12891 | blood: | n/a |
32 | chr17:60456713-60456763 | AG09319 | gingival: | n/a |
33 | chr17:60456713-60456763 | NHBE | bronchial: | n/a |
34 | chr17:60457116-60457166 | HUVEC | blood vessel: | n/a |
35 | chr17:60457116-60457166 | GM06990 | blood: | n/a |
36 | chr17:60457116-60457166 | SKMC | muscle: | n/a |
37 | chr17:60447682-60447732 | CMK | blood: | n/a |
38 | chr17:60456713-60456763 | HRPEpiC | eye: | n/a |
39 | chr17:60447682-60447732 | HIPEpiC | eye: | n/a |
40 | chr17:60447682-60447732 | GM12878 | blood: | n/a |
41 | chr17:60447682-60447732 | MCF10A-Er-Src | breast: | n/a |
42 | chr17:60457116-60457166 | HAEpiC | amniotic membrane: | n/a |
43 | chr17:60457116-60457166 | Jurkat | blood: | n/a |
44 | chr17:60456713-60456763 | U87 | brain: | n/a |
45 | chr17:60447682-60447732 | HPAEpiC | pulmonary alveolar: | n/a |
46 | chr17:60456713-60456763 | GM12891 | blood: | n/a |
47 | chr17:60447682-60447732 | Caco-2 | colon: | n/a |
48 | chr17:60456713-60456763 | BE2_C | brain: | n/a |
49 | chr17:60457116-60457166 | HMEC | breast: | n/a |
50 | chr17:60457116-60457166 | HEEpiC | esophagus: | n/a |
(count:37 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr17:60444116..60447469-chr17:60452945..60456072,3 | MCF-7 | breast: | |
2 | chr17:60445717..60447471-chr17:60465899..60467791,2 | MCF-7 | breast: | |
3 | chr17:60444116..60447469-chr17:60452945..60456072,3 | MCF-7 | breast: | |
4 | chr17:60376068..60377977-chr17:60387444..60389081,2 | MCF-7 | breast: | |
5 | chr17:60453070..60454788-chr17:60456450..60459297,2 | MCF-7 | breast: | |
6 | chr17:60454144..60455692-chr17:60464008..60466449,2 | MCF-7 | breast: | |
7 | chr17:60447670..60450051-chr17:60455728..60457295,2 | MCF-7 | breast: | |
8 | chr17:60421652..60423800-chr17:60428152..60430021,2 | MCF-7 | breast: | |
9 | chr17:60421307..60423372-chr17:60428567..60430379,2 | K562 | blood: | |
10 | chr17:60387132..60388706-chr17:60393027..60395897,2 | K562 | blood: | |
11 | chr17:60434774..60436701-chr17:60442498..60445434,2 | K562 | blood: | |
12 | chr17:60408982..60410713-chr17:60412690..60415335,2 | K562 | blood: | |
13 | chr17:60421307..60423372-chr17:60428567..60430379,2 | K562 | blood: | |
14 | chr10:102756121..102758163-chr17:60389261..60390875,2 | MCF-7 | breast: | |
15 | chr17:60429751..60432202-chr17:60447188..60450154,2 | MCF-7 | breast: | |
16 | chr17:60414589..60417517-chr17:60420559..60422547,2 | K562 | blood: | |
17 | chr17:60441571..60445666-chr17:60460958..60463527,3 | MCF-7 | breast: | |
18 | chr17:60447670..60450051-chr17:60455728..60457295,2 | MCF-7 | breast: | |
19 | chr17:60397114..60399438-chr17:60405884..60408179,2 | MCF-7 | breast: | |
20 | chr17:60434774..60436701-chr17:60442498..60445434,2 | K562 | blood: | |
21 | chr17:60407146..60410709-chr17:60413424..60416392,3 | MCF-7 | breast: | |
22 | chr17:60387132..60388706-chr17:60393027..60395897,2 | K562 | blood: | |
23 | chr17:60421652..60423800-chr17:60428152..60430021,2 | MCF-7 | breast: | |
24 | chr17:60432068..60434312-chr17:60444916..60447644,2 | MCF-7 | breast: | |
25 | chr17:60451543..60453556-chr17:60462736..60465005,2 | MCF-7 | breast: | |
26 | chr17:60378073..60380516-chr17:60388051..60389639,2 | MCF-7 | breast: | |
27 | chr17:60452810..60454899-chr17:60457850..60459471,2 | MCF-7 | breast: | |
28 | chr17:60414589..60417517-chr17:60420559..60422547,2 | K562 | blood: | |
29 | chr17:60453037..60456889-chr17:60468241..60470888,3 | MCF-7 | breast: | |
30 | chr17:60408982..60410713-chr17:60412690..60415335,2 | K562 | blood: | |
31 | chr12:110841086..110841864-chr17:60410785..60411410,2 | HCT-116 | colon: | |
32 | chr17:60387371..60389325-chr17:60391804..60394700,2 | MCF-7 | breast: | |
33 | chr17:60387371..60389325-chr17:60391804..60394700,2 | MCF-7 | breast: | |
34 | chr17:60407146..60410709-chr17:60413424..60416392,3 | MCF-7 | breast: | |
35 | chr17:60378073..60380516-chr17:60388051..60389639,2 | MCF-7 | breast: | |
36 | chr17:60445165..60447055-chr17:60455052..60457949,2 | K562 | blood: | |
37 | chr17:60376068..60377977-chr17:60387444..60389081,2 | MCF-7 | breast: |
(count:11 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AC053481.1-4 | chr17:60399114-60399242 | NONHSAT055150 |
2 | lnc-AC053481.1-4 | chr17:60399334-60400097 | NONHSAT055151 |
3 | lnc-AC053481.1-4 | chr17:60393130-60394961 | NONHSAT055150 |
4 | lnc-AC053481.1-4 | chr17:60399114-60399242 | NONHSAT055151 |
5 | lnc-AC053481.1-4 | chr17:60394618-60394961 | NONHSAT055151 |
6 | lnc-EFCAB3-2 | chr17:60397245-60397550 | NONHSAT055152 |
7 | lnc-AC053481.1-4 | chr17:60401135-60402156 | NONHSAT055151 |
8 | lnc-AC053481.1-4 | chr17:60399822-60400097 | NONHSAT055150 |
9 | lnc-AC053481.1-2 | chr17:60384813-60385182 | ncRnaDb_ncrna_FR286847_1 |
10 | lnc-AC053481.1-4 | chr17:60401135-60402148 | NONHSAT055150 |
11 | lnc-AC053481.1-4 | chr17:60399334-60399507 | NONHSAT055150 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000263887 | TF binding region |
EFCAB3 | TF binding region |
ENSG00000239809 | TF binding region |
RNU7-52P | TF binding region |
ENSG00000270033 | TF binding region |
ENSG00000242123 | TF binding region |
ENSG00000263887 | CpG island |
EFCAB3 | CpG island |
ENSG00000239809 | CpG island |
RNU7-52P | CpG island |
ENSG00000270033 | CpG island |
ENSG00000242123 | CpG island |
ENSG00000172421 | chromatin interactions |
ENSG00000239809 | chromatin interactions |
ENSG00000107816 | chromatin interactions |
ENSG00000196510 | chromatin interactions |
ENSG00000242123 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs562560404 | chr17:60360276-60360277 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs144345074 | chr17:60360346-60360347 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs3968037 | chr17:60360410-60360411 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs537886093 | chr17:60360662-60360663 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs574616103 | chr17:60360805-60360806 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs150913339 | chr17:60361602-60361603 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs567938954 | chr17:60361621-60361622 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs576363911 | chr17:60361770-60361771 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs569918264 | chr17:60363103-60363104 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs535696275 | chr17:60363112-60363113 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs536978197 | chr17:60363113-60363114 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs550122587 | chr17:60363144-60363145 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs555917510 | chr17:60363145-60363146 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs566275941 | chr17:60363174-60363175 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs560473655 | chr17:60375449-60375450 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs528090505 | chr17:60377856-60377857 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs374116063 | chr17:60378075-60378076 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs566038284 | chr17:60378090-60378091 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs75870878 | chr17:60378094-60378095 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs186406719 | chr17:60378099-60378100 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs529256080 | chr17:60384843-60384844 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
22 | rs541633986 | chr17:60384866-60384867 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
23 | rs564490350 | chr17:60384867-60384868 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
24 | rs533690733 | chr17:60384875-60384876 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
25 | rs550251394 | chr17:60384907-60384908 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
26 | rs570352038 | chr17:60384910-60384911 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
27 | rs529338240 | chr17:60384953-60384954 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
28 | rs73329403 | chr17:60384968-60384969 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
29 | rs113375800 | chr17:60384997-60384998 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
30 | rs200872451 | chr17:60384998-60384999 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
31 | rs10642716 | chr17:60385006-60385007 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
32 | rs10642717 | chr17:60385007-60385008 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
33 | rs10682823 | chr17:60385029-60385030 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
34 | rs375855811 | chr17:60385031-60385032 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
35 | rs566199490 | chr17:60385072-60385073 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
36 | rs185874147 | chr17:60385075-60385076 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
37 | rs550738189 | chr17:60385090-60385091 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
38 | rs28716486 | chr17:60385092-60385093 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
39 | rs374753855 | chr17:60385123-60385124 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
40 | rs570506420 | chr17:60385133-60385134 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
41 | rs539617128 | chr17:60385141-60385142 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
42 | rs556079051 | chr17:60385159-60385160 | Enhancers | lncRNA | n/a | Overlapped CNVs | n/a |
43 | rs575916852 | chr17:60385203-60385204 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs116767748 | chr17:60385262-60385263 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs73992015 | chr17:60385293-60385294 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs139826833 | chr17:60385312-60385313 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs8080209 | chr17:60385358-60385359 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
48 | rs564708715 | chr17:60385362-60385363 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs578137464 | chr17:60385396-60385397 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs75800343 | chr17:60385419-60385420 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Ewing''s sarcoma | 21437220 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Melanoma | 18172304 | CNVD |
Moyamoya disease | 22323933 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Cancer | 20164919 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Chordoma | 21602918 | CNVD |
Neurofibromatosis | 20686819 | CNVD |
Peripheral nerve sheath tumors | 20686819 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Cancer | 21499728 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Medulloblastoma | 21292688 | CNVD |
Neuroblastoma | 18923524 | CNVD |
Neuroblastoma | 17897457 | CNVD |
Neuroblastoma | 17327916 | CNVD |
Breast cancer | 21264507 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Breast cancer | 22028636 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Acute myeloid leukemia | 20724749 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Gastric cancer | 17167181 | CNVD |
Breast cancer | 19287154 | CNVD |
Leukemia | 20874852 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Bladder cancer | 21909424 | CNVD |
Biliary cancer | 20360734 | CNVD |
Breast cancer | 20360734 | CNVD |
Coronary artery disease | 20360734 | CNVD |
Crohn''s disease | 20360734 | CNVD |
Hypertension | 20360734 | CNVD |
Rheumatoid arthritis | 20360734 | CNVD |
Type 1 diabetes | 20360734 | CNVD |
Type 2 diabetes | 20360734 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Ewing''s sarcoma | 18628472 | CNVD |
Glioblastoma multiforme | 18628472 | CNVD |
Leukemia | 18628472 | CNVD |
Ewing''s sarcoma | 22429812 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21364760 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Breast cancer | 21509527 | CNVD |
Chordoma | 18071362 | CNVD |
Cancer | 16751803 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Breast cancer | 21523713 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Breast cancer | 21785460 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Breast cancer | 16397240 | CNVD |
Breast cancer | 17603634 | CNVD |
Urothelial carcinoma | 18382360 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Malignant melanoma | 17260012 | CNVD |
Breast cancer | 16608533 | CNVD |
Breast cancer | 21858162 | CNVD |
Neurocytoma | 17123091 | CNVD |
Central neurocytomas | 17123091 | CNVD |
XY sex reversal | 17503084 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Breast cancer | 17899364 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Breast cancer | 16620391 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21611746 | CNVD |
Williams-Beuren syndrome | 16971481 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 21958427 | CNVD |
T-cell acute lymphoblastic leukemia | 19406988 | CNVD |
Congenital Hypertrichosis Syndrome | 21636067 | CNVD |
Cancer | 21129771 | CNVD |
Non-syndromic sensorineural hearing loss | 17431168 | CNVD |
Breast cancer | 22522925 | CNVD |
Schizophrenia | 23813976 | CNVD |
Melanoma | 20877625 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr17:60384800-60385600 | Enhancers | Fetal Intestine Small | intestine |
2 | chr17:60385000-60385200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
3 | chr17:60385000-60385400 | Enhancers | Fetal Intestine Large | intestine |
4 | chr17:60385000-60385400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
5 | chr17:60386600-60387200 | Enhancers | NHEK | skin |
6 | chr17:60387200-60387600 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
7 | chr17:60396000-60396400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
8 | chr17:60396400-60397200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
9 | chr17:60397200-60397400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
10 | chr17:60397200-60398000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
11 | chr17:60397400-60398000 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
12 | chr17:60397400-60398200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
13 | chr17:60397400-60399200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
14 | chr17:60398000-60398400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
15 | chr17:60398400-60399000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
16 | chr17:60398600-60398800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
17 | chr17:60399200-60399400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
18 | chr17:60400200-60400400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
19 | chr17:60400600-60400800 | Bivalent Enhancer | Primary T cells fromperipheralblood | blood |
20 | chr17:60411600-60412200 | Enhancers | Fetal Intestine Small | intestine |
21 | chr17:60421400-60421600 | Bivalent Enhancer | HSMMtube | muscle |
22 | chr17:60421400-60422000 | Enhancers | Fetal Intestine Small | intestine |
23 | chr17:60421600-60422000 | Enhancers | Fetal Intestine Large | intestine |
24 | chr17:60429800-60430000 | Bivalent Enhancer | A549 | lung |