Variant report

Variant	nsv909353
Chromosome Location	chr18:7479133-7578782
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:967)
CpG islands
(count:978)
Chromatin interactive
region (count:22)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:967 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr18:7567223-7567257	K562	blood:	n/a	n/a
2	ARID3A	chr18:7575137-7575406	HepG2	liver:	n/a	n/a
3	ARID3A	chr18:7567159-7567359	HepG2	liver:	n/a	n/a
4	ATF2	chr18:7577742-7578206	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr18:7577712-7578133	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF3	chr18:7567156-7567368	K562	blood:	n/a	chr18:7567347-7567356 chr18:7567273-7567283
7	BACH1	chr18:7575526-7576005	H1-hESC	embryonic stem cell:	n/a	chr18:7575877-7575891
8	BACH1	chr18:7542025-7542029	K562	blood:	n/a	n/a
9	BACH1	chr18:7566904-7567617	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr18:7566548-7566660	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr18:7568581-7568843	H1-hESC	embryonic stem cell:	n/a	n/a
12	BCL11A	chr18:7577811-7577975	H1-hESC	embryonic stem cell:	n/a	n/a
13	BHLHE40	chr18:7567045-7567395	GM12878	blood:	n/a	chr18:7567340-7567356 chr18:7567117-7567133
14	BHLHE40	chr18:7566784-7567400	HepG2	liver:	n/a	chr18:7567340-7567356 chr18:7567117-7567133
15	BHLHE40	chr18:7520471-7520649	GM12878	blood:	n/a	chr18:7520557-7520566 chr18:7520557-7520566
16	BHLHE40	chr18:7566522-7567366	K562	blood:	n/a	chr18:7567340-7567356 chr18:7566691-7566707 chr18:7567117-7567133
17	BHLHE40	chr18:7575112-7575466	HepG2	liver:	n/a	n/a
18	BHLHE40	chr18:7520517-7520690	HepG2	liver:	n/a	chr18:7520557-7520566 chr18:7520557-7520566
19	BHLHE40	chr18:7520520-7520629	K562	blood:	n/a	chr18:7520557-7520566 chr18:7520557-7520566
20	BRCA1	chr18:7566113-7566632	Hela-S3	cervix:	n/a	n/a
21	CCNT2	chr18:7566537-7567551	K562	blood:	n/a	n/a
22	CEBPB	chr18:7487811-7488113	IMR90	lung:	n/a	chr18:7487948-7487959 chr18:7487948-7487961 chr18:7487950-7487961
23	CEBPB	chr18:7545802-7546128	IMR90	lung:	n/a	n/a
24	CEBPB	chr18:7548380-7548578	HepG2	liver:	n/a	n/a
25	CEBPB	chr18:7574543-7574739	A549	lung:	n/a	chr18:7574590-7574603
26	CEBPB	chr18:7487797-7488098	HepG2	liver:	n/a	chr18:7487948-7487959 chr18:7487948-7487961 chr18:7487950-7487961
27	CEBPB	chr18:7525858-7525917	HepG2	liver:	n/a	chr18:7525887-7525898
28	CEBPB	chr18:7570005-7570017	A549	lung:	n/a	n/a
29	CEBPB	chr18:7487882-7488100	K562	blood:	n/a	chr18:7487948-7487959 chr18:7487948-7487961 chr18:7487950-7487961
30	CEBPB	chr18:7577766-7578084	Hela-S3	cervix:	n/a	n/a
31	CEBPB	chr18:7492855-7493001	HepG2	liver:	n/a	chr18:7492946-7492957
32	CEBPB	chr18:7577743-7578071	H1-hESC	embryonic stem cell:	n/a	n/a
33	CEBPB	chr18:7545933-7546250	A549	lung:	n/a	n/a
34	CEBPB	chr18:7576856-7577034	H1-hESC	embryonic stem cell:	n/a	n/a
35	CHD1	chr18:7567168-7567252	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD1	chr18:7566627-7566933	H1-hESC	embryonic stem cell:	n/a	n/a
37	CHD1	chr18:7568086-7568380	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD1	chr18:7565958-7569508	IMR90	lung:	n/a	chr18:7567084-7567094
39	CHD2	chr18:7568188-7568727	Hela-S3	cervix:	n/a	n/a
40	CHD2	chr18:7566721-7566935	K562	blood:	n/a	n/a
41	CHD2	chr18:7566856-7567052	HepG2	liver:	n/a	n/a
42	CHD2	chr18:7567294-7567335	HepG2	liver:	n/a	n/a
43	CHD2	chr18:7566988-7567580	Hela-S3	cervix:	n/a	chr18:7567084-7567094
44	CHD2	chr18:7577748-7578084	H1-hESC	embryonic stem cell:	n/a	n/a
45	CREB1	chr18:7567063-7567481	H1-hESC	embryonic stem cell:	n/a	n/a
46	CREB1	chr18:7566663-7567589	A549	lung:	n/a	n/a
47	CREB1	chr18:7566858-7567601	HepG2	liver:	n/a	n/a
48	CREB1	chr18:7566645-7567541	H1-hESC	embryonic stem cell:	n/a	n/a
49	CREB1	chr18:7577760-7578200	H1-hESC	embryonic stem cell:	n/a	n/a
50	CREB1	chr18:7567001-7567445	K562	blood:	n/a	n/a

(count:978 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr18:7567638-7567688	AG04450	lung:	fetal
2	chr18:7566258-7566308	NHBE	bronchial:	n/a
3	chr18:7567638-7567688	AG04450	lung:	fetal
4	chr18:7566258-7566308	NHBE	bronchial:	n/a
5	chr18:7567717-7567767	HRE	kidney:	n/a
6	chr18:7567548-7567598	RPTEC	kidney:	n/a
7	chr18:7568186-7568236	HEK293	kidney:	embryo
8	chr18:7566258-7566308	IMR90	lung:	fetal
9	chr18:7567426-7567476	BJ	skin:	n/a
10	chr18:7566656-7566706	HCT-116	colon:	n/a
11	chr18:7566258-7566308	AoSMC	blood vessel:	n/a
12	chr18:7568539-7568589	GM12878	blood:	n/a
13	chr18:7566558-7566608	MCF10A-Er-Src	breast:	n/a
14	chr18:7568265-7568315	HCF	heart:	n/a
15	chr18:7567426-7567476	HL-60	blood:	n/a
16	chr18:7563847-7563897	HCPEpiC	choroid plexus:	n/a
17	chr18:7568829-7568879	GM12878	blood:	n/a
18	chr18:7568891-7568941	HEEpiC	esophagus:	n/a
19	chr18:7567548-7567598	HRCEpiC	kidney:	n/a
20	chr18:7563847-7563897	AG04450	lung:	fetal
21	chr18:7566558-7566608	HNPCEpiC	eye:	n/a
22	chr18:7567548-7567598	GM12878	blood:	n/a
23	chr18:7567799-7567849	HL-60	blood:	n/a
24	chr18:7567638-7567688	HEEpiC	esophagus:	n/a
25	chr18:7568891-7568941	HRE	kidney:	n/a
26	chr18:7567799-7567849	GM06990	blood:	n/a
27	chr18:7566781-7566831	HNPCEpiC	eye:	n/a
28	chr18:7567426-7567476	CMK	blood:	n/a
29	chr18:7567548-7567598	PrEC	prostate:	n/a
30	chr18:7566781-7566831	ovcar-3	ovarian:	n/a
31	chr18:7567548-7567598	AG09319	gingival:	n/a
32	chr18:7567426-7567476	T-47D	breast:	n/a
33	chr18:7567548-7567598	NHDF-neo	bronchial:	n/a
34	chr18:7567717-7567767	AG04450	lung:	fetal
35	chr18:7568265-7568315	SK-N-MC	brain:	n/a
36	chr18:7567426-7567476	AG10803	skin:	n/a
37	chr18:7568539-7568589	NHBE	bronchial:	n/a
38	chr18:7568265-7568315	LNCaP	prostate:	n/a
39	chr18:7567426-7567476	SAEC	small airway:	n/a
40	chr18:7566781-7566831	HPAEpiC	pulmonary alveolar:	n/a
41	chr18:7568829-7568879	HEK293	kidney:	embryo
42	chr18:7567426-7567476	GM12892	blood:	n/a
43	chr18:7566258-7566308	HCPEpiC	choroid plexus:	n/a
44	chr18:7568829-7568879	AoSMC	blood vessel:	n/a
45	chr18:7563847-7563897	ECC-1	luminal epithelium:	n/a
46	chr18:7566781-7566831	Hepatocyte	liver:	n/a
47	chr18:7567638-7567688	HUVEC	blood vessel:	n/a
48	chr18:7568891-7568941	HUVEC	blood vessel:	n/a
49	chr18:7566258-7566308	HUVEC	blood vessel:	n/a
50	chr18:7566558-7566608	HCF	heart:	n/a

(count:22 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr18:7555198..7557360-chr18:7558467..7560228,2	K562	blood:
2	chr18:7514458..7516129-chr18:7523489..7525604,2	K562	blood:
3	chr18:7485561..7489531-chr18:7490547..7493519,3	K562	blood:
4	chr18:7509867..7511990-chr18:7516061..7517678,2	MCF-7	breast:
5	chr18:7485561..7488328-chr18:7489989..7493519,3	K562	blood:
6	chr18:7514458..7516129-chr18:7523489..7525604,2	K562	blood:
7	chr18:7560671..7563899-chr18:7566458..7568145,4	K562	blood:
8	chr18:7567923..7568423-chr20:61846958..61847561,2	MCF-7	breast:
9	chr18:7485561..7488328-chr18:7489989..7493519,3	K562	blood:
10	chr18:7556771..7559463-chr18:7563687..7565562,2	K562	blood:
11	chr18:7560178..7562976-chr18:7564673..7567118,2	MCF-7	breast:
12	chr18:7555198..7557360-chr18:7558467..7560228,2	K562	blood:
13	chr18:7489323..7491482-chr18:7507564..7509092,2	K562	blood:
14	chr18:7561940..7563899-chr18:7566456..7568145,3	K562	blood:
15	chr18:7509867..7511990-chr18:7516061..7517678,2	MCF-7	breast:
16	chr18:7556771..7559463-chr18:7563687..7565562,2	K562	blood:
17	chr18:7465161..7467875-chr18:7484981..7486851,2	K562	blood:
18	chr18:7485561..7489531-chr18:7490547..7493519,3	K562	blood:
19	chr18:7221690..7222309-chr18:7566824..7567430,2	K562	blood:
20	chr18:7504934..7505434-chr3:98276004..98276980,2	HCT-116	colon:
21	chr18:7566319..7569036-chr18:7569097..7573393,5	K562	blood:
22	chr18:7489323..7491482-chr18:7507564..7509092,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LAMA1-4	chr18:7508432-7508885	XLOC_012749
2	lnc-LAMA1-4	chr18:7508970-7509053	XLOC_012749
3	lnc-LAMA1-4	chr18:7509140-7509419	XLOC_012749

No data

Variant related genes	Relation type
PTPRM	TF binding region
PTPRM	CpG island
ENSG00000149658	chromatin interactions
ENSG00000173482	chromatin interactions

Extended variants
information (count: 2907 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:2907 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs16951859	chr18:7479133-7479134	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs185402286	chr18:7479143-7479144	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs112889118	chr18:7479148-7479149	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs35670375	chr18:7479152-7479153	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs577634010	chr18:7479165-7479166	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs546548135	chr18:7479186-7479187	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs117235270	chr18:7479203-7479204	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs531976300	chr18:7479222-7479223	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs548392418	chr18:7479226-7479227	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs562216893	chr18:7479253-7479254	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs142029744	chr18:7479258-7479259	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs547407554	chr18:7479266-7479267	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs60896586	chr18:7479290-7479291	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs368774485	chr18:7479327-7479328	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs547336016	chr18:7479360-7479361	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs539329822	chr18:7479375-7479376	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs4410160	chr18:7479422-7479423	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs189968803	chr18:7479504-7479505	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs182541450	chr18:7479513-7479514	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs535641264	chr18:7479611-7479612	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs536277802	chr18:7479656-7479657	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs555127464	chr18:7479661-7479662	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs572188283	chr18:7479665-7479666	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs534573047	chr18:7479666-7479667	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs557765262	chr18:7479672-7479673	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs577747990	chr18:7479701-7479702	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs546173255	chr18:7479737-7479738	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs563244165	chr18:7479747-7479748	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs554995478	chr18:7479777-7479778	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs12605884	chr18:7479793-7479794	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs561815578	chr18:7479805-7479806	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs116867250	chr18:7479811-7479812	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs547516894	chr18:7479816-7479817	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs185795188	chr18:7479819-7479820	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs35454973	chr18:7479873-7479874	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs191191784	chr18:7479890-7479891	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs12605914	chr18:7479918-7479919	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs569942145	chr18:7479957-7479958	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs535261830	chr18:7480000-7480001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs549184266	chr18:7480015-7480016	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs183858858	chr18:7480028-7480029	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs534692077	chr18:7480040-7480041	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs557928550	chr18:7480081-7480082	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs571262384	chr18:7480086-7480087	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs72892123	chr18:7480126-7480127	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs556541266	chr18:7480137-7480138	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs558642592	chr18:7480142-7480143	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs150688953	chr18:7480143-7480144	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs73381765	chr18:7480162-7480163	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs555522790	chr18:7480188-7480189	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Acute myeloid leukemia	16864856	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Kartagener syndrome	16639409	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Cancer	21183584	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Human rectal carcinomas	16397240	CNVD
Colorectal cancer	16272173	CNVD
Colorectal cancer	19150955	CNVD
Follicular lymphoma	20505157	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	18923191	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Trisomy 18 syndrome	17576883	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21785460	CNVD
Autism	20808228	CNVD
lymphocytic leukemia	21291569	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Multiple myeloma	17550852	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
abnormal development	18461090	CNVD
Breast cancer	17133270	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	21922591	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute myeloid leukemia	17377590	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	20838587	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1395 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:7467400-7480200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr18:7471000-7483000	Weak transcription	Colon Smooth Muscle	Colon
3	chr18:7473200-7479200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr18:7476000-7482400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr18:7477800-7479400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr18:7478200-7479200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr18:7479000-7480400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr18:7479200-7479400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr18:7479400-7479600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr18:7479400-7480600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr18:7479600-7479800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr18:7479600-7480000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr18:7479600-7480600	Enhancers	Adipose Nuclei	Adipose
14	chr18:7479800-7480200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr18:7480200-7480400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr18:7480200-7480600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr18:7480200-7480600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr18:7480200-7481400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr18:7480400-7482000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr18:7480600-7482400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr18:7480600-7483000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr18:7481000-7481400	Enhancers	Skeletal Muscle Female	skeletal muscle
23	chr18:7481000-7485200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr18:7481400-7483000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr18:7482000-7483200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr18:7482400-7483000	Enhancers	Brain Hippocampus Middle	brain
27	chr18:7482400-7483200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr18:7482400-7483800	Enhancers	Brain Substantia Nigra	brain
29	chr18:7482400-7485800	Enhancers	Rectal Smooth Muscle	rectum
30	chr18:7482800-7483200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr18:7483000-7485200	Enhancers	Colon Smooth Muscle	Colon
32	chr18:7483000-7485800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr18:7483600-7484000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr18:7484000-7484800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr18:7484400-7484600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr18:7484600-7485000	Enhancers	Stomach Smooth Muscle	stomach
37	chr18:7484600-7487000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr18:7484800-7485200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr18:7484800-7485200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr18:7485000-7485200	Flanking Active TSS	Stomach Smooth Muscle	stomach
41	chr18:7485200-7485600	Active TSS	Stomach Smooth Muscle	stomach
42	chr18:7485200-7487800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr18:7485200-7488400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr18:7485400-7485800	Active TSS	Right Ventricle	heart
45	chr18:7485600-7486200	Flanking Active TSS	Stomach Smooth Muscle	stomach
46	chr18:7485800-7488400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr18:7487000-7487200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr18:7487800-7488800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr18:7488000-7488600	Enhancers	Fetal Lung	lung
50	chr18:7488400-7488800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links