Variant report

Variant	nsv909355
Chromosome Location	chr18:7484216-7578782
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:947)
CpG islands
(count:979)
Chromatin interactive
region (count:22)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:947 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr18:7567223-7567257	K562	blood:	n/a	n/a
2	ARID3A	chr18:7567159-7567359	HepG2	liver:	n/a	n/a
3	ARID3A	chr18:7575137-7575406	HepG2	liver:	n/a	n/a
4	ATF2	chr18:7577742-7578206	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr18:7577712-7578133	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF3	chr18:7567156-7567368	K562	blood:	n/a	chr18:7567347-7567356 chr18:7567273-7567283
7	BACH1	chr18:7568581-7568843	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr18:7566904-7567617	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr18:7542025-7542029	K562	blood:	n/a	n/a
10	BACH1	chr18:7575526-7576005	H1-hESC	embryonic stem cell:	n/a	chr18:7575877-7575891
11	BACH1	chr18:7566548-7566660	H1-hESC	embryonic stem cell:	n/a	n/a
12	BCL11A	chr18:7577811-7577975	H1-hESC	embryonic stem cell:	n/a	n/a
13	BHLHE40	chr18:7567045-7567395	GM12878	blood:	n/a	chr18:7567340-7567356 chr18:7567117-7567133
14	BHLHE40	chr18:7566784-7567400	HepG2	liver:	n/a	chr18:7567340-7567356 chr18:7567117-7567133
15	BHLHE40	chr18:7520520-7520629	K562	blood:	n/a	chr18:7520557-7520566 chr18:7520557-7520566
16	BHLHE40	chr18:7575112-7575466	HepG2	liver:	n/a	n/a
17	BHLHE40	chr18:7566522-7567366	K562	blood:	n/a	chr18:7567340-7567356 chr18:7566691-7566707 chr18:7567117-7567133
18	BHLHE40	chr18:7520517-7520690	HepG2	liver:	n/a	chr18:7520557-7520566 chr18:7520557-7520566
19	BHLHE40	chr18:7520471-7520649	GM12878	blood:	n/a	chr18:7520557-7520566 chr18:7520557-7520566
20	BRCA1	chr18:7566113-7566632	Hela-S3	cervix:	n/a	n/a
21	CCNT2	chr18:7566537-7567551	K562	blood:	n/a	n/a
22	CEBPB	chr18:7487811-7488113	IMR90	lung:	n/a	chr18:7487948-7487959 chr18:7487948-7487961 chr18:7487950-7487961
23	CEBPB	chr18:7525858-7525917	HepG2	liver:	n/a	chr18:7525887-7525898
24	CEBPB	chr18:7545933-7546250	A549	lung:	n/a	n/a
25	CEBPB	chr18:7548380-7548578	HepG2	liver:	n/a	n/a
26	CEBPB	chr18:7570005-7570017	A549	lung:	n/a	n/a
27	CEBPB	chr18:7574543-7574739	A549	lung:	n/a	chr18:7574590-7574603
28	CEBPB	chr18:7577743-7578071	H1-hESC	embryonic stem cell:	n/a	n/a
29	CEBPB	chr18:7492855-7493001	HepG2	liver:	n/a	chr18:7492946-7492957
30	CEBPB	chr18:7487882-7488100	K562	blood:	n/a	chr18:7487948-7487959 chr18:7487948-7487961 chr18:7487950-7487961
31	CEBPB	chr18:7577766-7578084	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr18:7487797-7488098	HepG2	liver:	n/a	chr18:7487948-7487959 chr18:7487948-7487961 chr18:7487950-7487961
33	CEBPB	chr18:7545802-7546128	IMR90	lung:	n/a	n/a
34	CEBPB	chr18:7576856-7577034	H1-hESC	embryonic stem cell:	n/a	n/a
35	CHD1	chr18:7565958-7569508	IMR90	lung:	n/a	chr18:7567084-7567094
36	CHD1	chr18:7567168-7567252	H1-hESC	embryonic stem cell:	n/a	n/a
37	CHD1	chr18:7566627-7566933	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD1	chr18:7568086-7568380	H1-hESC	embryonic stem cell:	n/a	n/a
39	CHD2	chr18:7566856-7567052	HepG2	liver:	n/a	n/a
40	CHD2	chr18:7566988-7567580	Hela-S3	cervix:	n/a	chr18:7567084-7567094
41	CHD2	chr18:7566721-7566935	K562	blood:	n/a	n/a
42	CHD2	chr18:7567294-7567335	HepG2	liver:	n/a	n/a
43	CHD2	chr18:7577748-7578084	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD2	chr18:7568188-7568727	Hela-S3	cervix:	n/a	n/a
45	CREB1	chr18:7566663-7567589	A549	lung:	n/a	n/a
46	CREB1	chr18:7566544-7566952	H1-hESC	embryonic stem cell:	n/a	n/a
47	CREB1	chr18:7566645-7567541	H1-hESC	embryonic stem cell:	n/a	n/a
48	CREB1	chr18:7567001-7567445	K562	blood:	n/a	n/a
49	CREB1	chr18:7567887-7568154	A549	lung:	n/a	n/a
50	CREB1	chr18:7568530-7568853	A549	lung:	n/a	n/a

(count:979 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr18:7567799-7567849	AG04449	skin:	fetal
2	chr18:7563847-7563897	NB4	blood:	n/a
3	chr18:7567717-7567767	GM12891	blood:	n/a
4	chr18:7567799-7567849	AG04449	skin:	fetal
5	chr18:7563847-7563897	NB4	blood:	n/a
6	chr18:7567717-7567767	GM12891	blood:	n/a
7	chr18:7567548-7567598	HPAEpiC	pulmonary alveolar:	n/a
8	chr18:7567426-7567476	AoSMC	blood vessel:	n/a
9	chr18:7566558-7566608	BJ	skin:	n/a
10	chr18:7568539-7568589	PANC-1	pancreas:	n/a
11	chr18:7566781-7566831	HL-60	blood:	n/a
12	chr18:7568891-7568941	GM12878	blood:	n/a
13	chr18:7567799-7567849	GM12892	blood:	n/a
14	chr18:7566781-7566831	Jurkat	blood:	n/a
15	chr18:7567548-7567598	GM19239	blood:	n/a
16	chr18:7567548-7567598	AG09319	gingival:	n/a
17	chr18:7563847-7563897	HRE	kidney:	n/a
18	chr18:7567638-7567688	HEK293	kidney:	embryo
19	chr18:7568159-7568209	HEEpiC	esophagus:	n/a
20	chr18:7566656-7566706	ProgFib	skin:	n/a
21	chr18:7567426-7567476	LNCaP	prostate:	n/a
22	chr18:7568186-7568236	SK-N-SH	brain:	n/a
23	chr18:7566558-7566608	PANC-1	pancreas:	n/a
24	chr18:7568829-7568879	GM12891	blood:	n/a
25	chr18:7566781-7566831	RPTEC	kidney:	n/a
26	chr18:7568265-7568315	Hela-S3	cervix:	n/a
27	chr18:7568539-7568589	GM12892	blood:	n/a
28	chr18:7567548-7567598	HRPEpiC	eye:	n/a
29	chr18:7568829-7568879	PFSK-1	brain:	n/a
30	chr18:7566781-7566831	NB4	blood:	n/a
31	chr18:7566258-7566308	A549	lung:	n/a
32	chr18:7567799-7567849	AG09309	skin:	n/a
33	chr18:7568891-7568941	AG04449	skin:	fetal
34	chr18:7568186-7568236	HCT-116	colon:	n/a
35	chr18:7566656-7566706	Hepatocyte	liver:	n/a
36	chr18:7563847-7563897	GM19239	blood:	n/a
37	chr18:7568891-7568941	GM12891	blood:	n/a
38	chr18:7566656-7566706	Jurkat	blood:	n/a
39	chr18:7567799-7567849	HIPEpiC	eye:	n/a
40	chr18:7568265-7568315	HEEpiC	esophagus:	n/a
41	chr18:7568539-7568589	HCT-116	colon:	n/a
42	chr18:7568539-7568589	HEK293	kidney:	embryo
43	chr18:7566781-7566831	NHBE	bronchial:	n/a
44	chr18:7568186-7568236	HL-60	blood:	n/a
45	chr18:7568159-7568209	HCM	heart:	n/a
46	chr18:7567799-7567849	MCF-7	breast:	n/a
47	chr18:7566656-7566706	HL-60	blood:	n/a
48	chr18:7568891-7568941	Hela-S3	cervix:	n/a
49	chr18:7568265-7568315	HL-60	blood:	n/a
50	chr18:7566656-7566706	GM12892	blood:	n/a

(count:22 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr18:7489323..7491482-chr18:7507564..7509092,2	K562	blood:
2	chr18:7514458..7516129-chr18:7523489..7525604,2	K562	blood:
3	chr18:7560178..7562976-chr18:7564673..7567118,2	MCF-7	breast:
4	chr18:7555198..7557360-chr18:7558467..7560228,2	K562	blood:
5	chr18:7485561..7488328-chr18:7489989..7493519,3	K562	blood:
6	chr18:7514458..7516129-chr18:7523489..7525604,2	K562	blood:
7	chr18:7489323..7491482-chr18:7507564..7509092,2	K562	blood:
8	chr18:7221690..7222309-chr18:7566824..7567430,2	K562	blood:
9	chr18:7567923..7568423-chr20:61846958..61847561,2	MCF-7	breast:
10	chr18:7509867..7511990-chr18:7516061..7517678,2	MCF-7	breast:
11	chr18:7556771..7559463-chr18:7563687..7565562,2	K562	blood:
12	chr18:7485561..7488328-chr18:7489989..7493519,3	K562	blood:
13	chr18:7561940..7563899-chr18:7566456..7568145,3	K562	blood:
14	chr18:7485561..7489531-chr18:7490547..7493519,3	K562	blood:
15	chr18:7465161..7467875-chr18:7484981..7486851,2	K562	blood:
16	chr18:7560671..7563899-chr18:7566458..7568145,4	K562	blood:
17	chr18:7566319..7569036-chr18:7569097..7573393,5	K562	blood:
18	chr18:7555198..7557360-chr18:7558467..7560228,2	K562	blood:
19	chr18:7504934..7505434-chr3:98276004..98276980,2	HCT-116	colon:
20	chr18:7485561..7489531-chr18:7490547..7493519,3	K562	blood:
21	chr18:7556771..7559463-chr18:7563687..7565562,2	K562	blood:
22	chr18:7509867..7511990-chr18:7516061..7517678,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LAMA1-4	chr18:7508970-7509053	XLOC_012749
2	lnc-LAMA1-4	chr18:7508432-7508885	XLOC_012749
3	lnc-LAMA1-4	chr18:7509140-7509419	XLOC_012749

No data

Variant related genes	Relation type
PTPRM	TF binding region
PTPRM	CpG island
ENSG00000173482	chromatin interactions
ENSG00000149658	chromatin interactions

Extended variants
information (count: 2699 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:2699 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12605481	chr18:7484216-7484217	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs569928199	chr18:7484240-7484241	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs7359760	chr18:7484245-7484246	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs561907378	chr18:7484256-7484257	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs541823033	chr18:7484304-7484305	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs16951889	chr18:7484334-7484335	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs575163935	chr18:7484338-7484339	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs201275868	chr18:7484352-7484353	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs532184009	chr18:7484357-7484358	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs35221807	chr18:7484378-7484379	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs149923194	chr18:7484387-7484388	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs560658160	chr18:7484436-7484437	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs532788838	chr18:7484439-7484440	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs73381780	chr18:7484442-7484443	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs563009783	chr18:7484467-7484468	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs531573500	chr18:7484471-7484472	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs12608357	chr18:7484474-7484475	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs557149236	chr18:7484485-7484486	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs7359762	chr18:7484496-7484497	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs533822923	chr18:7484509-7484510	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs547330249	chr18:7484557-7484558	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs570504286	chr18:7484589-7484590	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs539627155	chr18:7484595-7484596	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs373587646	chr18:7484605-7484606	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs145102404	chr18:7484606-7484607	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs745189	chr18:7484696-7484697	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs16951892	chr18:7484711-7484712	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs555386009	chr18:7484763-7484764	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs572111068	chr18:7484789-7484790	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs34150299	chr18:7484800-7484801	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs187378872	chr18:7484803-7484804	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs116313384	chr18:7484838-7484839	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs144516960	chr18:7484849-7484850	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs530129744	chr18:7484900-7484901	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs562816182	chr18:7484921-7484922	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs190789100	chr18:7484927-7484928	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs745187	chr18:7484933-7484934	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs147888396	chr18:7484942-7484943	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs556626709	chr18:7484957-7484958	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs115739468	chr18:7485002-7485003	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs547368	chr18:7485003-7485004	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs141528829	chr18:7485052-7485053	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs559003591	chr18:7485069-7485070	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs532953128	chr18:7485075-7485076	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs549924595	chr18:7485079-7485080	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs147069822	chr18:7485095-7485096	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs535535511	chr18:7485108-7485109	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs558548409	chr18:7485110-7485111	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs565632731	chr18:7485138-7485139	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs534610895	chr18:7485140-7485141	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Acute myeloid leukemia	16864856	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Kartagener syndrome	16639409	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Cancer	21183584	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Human rectal carcinomas	16397240	CNVD
Colorectal cancer	16272173	CNVD
Colorectal cancer	19150955	CNVD
Follicular lymphoma	20505157	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	18923191	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Trisomy 18 syndrome	17576883	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21785460	CNVD
Autism	20808228	CNVD
lymphocytic leukemia	21291569	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Multiple myeloma	17550852	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
abnormal development	18461090	CNVD
Breast cancer	17133270	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	21922591	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute myeloid leukemia	17377590	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	20838587	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1366 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:7481000-7485200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr18:7482400-7485800	Enhancers	Rectal Smooth Muscle	rectum
3	chr18:7483000-7485200	Enhancers	Colon Smooth Muscle	Colon
4	chr18:7483000-7485800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr18:7484000-7484800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr18:7484400-7484600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr18:7484600-7485000	Enhancers	Stomach Smooth Muscle	stomach
8	chr18:7484600-7487000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr18:7484800-7485200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr18:7484800-7485200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr18:7485000-7485200	Flanking Active TSS	Stomach Smooth Muscle	stomach
12	chr18:7485200-7485600	Active TSS	Stomach Smooth Muscle	stomach
13	chr18:7485200-7487800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr18:7485200-7488400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr18:7485400-7485800	Active TSS	Right Ventricle	heart
16	chr18:7485600-7486200	Flanking Active TSS	Stomach Smooth Muscle	stomach
17	chr18:7485800-7488400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr18:7487000-7487200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr18:7487800-7488800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr18:7488000-7488600	Enhancers	Fetal Lung	lung
21	chr18:7488400-7488800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr18:7488400-7489000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr18:7490400-7490800	Enhancers	Primary hematopoietic stem cells	blood
24	chr18:7496000-7497200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr18:7497400-7497600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr18:7500400-7501000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr18:7500600-7500800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr18:7501000-7502000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr18:7502000-7502600	Enhancers	Placenta	Placenta
30	chr18:7502000-7502800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr18:7502200-7502400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr18:7502200-7502600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr18:7502200-7502600	Enhancers	Fetal Heart	heart
34	chr18:7502200-7502800	Enhancers	Skeletal Muscle Female	skeletal muscle
35	chr18:7502200-7502800	Enhancers	HepG2	liver
36	chr18:7502400-7509400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr18:7502600-7503000	Weak transcription	Fetal Heart	heart
38	chr18:7502800-7504400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr18:7503000-7503600	Enhancers	Fetal Heart	heart
40	chr18:7504400-7504800	ZNF genes & repeats	Left Ventricle	heart
41	chr18:7504400-7505000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr18:7504400-7505200	ZNF genes & repeats	Aorta	Aorta
43	chr18:7505200-7514200	Weak transcription	Aorta	Aorta
44	chr18:7508600-7509400	Enhancers	iPS-20b Cell Line	embryonic stem cell
45	chr18:7508800-7510400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr18:7509000-7509200	Enhancers	H1 Cell Line	embryonic stem cell
47	chr18:7509000-7509400	Enhancers	H9 Cell Line	embryonic stem cell
48	chr18:7509000-7509400	Enhancers	iPS-18 Cell Line	embryonic stem cell
49	chr18:7509400-7512000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
50	chr18:7509400-7514800	Weak transcription	H9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links