Variant report

Variant	nsv909386
Chromosome Location	chr18:11938102-12095950
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4643)
CpG islands
(count:2808)
Chromatin interactive
region (count:149)
LncRNA
region (count:11)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4643 , 50 per page) page: 1 2 3 4 5 6 7 ... 93

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr18:11946503-11947879	K562	blood:	n/a	n/a
2	ARID3A	chr18:11937886-11938254	HepG2	liver:	n/a	n/a
3	ARID3A	chr18:11953120-11953369	K562	blood:	n/a	n/a
4	ARID3A	chr18:11955577-11955916	K562	blood:	n/a	n/a
5	ARID3A	chr18:11954974-11955062	K562	blood:	n/a	n/a
6	ARID3A	chr18:12038970-12039222	HepG2	liver:	n/a	n/a
7	ARID3A	chr18:11951483-11951785	K562	blood:	n/a	n/a
8	ARID3A	chr18:11981872-11982212	HepG2	liver:	n/a	n/a
9	ARID3A	chr18:11970464-11970725	K562	blood:	n/a	n/a
10	ARID3A	chr18:11981509-11981627	HepG2	liver:	n/a	n/a
11	ARID3A	chr18:11937850-11938277	K562	blood:	n/a	n/a
12	ARID3A	chr18:11955409-11955965	HepG2	liver:	n/a	n/a
13	ARID3A	chr18:11994407-11994903	HepG2	liver:	n/a	n/a
14	ARID3A	chr18:12008355-12008698	HepG2	liver:	n/a	n/a
15	ARID3A	chr18:11980098-11981249	HepG2	liver:	n/a	n/a
16	ARID3A	chr18:11948964-11949185	HepG2	liver:	n/a	n/a
17	ARID3A	chr18:11981074-11981228	K562	blood:	n/a	n/a
18	ARID3A	chr18:11982059-11982245	K562	blood:	n/a	n/a
19	ARID3A	chr18:11987770-11987834	K562	blood:	n/a	n/a
20	ARID3A	chr18:11962438-11963239	K562	blood:	n/a	n/a
21	ATF1	chr18:11953081-11953528	K562	blood:	n/a	n/a
22	ATF2	chr18:11947108-11947652	GM12878	blood:	n/a	n/a
23	ATF2	chr18:11980997-11981334	H1-hESC	embryonic stem cell:	n/a	n/a
24	ATF2	chr18:12050101-12050661	GM12878	blood:	n/a	n/a
25	ATF2	chr18:12049934-12050725	GM12878	blood:	n/a	n/a
26	ATF3	chr18:11953195-11953438	K562	blood:	n/a	chr18:11953305-11953316
27	ATF3	chr18:11955638-11955962	K562	blood:	n/a	n/a
28	ATF3	chr18:11955691-11955826	HepG2	liver:	n/a	n/a
29	ATF3	chr18:11942765-11942979	K562	blood:	n/a	n/a
30	ATF3	chr18:11947132-11947544	A549	lung:	n/a	n/a
31	BACH1	chr18:11946810-11947854	K562	blood:	n/a	n/a
32	BACH1	chr18:11937946-11938159	K562	blood:	n/a	n/a
33	BACH1	chr18:11987749-11987935	K562	blood:	n/a	n/a
34	BACH1	chr18:11956846-11957129	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr18:11955589-11956009	H1-hESC	embryonic stem cell:	n/a	n/a
36	BACH1	chr18:11947183-11947845	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr18:11955675-11955923	K562	blood:	n/a	n/a
38	BACH1	chr18:12038354-12039412	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr18:11980511-11981154	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr18:11951676-11951948	K562	blood:	n/a	n/a
41	BACH1	chr18:11994815-11995014	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr18:11948485-11949070	H1-hESC	embryonic stem cell:	n/a	n/a
43	BACH1	chr18:11987689-11987898	H1-hESC	embryonic stem cell:	n/a	n/a
44	BACH1	chr18:11981477-11981827	H1-hESC	embryonic stem cell:	n/a	n/a
45	BATF	chr18:12050086-12050579	GM12878	blood:	n/a	chr18:12050210-12050218
46	BATF	chr18:12053382-12053605	GM12878	blood:	n/a	n/a
47	BATF	chr18:11947213-11947566	GM12878	blood:	n/a	n/a
48	BATF	chr18:11947330-11947566	GM12878	blood:	n/a	n/a
49	BATF	chr18:12005731-12006073	GM12878	blood:	n/a	chr18:12005927-12005937 chr18:12005953-12005963 chr18:12005926-12005937
50	BCL11A	chr18:12050008-12050716	GM12878	blood:	n/a	chr18:12050475-12050484 chr18:12050034-12050043

(count:2808 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr18:11948154-11948204	GM12878	blood:	n/a
2	chr18:12039173-12039223	AG10803	skin:	n/a
3	chr18:11948154-11948204	GM12878	blood:	n/a
4	chr18:12039173-12039223	AG10803	skin:	n/a
5	chr18:11947936-11947986	AoSMC	blood vessel:	n/a
6	chr18:12064388-12064438	AG09319	gingival:	n/a
7	chr18:12068065-12068115	HRCEpiC	kidney:	n/a
8	chr18:11981591-11981641	ProgFib	skin:	n/a
9	chr18:11981602-11981652	HUVEC	blood vessel:	n/a
10	chr18:11945273-11945323	SK-N-SH_RA	brain:	n/a
11	chr18:11978319-11978369	NB4	blood:	n/a
12	chr18:11981602-11981652	U87	brain:	n/a
13	chr18:12076476-12076526	LNCaP	prostate:	n/a
14	chr18:12072395-12072445	A549	lung:	n/a
15	chr18:11980981-11981031	Caco-2	colon:	n/a
16	chr18:11947936-11947986	HRE	kidney:	n/a
17	chr18:12076365-12076415	HAEpiC	amniotic membrane:	n/a
18	chr18:12076435-12076485	HEK293	kidney:	embryo
19	chr18:11947571-11947621	NB4	blood:	n/a
20	chr18:11981602-11981652	HAEpiC	amniotic membrane:	n/a
21	chr18:11947936-11947986	HRPEpiC	eye:	n/a
22	chr18:11948579-11948629	Jurkat	blood:	n/a
23	chr18:12038580-12038630	NT2-D1	testis:	n/a
24	chr18:11947875-11947925	BJ	skin:	n/a
25	chr18:12041672-12041722	HRE	kidney:	n/a
26	chr18:12030535-12030585	AG09309	skin:	n/a
27	chr18:12038718-12038768	HEEpiC	esophagus:	n/a
28	chr18:11978319-11978369	AoSMC	blood vessel:	n/a
29	chr18:11947875-11947925	HPAEpiC	pulmonary alveolar:	n/a
30	chr18:11978319-11978369	HEK293	kidney:	embryo
31	chr18:12068099-12068149	HRPEpiC	eye:	n/a
32	chr18:12039289-12039339	PANC-1	pancreas:	n/a
33	chr18:11981389-11981439	GM19239	blood:	n/a
34	chr18:12067067-12067117	PANC-1	pancreas:	n/a
35	chr18:12076365-12076415	AG04449	skin:	fetal
36	chr18:12076476-12076526	SKMC	muscle:	n/a
37	chr18:12076365-12076415	HCM	heart:	n/a
38	chr18:11945273-11945323	PrEC	prostate:	n/a
39	chr18:11982241-11982291	AG09309	skin:	n/a
40	chr18:11978319-11978369	Caco-2	colon:	n/a
41	chr18:11982063-11982113	HL-60	blood:	n/a
42	chr18:12067067-12067117	IMR90	lung:	fetal
43	chr18:12038128-12038178	ovcar-3	ovarian:	n/a
44	chr18:11948579-11948629	ovcar-3	ovarian:	n/a
45	chr18:12064388-12064438	PFSK-1	brain:	n/a
46	chr18:11982063-11982113	HEEpiC	esophagus:	n/a
47	chr18:12092942-12092992	GM12878	blood:	n/a
48	chr18:12041356-12041406	K562	blood:	n/a
49	chr18:11945273-11945323	SK-N-MC	brain:	n/a
50	chr18:11980953-11981003	HCF	heart:	n/a

(count:149 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr18:12025555..12027976-chr18:12028619..12030454,2	K562	blood:
2	chr12:6579509..6580224-chr18:11980779..11981594,2	Hela-S3	cervix:
3	chr18:12063010..12065990-chr19:13351067..13352603,2	MCF-7	breast:
4	chr18:11947580..11949116-chr18:11949691..11952333,2	K562	blood:
5	chr18:11943655..11945361-chr18:11945655..11947239,2	K562	blood:
6	chr18:12006542..12008097-chr18:12010125..12012103,2	MCF-7	breast:
7	chr18:11732574..11733777-chr18:12038625..12039612,8	K562	blood:
8	chr18:11980686..11981570-chr3:149530416..149530989,2	Hela-S3	cervix:
9	chr18:11997422..12000710-chr18:12005717..12008163,3	K562	blood:
10	chr18:12009084..12011598-chr18:12022271..12024382,2	MCF-7	breast:
11	chr18:11937666..11938178-chr18:11980436..11980995,2	MCF-7	breast:
12	chr18:11907841..11909998-chr18:12042409..12044684,2	MCF-7	breast:
13	chr18:11945202..11946852-chr18:11982600..11984410,2	K562	blood:
14	chr18:11906925..11910950-chr18:11978930..11983753,7	MCF-7	breast:
15	chr1:28832088..28833058-chr18:11980322..11980977,2	Hela-S3	cervix:
16	chr18:12015892..12018624-chr18:12025559..12027409,2	K562	blood:
17	chr18:11906869..11908788-chr18:11979428..11982249,2	K562	blood:
18	chr18:11950713..11953292-chr18:11962814..11965398,2	K562	blood:
19	chr1:24285780..24286361-chr18:11980215..11981116,2	Hela-S3	cervix:
20	chr18:12017282..12018907-chr18:12020565..12022522,2	K562	blood:
21	chr18:11979171..11983679-chr18:11993501..11995734,4	MCF-7	breast:
22	chr18:11951098..11953868-chr18:11983215..11985135,2	K562	blood:
23	chr18:11942200..11944403-chr18:11945957..11947615,2	K562	blood:
24	chr18:11937478..11938603-chr18:11995051..11996237,21	K562	blood:
25	chr18:12084453..12086286-chr18:12088021..12090033,2	K562	blood:
26	chr18:11654951..11655937-chr18:12038618..12039570,4	MCF-7	breast:
27	chr18:11952790..11957780-chr18:11977949..11982684,7	K562	blood:
28	chr18:12092455..12093131-chr18:12240900..12241463,2	MCF-7	breast:
29	chr1:104068529..104069287-chr18:11980099..11980792,2	Hela-S3	cervix:
30	chr18:11907115..11909589-chr18:11947697..11950690,2	MCF-7	breast:
31	chr18:11927997..11930119-chr18:11947025..11949213,2	K562	blood:
32	chr18:11978630..11983643-chr18:11987662..11991726,6	MCF-7	breast:
33	chr18:11961001..11963298-chr18:11980089..11982172,2	K562	blood:
34	chr18:11980409..11982733-chr18:12000463..12003199,2	MCF-7	breast:
35	chr18:11961487..11963465-chr18:11979793..11981920,2	K562	blood:
36	chr18:11938000..11939656-chr18:11946087..11948724,2	K562	blood:
37	chr18:11980301..11981116-chr8:80942163..80942686,2	Hela-S3	cervix:
38	chr18:11955876..11958355-chr18:11979083..11981244,2	MCF-7	breast:
39	chr18:11947304..11948125-chr18:11981391..11982015,2	Hela-S3	cervix:
40	chr18:12038572..12040680-chr18:12043555..12046070,2	MCF-7	breast:
41	chr18:11978886..11981038-chr18:11986460..11988368,2	MCF-7	breast:
42	chr18:11913714..11914470-chr18:11995363..11996159,2	MCF-7	breast:
43	chr18:12094117..12094711-chr18:12236525..12237062,2	K562	blood:
44	chr18:11994002..11996965-chr18:12008009..12011015,3	MCF-7	breast:
45	chr18:11967810..11971954-chr18:11978967..11982085,5	K562	blood:
46	chr18:11949109..11951046-chr18:11952725..11954944,2	K562	blood:
47	chr18:12005936..12008667-chr18:12037616..12040479,2	MCF-7	breast:
48	chr18:12006542..12008097-chr18:12010125..12012103,2	MCF-7	breast:
49	chr18:11905031..11907114-chr18:12010048..12012085,2	K562	blood:
50	chr18:11980570..11987752-chr18:11988318..11993643,9	K562	blood:

(count:11 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AP002414.1.1-1	chr18:12031121-12031164	XLOC_012773
2	lnc-ANKRD62-2	chr18:12081796-12081838	ENSG00000267722.1
3	lnc-ANKRD62-1	chr18:12074792-12075074	XLOC_012628
4	lnc-AP002414.1.1-1	chr18:12031915-12032132	XLOC_012773
5	lnc-ANKRD62-2	chr18:12081539-12081657	ENSG00000267722.1
6	lnc-AP002414.1.1-1	chr18:12031695-12032180	ENSG00000267480.1
7	lnc-AP002414.1.1-4	chr18:11993987-11994371	ENSG00000266955.1
8	lnc-ANKRD62-2	chr18:12085171-12085266	ENSG00000267722.1
9	lnc-AP002414.1.1-1	chr18:12031177-12031217	ENSG00000267480.1
10	lnc-ANKRD62-1	chr18:12073319-12073537	XLOC_012628
11	lnc-AP002414.1.1-4	chr18:11994795-11994937	ENSG00000266955.1

No data

Variant related genes	Relation type
ENSG00000267292	TF binding region
ENSG00000267722	TF binding region
ANKRD62	TF binding region
ENSG00000266995	TF binding region
ENSG00000256616	TF binding region
ENSG00000267533	TF binding region
RNU6-324P	TF binding region
ENSG00000266955	TF binding region
ENSG00000267478	TF binding region
ENSG00000212712	TF binding region
ENSG00000267480	TF binding region
IMPA2	TF binding region
ENSG00000267292	CpG island
ENSG00000267722	CpG island
ANKRD62	CpG island
ENSG00000266995	CpG island
ENSG00000256616	CpG island
ENSG00000267533	CpG island
RNU6-324P	CpG island
ENSG00000266955	CpG island
ENSG00000267478	CpG island
ENSG00000212712	CpG island
ENSG00000267480	CpG island
IMPA2	CpG island
ENSG00000180198	chromatin interactions
ENSG00000185946	chromatin interactions
ENSG00000255112	chromatin interactions
ENSG00000266955	chromatin interactions
ENSG00000152990	chromatin interactions
ENSG00000147586	chromatin interactions
ENSG00000254505	chromatin interactions
ENSG00000189266	chromatin interactions
ENSG00000011304	chromatin interactions
ENSG00000129691	chromatin interactions
ENSG00000273141	chromatin interactions
ENSG00000242125	chromatin interactions
ENSG00000267165	chromatin interactions
ENSG00000254692	chromatin interactions
ENSG00000141401	chromatin interactions
ENSG00000141385	chromatin interactions
ENSG00000117036	chromatin interactions
ENSG00000082996	chromatin interactions
ENSG00000130511	chromatin interactions
ENSG00000200827	chromatin interactions
ENSG00000267663	chromatin interactions
ENSG00000154889	chromatin interactions
ENSG00000266995	chromatin interactions
ENSG00000267079	chromatin interactions
ENSG00000212712	chromatin interactions
ENSG00000267661	chromatin interactions
ENSG00000139190	chromatin interactions

Extended variants
information (count: 6930 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:6930 , 50 per page) page: 1 2 3 4 5 6 7 ... 139

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs56335557	chr18:11938102-11938103	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs559370792	chr18:11938106-11938107	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs529764139	chr18:11938156-11938157	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs375664314	chr18:11938199-11938200	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs548900514	chr18:11938248-11938249	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs369359769	chr18:11938259-11938260	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs561105612	chr18:11938308-11938309	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs528298985	chr18:11938355-11938356	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs541750304	chr18:11938369-11938370	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs538015378	chr18:11938409-11938410	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs187022953	chr18:11938436-11938437	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs373285579	chr18:11938459-11938460	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs552370875	chr18:11938477-11938478	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs571372170	chr18:11938478-11938479	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs546889064	chr18:11938479-11938480	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs145643446	chr18:11938533-11938534	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs191838766	chr18:11938556-11938557	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs147726541	chr18:11938605-11938606	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs536689267	chr18:11938629-11938630	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs4309468	chr18:11938681-11938682	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs183564636	chr18:11938689-11938690	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs545325460	chr18:11938709-11938710	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs537217184	chr18:11938728-11938729	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs532537769	chr18:11938782-11938783	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs4239303	chr18:11938804-11938805	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs574718598	chr18:11938853-11938854	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs202197063	chr18:11938897-11938898	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs371259458	chr18:11938901-11938902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs540202002	chr18:11938920-11938921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs551663992	chr18:11938956-11938957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs536986450	chr18:11938959-11938960	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs193191795	chr18:11939007-11939008	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs373070328	chr18:11939008-11939009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs569251049	chr18:11939010-11939011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs149183979	chr18:11939015-11939016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs534706717	chr18:11939018-11939019	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs185508612	chr18:11939028-11939029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs189496290	chr18:11939048-11939049	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs377732115	chr18:11939049-11939050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs191092441	chr18:11939077-11939078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs575509771	chr18:11939091-11939092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs545812739	chr18:11939092-11939093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs554773654	chr18:11939099-11939100	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs183642571	chr18:11939103-11939104	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs188407876	chr18:11939108-11939109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs7236956	chr18:11939158-11939159	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
47	rs2848458	chr18:11939166-11939167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs181263476	chr18:11939181-11939182	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs184995045	chr18:11939188-11939189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs548582537	chr18:11939192-11939193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Acute myeloid leukemia	16864856	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Kartagener syndrome	16639409	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Cancer	21183584	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Human rectal carcinomas	16397240	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16272173	CNVD
Colorectal cancer	19150955	CNVD
Follicular lymphoma	20505157	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	18923191	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Trisomy 18 syndrome	17576883	CNVD
Autism	20808228	CNVD
lymphocytic leukemia	21291569	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ewing''s sarcoma	17952124	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	21922591	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute myeloid leukemia	17377590	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16620391	CNVD
Myelofibrosis	22110671	CNVD
Retinoblastoma	21504564	CNVD
Glioma	17123091	CNVD
Neurodevelopmental disorder	22521361	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Autism	20531469	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:4540 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:11927400-11946000	Weak transcription	Ovary	ovary
2	chr18:11927800-11946000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr18:11935000-11938200	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr18:11937800-11938200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr18:11937800-11938200	Enhancers	Liver	Liver
6	chr18:11937800-11938400	Enhancers	Hela-S3	cervix
7	chr18:11937800-11938600	Enhancers	A549	lung
8	chr18:11938000-11942000	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr18:11938000-11945600	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr18:11938200-11938600	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr18:11938200-11938600	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr18:11938200-11938600	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr18:11938200-11938800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
14	chr18:11938400-11942400	Weak transcription	Hela-S3	cervix
15	chr18:11938600-11943000	Weak transcription	A549	lung
16	chr18:11938600-11946200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr18:11938600-11946400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr18:11938800-11942400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr18:11939000-11947200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr18:11941600-11947400	Enhancers	Placenta	Placenta
21	chr18:11942000-11942800	Enhancers	Primary monocytes fromperipheralblood	blood
22	chr18:11942200-11946200	Weak transcription	Fetal Muscle Trunk	muscle
23	chr18:11942400-11942600	Weak transcription	Rectal Mucosa Donor 31	rectum
24	chr18:11942400-11942800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
25	chr18:11942400-11943800	Enhancers	Hela-S3	cervix
26	chr18:11942600-11942800	Enhancers	Rectal Mucosa Donor 31	rectum
27	chr18:11942800-11945800	Weak transcription	Primary monocytes fromperipheralblood	blood
28	chr18:11942800-11946400	Weak transcription	Rectal Mucosa Donor 31	rectum
29	chr18:11942800-11947000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
30	chr18:11943000-11943800	Enhancers	Gastric	stomach
31	chr18:11943000-11943800	Enhancers	Sigmoid Colon	Sigmoid Colon
32	chr18:11943000-11943800	Enhancers	A549	lung
33	chr18:11943400-11947000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr18:11943600-11943800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr18:11943600-11943800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
36	chr18:11943600-11943800	Enhancers	Pancreas	Pancrea
37	chr18:11943600-11943800	Enhancers	Psoas Muscle	Psoas
38	chr18:11943600-11943800	Enhancers	HepG2	liver
39	chr18:11943600-11944000	Enhancers	HSMMtube	muscle
40	chr18:11943600-11944400	Enhancers	K562	blood
41	chr18:11943600-11945000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr18:11943800-11944000	Flanking Active TSS	Hela-S3	cervix
43	chr18:11943800-11944400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr18:11943800-11944600	Enhancers	Skeletal Muscle Female	skeletal muscle
45	chr18:11943800-11945400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr18:11943800-11945400	Weak transcription	HepG2	liver
47	chr18:11943800-11946000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr18:11943800-11946000	Weak transcription	Pancreas	Pancrea
49	chr18:11943800-11946000	Weak transcription	A549	lung
50	chr18:11943800-11946200	Weak transcription	Sigmoid Colon	Sigmoid Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links