| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
rs566487081 |
chr12:122234543-122234544 |
Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 2 |
rs533889455 |
chr12:122234548-122234549 |
Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 3 |
rs1060104 |
chr12:122234574-122234575 |
Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
| 4 |
rs570327571 |
chr12:122234589-122234590 |
Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 5 |
rs559103936 |
chr12:122234601-122234602 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 6 |
rs556064408 |
chr12:122234602-122234603 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 7 |
rs574387337 |
chr12:122234666-122234667 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 8 |
rs143547611 |
chr12:122234673-122234674 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 9 |
rs534317147 |
chr12:122234674-122234675 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 10 |
rs1168664 |
chr12:122234676-122234677 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
| 11 |
rs546303754 |
chr12:122234690-122234691 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 12 |
rs564539637 |
chr12:122234719-122234720 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 13 |
rs528160149 |
chr12:122234800-122234801 |
Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 14 |
rs1168665 |
chr12:122234813-122234814 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
| 15 |
rs376721716 |
chr12:122234826-122234827 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 16 |
rs529582637 |
chr12:122234840-122234841 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 17 |
rs140330212 |
chr12:122234859-122234860 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 18 |
rs192351819 |
chr12:122234861-122234862 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 19 |
rs563430105 |
chr12:122234874-122234875 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 20 |
rs184897071 |
chr12:122234881-122234882 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 21 |
rs376048997 |
chr12:122234884-122234885 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 22 |
rs570188136 |
chr12:122234895-122234896 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 23 |
rs537692632 |
chr12:122234904-122234905 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 24 |
rs549554695 |
chr12:122234907-122234908 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 25 |
rs573984014 |
chr12:122234916-122234917 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 26 |
rs567872102 |
chr12:122234922-122234923 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 27 |
rs540873320 |
chr12:122234936-122234937 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 28 |
rs570675380 |
chr12:122234937-122234938 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 29 |
rs535746154 |
chr12:122234980-122234981 |
Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 30 |
rs553756806 |
chr12:122235013-122235014 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 31 |
rs370812502 |
chr12:122235014-122235015 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 32 |
rs142048748 |
chr12:122235048-122235049 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 33 |
rs539437557 |
chr12:122235063-122235064 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 34 |
rs558313214 |
chr12:122235079-122235080 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 35 |
rs576608309 |
chr12:122235089-122235090 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 36 |
rs544071090 |
chr12:122235093-122235094 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 37 |
rs370774175 |
chr12:122235102-122235103 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
| 38 |
rs74597892 |
chr12:122235107-122235108 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 39 |
rs541724919 |
chr12:122235108-122235109 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 40 |
rs559779928 |
chr12:122235125-122235126 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 41 |
rs527307030 |
chr12:122235139-122235140 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 42 |
rs150704575 |
chr12:122235148-122235149 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 43 |
rs559674468 |
chr12:122235153-122235154 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 44 |
rs563876838 |
chr12:122235158-122235159 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 45 |
rs373708885 |
chr12:122235167-122235168 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 46 |
rs531314056 |
chr12:122235198-122235199 |
Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 47 |
rs549420192 |
chr12:122235207-122235208 |
Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
| 48 |
rs372293885 |
chr12:122235228-122235229 |
Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
| 49 |
rs34778323 |
chr12:122235241-122235242 |
Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
| 50 |
rs11613651 |
chr12:122235282-122235283 |
Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
