Variant report

Variant	nsv911314
Chromosome Location	chr19:19866371-20021046
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2261)
CpG islands
(count:2688)
Chromatin interactive
region (count:45)
LncRNA
region (count:69)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2261 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:19887056-19887679	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:19972798-19973004	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:19889278-19889340	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:19976567-19977170	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:19976951-19977119	K562	blood:	n/a	n/a
6	ARID3A	chr19:19887214-19887466	K562	blood:	n/a	n/a
7	ATF1	chr19:19887060-19887661	K562	blood:	n/a	n/a
8	ATF1	chr19:19935971-19936147	K562	blood:	n/a	n/a
9	ATF1	chr19:20012364-20012741	K562	blood:	n/a	n/a
10	ATF1	chr19:20010975-20011943	K562	blood:	n/a	n/a
11	ATF1	chr19:19976473-19977171	K562	blood:	n/a	n/a
12	ATF2	chr19:20012303-20012747	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr19:19887064-19887740	GM12878	blood:	n/a	n/a
14	ATF2	chr19:20011366-20011950	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr19:19976534-19976946	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr19:19932252-19932741	GM12878	blood:	n/a	n/a
17	ATF2	chr19:19934731-19935129	GM12878	blood:	n/a	n/a
18	ATF2	chr19:19932327-19932666	GM12878	blood:	n/a	n/a
19	ATF2	chr19:19977418-19977866	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr19:19971653-19972027	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr19:20012079-20012798	H1-hESC	embryonic stem cell:	n/a	n/a
22	ATF2	chr19:19976428-19977607	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF3	chr19:20010946-20011204	K562	blood:	n/a	n/a
24	ATF3	chr19:20011491-20011727	K562	blood:	n/a	n/a
25	BACH1	chr19:20011377-20011557	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr19:19889406-19889416	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr19:20011809-20012660	H1-hESC	embryonic stem cell:	n/a	n/a
28	BATF	chr19:19973573-19973772	GM12878	blood:	n/a	n/a
29	BATF	chr19:19984184-19984516	GM12878	blood:	n/a	chr19:19984348-19984358 chr19:19984347-19984358
30	BATF	chr19:19984156-19984440	GM12878	blood:	n/a	chr19:19984348-19984358 chr19:19984347-19984358
31	BATF	chr19:19922825-19923110	GM12878	blood:	n/a	chr19:19922977-19922988 chr19:19922978-19922988
32	BATF	chr19:19922866-19923100	GM12878	blood:	n/a	chr19:19922977-19922988 chr19:19922978-19922988
33	BATF	chr19:19965131-19965323	GM12878	blood:	n/a	chr19:19965243-19965253 chr19:19965242-19965253
34	BCL11A	chr19:19934745-19935130	GM12878	blood:	n/a	n/a
35	BCL11A	chr19:19934802-19935037	GM12878	blood:	n/a	n/a
36	BCL11A	chr19:20011709-20011998	GM12878	blood:	n/a	n/a
37	BCL3	chr19:19934765-19935109	GM12878	blood:	n/a	n/a
38	BCL3	chr19:19934825-19935064	GM12878	blood:	n/a	n/a
39	BCLAF1	chr19:19887018-19887820	GM12878	blood:	n/a	n/a
40	BCLAF1	chr19:19932104-19932702	GM12878	blood:	n/a	chr19:19932257-19932266
41	BCLAF1	chr19:19887004-19887990	GM12878	blood:	n/a	n/a
42	BCLAF1	chr19:19931948-19932740	GM12878	blood:	n/a	chr19:19932257-19932266
43	BCLAF1	chr19:19934717-19935152	GM12878	blood:	n/a	n/a
44	BHLHE40	chr19:19976532-19977185	GM12878	blood:	n/a	n/a
45	BHLHE40	chr19:19934804-19935040	GM12878	blood:	n/a	n/a
46	BHLHE40	chr19:19887063-19887701	K562	blood:	n/a	n/a
47	BHLHE40	chr19:20011257-20011777	GM12878	blood:	n/a	n/a
48	BHLHE40	chr19:19887076-19888029	GM12878	blood:	n/a	n/a
49	BHLHE40	chr19:19976605-19977041	K562	blood:	n/a	n/a
50	BHLHE40	chr19:20011137-20012501	K562	blood:	n/a	n/a

(count:2688 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:19887762-19887812	HCM	heart:	n/a
2	chr19:19887486-19887536	GM12891	blood:	n/a
3	chr19:19971704-19971754	RPTEC	kidney:	n/a
4	chr19:20004152-20004202	HIPEpiC	eye:	n/a
5	chr19:19887762-19887812	HCM	heart:	n/a
6	chr19:19887486-19887536	GM12891	blood:	n/a
7	chr19:19971704-19971754	RPTEC	kidney:	n/a
8	chr19:20004152-20004202	HIPEpiC	eye:	n/a
9	chr19:19903883-19903933	NHBE	bronchial:	n/a
10	chr19:19932608-19932658	AG09319	gingival:	n/a
11	chr19:19976784-19976834	A549	lung:	n/a
12	chr19:19932695-19932745	AG10803	skin:	n/a
13	chr19:19971704-19971754	GM19239	blood:	n/a
14	chr19:19887484-19887534	BE2_C	brain:	n/a
15	chr19:19887377-19887427	ProgFib	skin:	n/a
16	chr19:19976569-19976619	SKMC	muscle:	n/a
17	chr19:20011538-20011588	A549	lung:	n/a
18	chr19:20011770-20011820	HAEpiC	amniotic membrane:	n/a
19	chr19:19932695-19932745	SK-N-SH	brain:	n/a
20	chr19:19976606-19976656	MCF-7	breast:	n/a
21	chr19:19976784-19976834	HUVEC	blood vessel:	n/a
22	chr19:19932565-19932615	U87	brain:	n/a
23	chr19:19887382-19887432	NT2-D1	testis:	n/a
24	chr19:19933646-19933696	HEK293	kidney:	embryo
25	chr19:19932543-19932593	GM12891	blood:	n/a
26	chr19:20011721-20011771	U87	brain:	n/a
27	chr19:19976679-19976729	CMK	blood:	n/a
28	chr19:20012489-20012539	SK-N-SH_RA	brain:	n/a
29	chr19:19976679-19976729	SKMC	muscle:	n/a
30	chr19:19971578-19971628	HepG2	liver:	n/a
31	chr19:19977733-19977783	K562	blood:	n/a
32	chr19:19971862-19971912	BJ	skin:	n/a
33	chr19:19887377-19887427	HRE	kidney:	n/a
34	chr19:20012331-20012381	NHBE	bronchial:	n/a
35	chr19:19932622-19932672	SK-N-MC	brain:	n/a
36	chr19:19971704-19971754	NT2-D1	testis:	n/a
37	chr19:19976598-19976648	NH-A	brain:	n/a
38	chr19:19932695-19932745	ovcar-3	ovarian:	n/a
39	chr19:20011721-20011771	CMK	blood:	n/a
40	chr19:19976638-19976688	AG10803	skin:	n/a
41	chr19:19977733-19977783	HL-60	blood:	n/a
42	chr19:19976598-19976648	HRPEpiC	eye:	n/a
43	chr19:19903883-19903933	AG10803	skin:	n/a
44	chr19:19887762-19887812	BJ	skin:	n/a
45	chr19:20004152-20004202	HNPCEpiC	eye:	n/a
46	chr19:19933192-19933242	IMR90	lung:	fetal
47	chr19:19976569-19976619	HRCEpiC	kidney:	n/a
48	chr19:20011653-20011703	GM12892	blood:	n/a
49	chr19:19887432-19887482	SK-N-SH_RA	brain:	n/a
50	chr19:19887256-19887306	ovcar-3	ovarian:	n/a

(count:45 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:19861019..19863618-chr19:19865280..19868048,2	K562	blood:
2	chr19:20002691..20004301-chr19:20008482..20010852,2	K562	blood:
3	chr19:19976692..19979119-chr19:20011140..20013486,2	K562	blood:
4	chr19:20015522..20017242-chr19:20021366..20023292,2	MCF-7	breast:
5	chr19:19976218..19978192-chr19:20011161..20013662,4	K562	blood:
6	chr19:19857908..19860504-chr19:19872011..19873705,2	K562	blood:
7	chr19:19869687..19871477-chr19:19882175..19885147,2	MCF-7	breast:
8	chr19:19947704..19949744-chr19:19979333..19982219,2	K562	blood:
9	chr19:19883643..19885165-chr19:19885251..19887298,2	MCF-7	breast:
10	chr19:19879921..19882516-chr19:19887108..19889715,2	MCF-7	breast:
11	chr19:19975991..19979508-chr19:19981059..19984923,4	K562	blood:
12	chr19:20012861..20014472-chr19:20018867..20021328,2	K562	blood:
13	chr19:19981948..19986112-chr19:19987486..19990796,4	K562	blood:
14	chr19:19975352..19978729-chr19:19985760..19988418,3	K562	blood:
15	chr19:19779650..19782100-chr19:19976513..19978467,2	MCF-7	breast:
16	chr19:19869687..19871477-chr19:19882175..19885147,2	MCF-7	breast:
17	chr19:19857732..19859328-chr19:19976906..19978604,2	MCF-7	breast:
18	chr19:19772600..19774395-chr19:19886060..19888388,2	MCF-7	breast:
19	chr19:19843760..19845280-chr19:19896423..19898782,2	K562	blood:
20	chr19:19975991..19979508-chr19:19981059..19984923,4	K562	blood:
21	chr19:19970667..19974781-chr19:19975210..19979739,6	K562	blood:
22	chr1:43164363..43165895-chr19:19923263..19926242,2	K562	blood:
23	chr19:19650831..19653075-chr19:20010995..20012617,3	K562	blood:
24	chr19:19976218..19978192-chr19:20011161..20013662,4	K562	blood:
25	chr19:19976692..19979119-chr19:20011140..20013486,2	K562	blood:
26	chr19:20004584..20007360-chr19:20011373..20013192,2	K562	blood:
27	chr19:19977897..19980887-chr19:19981343..19982993,2	K562	blood:
28	chr19:20002691..20004301-chr19:20008482..20010852,2	K562	blood:
29	chr19:20012007..20015625-chr19:20016618..20018648,3	K562	blood:
30	chr19:20004584..20007360-chr19:20011373..20013192,2	K562	blood:
31	chr19:20012861..20014472-chr19:20018867..20021328,2	K562	blood:
32	chr19:19927559..19930020-chr19:19975379..19977771,2	MCF-7	breast:
33	chr19:19774128..19775770-chr19:19988439..19991288,2	K562	blood:
34	chr19:19885449..19887952-chr19:19901599..19903328,2	MCF-7	breast:
35	chr19:19842402..19846588-chr19:19867933..19871933,3	MCF-7	breast:
36	chr19:19976277..19977796-chr19:19982374..19984542,2	MCF-7	breast:
37	chr19:19995776..19998692-chr19:20011015..20014104,3	K562	blood:
38	chr19:19976024..19978214-chr19:19983423..19985859,2	K562	blood:
39	chr19:19971677..19974532-chr19:19975356..19978312,2	MCF-7	breast:
40	chr19:19966687..19968532-chr19:19975349..19978266,2	MCF-7	breast:
41	chr19:20011703..20012262-chr20:3748393..3749228,2	NB4	blood:
42	chr19:19779787..19782276-chr19:19989567..19991864,2	K562	blood:
43	chr19:19966687..19968532-chr19:19975349..19978266,2	MCF-7	breast:
44	chr19:20012007..20015625-chr19:20016618..20018648,3	K562	blood:
45	chr19:19981948..19986049-chr19:19987383..19989286,3	K562	blood:

(count:69 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF506-1	chr19:19887132-19887185	ENSG00000266904.1
2	lnc-ZNF506-6	chr19:19981532-19982108	NONHSAT063610
3	lnc-ZNF506-1	chr19:19884687-19887232	ENSG00000266904.1
4	lnc-ZNF506-1	chr19:19887136-19887222	ENSG00000266904.1
5	lnc-ZNF253-2	chr19:19900489-19900630	ENSG00000267419.1
6	lnc-ZNF506-1	chr19:19887136-19887189	ENSG00000266904.1
7	lnc-ZNF506-5	chr19:19969356-19970614	NONHSAT063607
8	lnc-ZNF506-2	chr19:20006280-20006656	ENSG00000267565.1
9	lnc-ZNF93-1	chr19:20011787-20011900	NONHSAT063615
10	lnc-ZNF506-1	chr19:19867916-19869355	ENSG00000228642
11	lnc-ZNF93-2	chr19:19989290-19989504	NONHSAT063609
12	lnc-ZNF506-1	chr19:19867185-19867496	ENSG00000228642
13	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000266904.1
14	lnc-ZNF506-1	chr19:19872013-19872230	ENSG00000266904.1
15	lnc-ZNF506-1	chr19:19887136-19887202	ENSG00000228642
16	lnc-ZNF506-1	chr19:19887136-19887189	ENSG00000228642
17	lnc-ZNF253-2	chr19:19899759-19899896	NONHSAT063598
18	lnc-ZNF93-1	chr19:20011722-20011900	NONHSAT063613
19	lnc-ZNF506-4	chr19:19902371-19902607	NONHSAT063600
20	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000228642
21	lnc-ZNF506-1	chr19:19869205-19869355	ENSG00000266904.1
22	lnc-ZNF253-2	chr19:19887633-19887803	ENSG00000267419.1
23	lnc-ZNF506-3	chr19:19899564-19899938	ENSG00000267481.1
24	lnc-ZNF253-2	chr19:19944282-19944408	ENSG00000267419.1
25	lnc-ZNF506-1	chr19:19873347-19873455	NONHSAT063584
26	lnc-ZNF253-2	chr19:19945713-19945736	ENSG00000267419.1
27	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000228642
28	lnc-ZNF253-2	chr19:19899759-19899881	ENSG00000267419.1
29	lnc-ZNF506-1	chr19:19868952-19869355	ENSG00000266904.1
30	lnc-ZNF253-2	chr19:19887411-19887803	ENSG00000267419.1
31	lnc-ZNF253-2	chr19:19897418-19897693	ENSG00000267419.1
32	lnc-ZNF506-1	chr19:19872066-19872230	ENSG00000228642
33	lnc-ZNF506-5	chr19:19971872-19972019	NONHSAT063607
34	lnc-ZNF506-1	chr19:19887132-19887203	ENSG00000266904.1
35	lnc-ZNF506-4	chr19:19897741-19897940	NONHSAT063600
36	lnc-ZNF253-1	chr19:19967784-19968336	NONHSAT063606
37	lnc-ZNF506-2	chr19:20005974-20008579	ENSG00000245381
38	lnc-ZNF253-2	chr19:19887504-19887803	NONHSAT063599
39	lnc-ZNF93-2	chr19:19976727-19976808	NONHSAT063609
40	lnc-ZNF506-1	chr19:19868592-19869355	ENSG00000266904.1
41	lnc-ZNF506-1	chr19:19868610-19869355	NONHSAT063584
42	lnc-ZNF506-1	chr19:19872066-19872230	ENSG00000266904.1
43	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000266904.1
44	lnc-ZNF253-2	chr19:19917090-19917185	ENSG00000267419.1
45	lnc-ZNF93-1	chr19:20011777-20011848	ENSG00000267268.1
46	lnc-ZNF506-3	chr19:19900795-19901340	ENSG00000267481.1
47	lnc-ZNF253-2	chr19:19887580-19887803	NONHSAT063595
48	lnc-ZNF253-2	chr19:19897418-19897648	NONHSAT063598
49	lnc-ZNF253-2	chr19:19897418-19897657	NONHSAT063595
50	lnc-ZNF506-1	chr19:19871967-19872230	ENSG00000266904.1

No data

Variant related genes	Relation type
ZNF93	TF binding region
ENSG00000267481	TF binding region
ENSG00000267693	TF binding region
ZNF506	TF binding region
ENSG00000267268	TF binding region
ENSG00000270325	TF binding region
ZNF253	TF binding region
ENSG00000265339	TF binding region
ENSG00000267419	TF binding region
ENSG00000267581	TF binding region
LINC00663	TF binding region
ENSG00000270270	TF binding region
ENSG00000267565	TF binding region
ZNF93	CpG island
ENSG00000267481	CpG island
ENSG00000267693	CpG island
ZNF506	CpG island
ENSG00000267268	CpG island
ENSG00000270325	CpG island
ZNF253	CpG island
ENSG00000265339	CpG island
ENSG00000267419	CpG island
ENSG00000267581	CpG island
LINC00663	CpG island
ENSG00000270270	CpG island
ENSG00000267565	CpG island
ENSG00000256771	chromatin interactions
ENSG00000105708	chromatin interactions
ENSG00000184635	chromatin interactions
ENSG00000105726	chromatin interactions
ENSG00000160161	chromatin interactions
ENSG00000181896	chromatin interactions
ENSG00000267565	chromatin interactions
ENSG00000266904	chromatin interactions
ENSG00000270270	chromatin interactions
ENSG00000271499	chromatin interactions
ENSG00000267268	chromatin interactions
ENSG00000270325	chromatin interactions
ENSG00000267419	chromatin interactions
ENSG00000101220	chromatin interactions
MYCN	miRNA target sites
NR3C2	miRNA target sites
PDRG1	miRNA target sites
RPRD2	miRNA target sites
CGN	miRNA target sites
CXADR	miRNA target sites
SON	miRNA target sites
GTF2IRD2	miRNA target sites

Extended variants
information (count: 5652 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:5652 , 50 per page) page: 1 2 3 4 5 6 7 ... 114

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7251035	chr19:19866371-19866372	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs533105112	chr19:19866381-19866382	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs532811666	chr19:19866385-19866386	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs546097367	chr19:19866429-19866430	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs145142538	chr19:19866446-19866447	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs369054133	chr19:19866460-19866461	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs139026889	chr19:19866570-19866571	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs568105322	chr19:19866654-19866655	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs530533322	chr19:19866655-19866656	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs184865416	chr19:19866725-19866726	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs35844933	chr19:19866730-19866731	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs539702246	chr19:19866806-19866807	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs528546473	chr19:19866823-19866824	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs552917538	chr19:19866838-19866839	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs566325491	chr19:19866856-19866857	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs534830748	chr19:19866875-19866876	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs247784	chr19:19866889-19866890	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	mRNA abundance
18	rs189749064	chr19:19866928-19866929	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs543474512	chr19:19866999-19867000	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs78192660	chr19:19867055-19867056	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs577501731	chr19:19867056-19867057	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs531911363	chr19:19867067-19867068	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs7251042	chr19:19867071-19867072	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs370327698	chr19:19867086-19867087	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs568553754	chr19:19867087-19867088	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs560036664	chr19:19867172-19867173	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs28569436	chr19:19867218-19867219	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
28	rs115340320	chr19:19867229-19867230	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
29	rs561772473	chr19:19867241-19867242	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
30	rs530589865	chr19:19867244-19867245	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
31	rs73526713	chr19:19867284-19867285	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
32	rs368000407	chr19:19867323-19867324	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs60581650	chr19:19867324-19867325	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs397945765	chr19:19867343-19867344	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs564085709	chr19:19867348-19867349	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs537205173	chr19:19867362-19867363	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs533121052	chr19:19867373-19867374	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs546862819	chr19:19867388-19867389	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs566388189	chr19:19867389-19867390	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs535271619	chr19:19867390-19867391	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs247783	chr19:19867394-19867395	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs568231419	chr19:19867403-19867404	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs537537406	chr19:19867419-19867420	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs557106360	chr19:19867471-19867472	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs374343816	chr19:19867475-19867476	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs368602392	chr19:19867479-19867480	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs547255086	chr19:19867480-19867481	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs571156026	chr19:19867481-19867482	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs573533970	chr19:19867486-19867487	Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs371944226	chr19:19867503-19867504	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Prostate cancer	16573809	CNVD
Lung cancer	17297452	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Basal cell lymphoma	21115979	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21364760	CNVD
Acute monocytic leukemia	16498392	CNVD
Lung cancer	18438408	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Cancer	17440070	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Nasopharyngeal cancer	20548289	CNVD
Breast cancer	22522925	CNVD
Amyotrophic lateral sclerosis	20685689	CNVD
Pancreatic cancer	17952125	CNVD
Schizophrenia	20967226	CNVD
Melanoma	20877625	CNVD
Colorectal cancer	20459617	CNVD

Chromatin state (count:4522 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:19859800-19870800	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr19:19861000-19875000	Weak transcription	Brain Angular Gyrus	brain
3	chr19:19862200-19869200	Weak transcription	Gastric	stomach
4	chr19:19862400-19869000	Weak transcription	Spleen	Spleen
5	chr19:19862800-19874000	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr19:19862800-19886400	Weak transcription	Pancreas	Pancrea
7	chr19:19865200-19886400	Weak transcription	Right Ventricle	heart
8	chr19:19865400-19873800	Weak transcription	Ovary	ovary
9	chr19:19865600-19879000	Weak transcription	Brain Substantia Nigra	brain
10	chr19:19866200-19868600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr19:19866200-19886000	Weak transcription	Brain Hippocampus Middle	brain
12	chr19:19866600-19868400	Weak transcription	Brain Cingulate Gyrus	brain
13	chr19:19866800-19867000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr19:19866800-19868400	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr19:19867000-19868600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr19:19867200-19875000	Weak transcription	Left Ventricle	heart
17	chr19:19867600-19870800	Weak transcription	Fetal Muscle Leg	muscle
18	chr19:19867800-19868800	Weak transcription	Adipose Nuclei	Adipose
19	chr19:19867800-19870200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr19:19867800-19875000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr19:19868000-19868400	Weak transcription	Liver	Liver
22	chr19:19868000-19871200	Weak transcription	Aorta	Aorta
23	chr19:19868400-19869200	Strong transcription	Liver	Liver
24	chr19:19868400-19869200	Strong transcription	Brain Inferior Temporal Lobe	brain
25	chr19:19868400-19869400	Strong transcription	Brain Cingulate Gyrus	brain
26	chr19:19868600-19869400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr19:19868600-19870400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
28	chr19:19868800-19869000	ZNF genes & repeats	Adipose Nuclei	Adipose
29	chr19:19869000-19869200	Enhancers	Spleen	Spleen
30	chr19:19869000-19875000	Weak transcription	Adipose Nuclei	Adipose
31	chr19:19869200-19869400	ZNF genes & repeats	Gastric	stomach
32	chr19:19869200-19871800	Weak transcription	Liver	Liver
33	chr19:19869200-19873400	Weak transcription	Brain Inferior Temporal Lobe	brain
34	chr19:19869400-19886400	Weak transcription	Brain Cingulate Gyrus	brain
35	chr19:19870200-19876000	Weak transcription	Primary T helper cells PMA-I stimulated	--
36	chr19:19870400-19885400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
37	chr19:19871800-19872400	ZNF genes & repeats	Liver	Liver
38	chr19:19872000-19872400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr19:19875000-19875400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr19:19875000-19875600	Enhancers	Adipose Nuclei	Adipose
41	chr19:19879000-19879400	Enhancers	Brain Substantia Nigra	brain
42	chr19:19879400-19886200	Weak transcription	Brain Substantia Nigra	brain
43	chr19:19881200-19886400	Weak transcription	Stomach Smooth Muscle	stomach
44	chr19:19881400-19886400	Weak transcription	NH-A	brain
45	chr19:19882200-19882600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr19:19882400-19882600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
47	chr19:19882600-19885400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
48	chr19:19883400-19886400	Weak transcription	NHDF-Ad	bronchial
49	chr19:19884400-19885800	Enhancers	Fetal Intestine Large	intestine
50	chr19:19884800-19886200	Enhancers	Dnd41	blood

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