Variant report

Variant	nsv911420
Chromosome Location	chr19:21454672-21613397
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1502)
CpG islands
(count:2139)
Chromatin interactive
region (count:31)
LncRNA
region (count:30)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:1502 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:21511352-21511789	K562	blood:	n/a	n/a
2	ARID3A	chr19:21505863-21506155	K562	blood:	n/a	n/a
3	ARID3A	chr19:21511981-21512446	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:21541510-21541771	HepG2	liver:	n/a	n/a
5	ATF1	chr19:21516826-21516854	K562	blood:	n/a	n/a
6	ATF1	chr19:21579646-21580081	K562	blood:	n/a	n/a
7	ATF1	chr19:21512075-21512439	K562	blood:	n/a	n/a
8	ATF2	chr19:21512025-21512405	GM12878	blood:	n/a	n/a
9	ATF2	chr19:21579789-21580107	GM12878	blood:	n/a	n/a
10	BACH1	chr19:21511633-21511637	K562	blood:	n/a	n/a
11	BATF	chr19:21512047-21512392	GM12878	blood:	n/a	n/a
12	BATF	chr19:21497495-21497696	GM12878	blood:	n/a	chr19:21497586-21497597 chr19:21497587-21497597
13	BATF	chr19:21497419-21497765	GM12878	blood:	n/a	chr19:21497586-21497597 chr19:21497587-21497597
14	BCLAF1	chr19:21511700-21512480	GM12878	blood:	n/a	chr19:21511749-21511762
15	BCLAF1	chr19:21511741-21512420	GM12878	blood:	n/a	chr19:21511749-21511762
16	BHLHE40	chr19:21511144-21511449	GM12878	blood:	n/a	n/a
17	BHLHE40	chr19:21563870-21563999	K562	blood:	n/a	chr19:21563932-21563945 chr19:21563928-21563949
18	BHLHE40	chr19:21579653-21580139	GM12878	blood:	n/a	n/a
19	BHLHE40	chr19:21541603-21542196	GM12878	blood:	n/a	n/a
20	BHLHE40	chr19:21579656-21580269	K562	blood:	n/a	n/a
21	BHLHE40	chr19:21511805-21512401	K562	blood:	n/a	n/a
22	BHLHE40	chr19:21511934-21512494	GM12878	blood:	n/a	n/a
23	BRCA1	chr19:21512062-21512389	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr19:21511953-21512347	GM12878	blood:	n/a	n/a
25	CBX3	chr19:21511688-21512473	K562	blood:	n/a	n/a
26	CBX3	chr19:21518494-21518875	K562	blood:	n/a	n/a
27	CBX3	chr19:21579599-21580218	K562	blood:	n/a	n/a
28	CBX3	chr19:21579619-21579995	K562	blood:	n/a	n/a
29	CBX3	chr19:21518473-21518918	K562	blood:	n/a	n/a
30	CBX3	chr19:21512080-21512432	K562	blood:	n/a	n/a
31	CCNT2	chr19:21511735-21512332	K562	blood:	n/a	n/a
32	CEBPB	chr19:21592999-21593274	IMR90	lung:	n/a	chr19:21593151-21593162
33	CEBPB	chr19:21593062-21593258	H1-hESC	embryonic stem cell:	n/a	chr19:21593151-21593162
34	CEBPB	chr19:21541564-21541741	K562	blood:	n/a	n/a
35	CEBPB	chr19:21508950-21509264	IMR90	lung:	n/a	n/a
36	CEBPB	chr19:21491621-21491976	HepG2	liver:	n/a	chr19:21491789-21491800
37	CEBPB	chr19:21593034-21593270	HepG2	liver:	n/a	chr19:21593151-21593162
38	CEBPB	chr19:21499024-21499025	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr19:21541453-21541975	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr19:21579663-21579947	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr19:21541467-21541799	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr19:21540715-21540842	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr19:21541478-21541829	IMR90	lung:	n/a	n/a
44	CEBPB	chr19:21505077-21505265	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr19:21579610-21579985	HepG2	liver:	n/a	n/a
46	CEBPB	chr19:21579613-21579962	K562	blood:	n/a	n/a
47	CEBPB	chr19:21531522-21531558	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPB	chr19:21491642-21491967	IMR90	lung:	n/a	chr19:21491789-21491800
49	CEBPB	chr19:21491681-21491898	H1-hESC	embryonic stem cell:	n/a	chr19:21491789-21491800
50	CEBPB	chr19:21579629-21579973	IMR90	lung:	n/a	n/a

(count:2139 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:21512202-21512252	GM12892	blood:	n/a
2	chr19:21541917-21541967	ProgFib	skin:	n/a
3	chr19:21541765-21541815	A549	lung:	n/a
4	chr19:21512202-21512252	AoSMC	blood vessel:	n/a
5	chr19:21512202-21512252	GM12892	blood:	n/a
6	chr19:21541917-21541967	ProgFib	skin:	n/a
7	chr19:21541765-21541815	A549	lung:	n/a
8	chr19:21512202-21512252	AoSMC	blood vessel:	n/a
9	chr19:21512166-21512216	ProgFib	skin:	n/a
10	chr19:21541044-21541094	H1-hESC	embryonic stem cell:	embryo
11	chr19:21541765-21541815	AG09309	skin:	n/a
12	chr19:21540538-21540588	A549	lung:	n/a
13	chr19:21579833-21579883	SK-N-SH_RA	brain:	n/a
14	chr19:21579833-21579883	HEEpiC	esophagus:	n/a
15	chr19:21512191-21512241	PFSK-1	brain:	n/a
16	chr19:21512141-21512191	HRPEpiC	eye:	n/a
17	chr19:21540538-21540588	U87	brain:	n/a
18	chr19:21512191-21512241	ProgFib	skin:	n/a
19	chr19:21608124-21608174	LNCaP	prostate:	n/a
20	chr19:21580086-21580136	MCF-7	breast:	n/a
21	chr19:21608124-21608174	ovcar-3	ovarian:	n/a
22	chr19:21579993-21580043	IMR90	lung:	fetal
23	chr19:21579911-21579961	AG10803	skin:	n/a
24	chr19:21512166-21512216	GM06990	blood:	n/a
25	chr19:21579902-21579952	Caco-2	colon:	n/a
26	chr19:21578450-21578500	LNCaP	prostate:	n/a
27	chr19:21579911-21579961	PFSK-1	brain:	n/a
28	chr19:21512141-21512191	HAEpiC	amniotic membrane:	n/a
29	chr19:21578450-21578500	SK-N-MC	brain:	n/a
30	chr19:21512166-21512216	AG09309	skin:	n/a
31	chr19:21591496-21591546	AG09309	skin:	n/a
32	chr19:21512127-21512177	HEK293	kidney:	embryo
33	chr19:21541044-21541094	HL-60	blood:	n/a
34	chr19:21512258-21512308	Hepatocyte	liver:	n/a
35	chr19:21591496-21591546	SK-N-SH	brain:	n/a
36	chr19:21512191-21512241	AG09319	gingival:	n/a
37	chr19:21541035-21541085	HL-60	blood:	n/a
38	chr19:21541537-21541587	PFSK-1	brain:	n/a
39	chr19:21579877-21579927	HMEC	breast:	n/a
40	chr19:21512378-21512428	U87	brain:	n/a
41	chr19:21541772-21541822	HMEC	breast:	n/a
42	chr19:21579862-21579912	SAEC	small airway:	n/a
43	chr19:21579902-21579952	AG04450	lung:	fetal
44	chr19:21579953-21580003	U87	brain:	n/a
45	chr19:21541917-21541967	BJ	skin:	n/a
46	chr19:21541699-21541749	HUVEC	blood vessel:	n/a
47	chr19:21579902-21579952	U87	brain:	n/a
48	chr19:21580086-21580136	HCM	heart:	n/a
49	chr19:21512191-21512241	AG09309	skin:	n/a
50	chr19:21608124-21608174	NT2-D1	testis:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:21462003..21463957-chr19:21465037..21467413,2	MCF-7	breast:
2	chr19:21462003..21463957-chr19:21465037..21467413,2	MCF-7	breast:
3	chr19:21573567..21575254-chr19:21579047..21580611,2	K562	blood:
4	chr19:21510924..21513197-chr19:21688433..21691004,2	MCF-7	breast:
5	chr19:21458436..21458960-chr5:35617140..35617799,2	Hela-S3	cervix:
6	chr19:21482877..21485011-chr19:21492555..21495180,2	K562	blood:
7	chr19:21552085..21554128-chr19:21570405..21572893,2	K562	blood:
8	chr19:21501353..21503397-chr19:21510480..21512126,2	MCF-7	breast:
9	chr19:21520831..21523621-chr19:21524615..21527542,2	K562	blood:
10	chr19:21552085..21554128-chr19:21570405..21572893,2	K562	blood:
11	chr19:21579150..21580726-chr19:21585084..21587356,2	MCF-7	breast:
12	chr19:21504637..21507576-chr19:21510636..21512879,2	MCF-7	breast:
13	chr19:21581402..21583289-chr19:21587139..21589283,2	K562	blood:
14	chr19:21264733..21265247-chr19:21541544..21542206,2	NB4	blood:
15	chr19:21578623..21581183-chr19:21590706..21592354,2	MCF-7	breast:
16	chr19:21596819..21599115-chr19:21600673..21603133,2	MCF-7	breast:
17	chr19:21596819..21599115-chr19:21600673..21603133,2	MCF-7	breast:
18	chr19:21503005..21505616-chr19:21507489..21509547,2	K562	blood:
19	chr19:21578989..21580670-chr19:21582551..21584236,2	K562	blood:
20	chr19:21496090..21497696-chr19:21505089..21507534,2	K562	blood:
21	chr19:21500655..21502261-chr19:21504561..21506244,2	K562	blood:
22	chr19:21324747..21325334-chr19:21541551..21542092,2	Hela-S3	cervix:
23	chr19:21511256..21513599-chr19:21513725..21515814,2	MCF-7	breast:
24	chr19:21511427..21512224-chr9:140135317..140136194,2	Hela-S3	cervix:
25	chr19:21501353..21503397-chr19:21510480..21512126,2	MCF-7	breast:
26	chr19:21482877..21485011-chr19:21492555..21495180,2	K562	blood:
27	chr19:21584484..21588831-chr19:21589336..21593568,7	K562	blood:
28	chr19:21496090..21497696-chr19:21505089..21507534,2	K562	blood:
29	chr19:21509704..21512429-chr19:21517111..21519937,3	K562	blood:
30	chr19:21503005..21505616-chr19:21507489..21509547,2	K562	blood:
31	chr19:21520831..21523621-chr19:21524615..21527542,2	K562	blood:

(count:30 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF738-1	chr19:21560191-21571384	NR_027130
2	lnc-ZNF738-1	chr19:21541735-21541945	NR_027130
3	lnc-ZNF708-7	chr19:21544979-21546181	ucscGeneNc_uc002nqe_1
4	lnc-ZNF708-6	chr19:21555198-21557246	ucscGeneNc_uc002nqf_1
5	lnc-ZNF708-8	chr19:21562076-21562253	ucscGeneNc_uc002nqg_2
6	lnc-ZNF708-8	chr19:21566420-21568648	ucscGeneNc_uc002nqg_2
7	lnc-ZNF738-1	chr19:21558040-21558166	NR_027130
8	lnc-ZNF708-1	chr19:21605958-21608304	ENSG00000196686
9	lnc-ZNF738-1	chr19:21544568-21544660	NR_027130
10	lnc-ZNF738-5	chr19:21475913-21477566	ucscGeneNc_uc002nqb_2
11	lnc-ZNF708-5	chr19:21458825-21459134	NONHSAT063694
12	lnc-ZNF738-5	chr19:21471294-21471364	ucscGeneNc_uc002nqb_2
13	lnc-ZNF738-3	chr19:21500963-21501521	NONHSAT063699
14	lnc-ZNF738-5	chr19:21469736-21469849	ucscGeneNc_uc002nqb_2
15	lnc-ZNF738-2	chr19:21594742-21597401	NONHSAT063703
16	lnc-ZNF708-7	chr19:21561505-21561885	ucscGeneNc_uc002nqe_1
17	lnc-ZNF738-5	chr19:21460747-21460795	ucscGeneNc_uc002nqb_2
18	lnc-ZNF738-4	chr19:21605715-21605751	NONHSAT063702
19	lnc-ZNF708-4	chr19:21472356-21472800	NONHSAT063695
20	lnc-ZNF738-5	chr19:21465851-21465953	ucscGeneNc_uc002nqb_2
21	lnc-ZNF738-5	chr19:21458357-21458648	ucscGeneNc_uc002nqb_2
22	lnc-ZNF738-4	chr19:21588080-21588658	NONHSAT063702
23	lnc-ZNF738-5	chr19:21464307-21464412	ucscGeneNc_uc002nqb_2
24	lnc-ZNF738-5	chr19:21465045-21465156	ucscGeneNc_uc002nqb_2
25	lnc-ZNF738-1	chr19:21558671-21558766	NR_027130
26	lnc-ZNF708-1	chr19:21608886-21610284	ENSG00000196686
27	lnc-ZNF708-3	chr19:21473948-21474588	NONHSAT063696
28	lnc-ZNF738-5	chr19:21467908-21468489	ucscGeneNc_uc002nqb_2
29	lnc-ZNF738-5	chr19:21472841-21472991	ucscGeneNc_uc002nqb_2
30	lnc-ZNF738-5	chr19:21468762-21468973	ucscGeneNc_uc002nqb_2

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZNF493	hsa-miR-155-5p	chr19:21610187-21610212

Variant related genes	Relation type
ENSG00000269237	TF binding region
VN1R83P	TF binding region
ZNF738	TF binding region
ENSG00000213976	TF binding region
ZNF493	TF binding region
ENSG00000268322	TF binding region
ZNF708	TF binding region
ENSG00000268731	TF binding region
ENSG00000268747	TF binding region
ENSG00000269237	CpG island
VN1R83P	CpG island
ZNF738	CpG island
ENSG00000213976	CpG island
ZNF493	CpG island
ENSG00000268322	CpG island
ZNF708	CpG island
ENSG00000268731	CpG island
ENSG00000268747	CpG island
ENSG00000188229	chromatin interactions
ENSG00000196268	chromatin interactions
ENSG00000197013	chromatin interactions
ENSG00000160352	chromatin interactions
ENSG00000182141	chromatin interactions
ENSG00000268322	chromatin interactions
ENSG00000196705	chromatin interactions
ENSG00000269237	chromatin interactions
TDP1	miRNA target sites
ZNF326	miRNA target sites

Extended variants
information (count: 5687 )
Associated
traits (count: 42 )

Variant overlapped rSNPs/rCNVs (count:5687 , 50 per page) page: 1 2 3 4 5 6 7 ... 114

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192840074	chr19:21455250-21455251	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs546904196	chr19:21455267-21455268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs567035862	chr19:21455286-21455287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs35619249	chr19:21455319-21455320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs531927556	chr19:21455324-21455325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs182597722	chr19:21455361-21455362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs508888	chr19:21455451-21455452	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs187205193	chr19:21455453-21455454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs537856769	chr19:21455458-21455459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs192138904	chr19:21455460-21455461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs577880795	chr19:21455479-21455480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs534079249	chr19:21455493-21455494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs553724352	chr19:21455509-21455510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs568908805	chr19:21455517-21455518	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs570969408	chr19:21455534-21455535	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs542798380	chr19:21455593-21455594	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs184678610	chr19:21455603-21455604	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs78932958	chr19:21455629-21455630	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs576173106	chr19:21455648-21455649	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs150169346	chr19:21455654-21455655	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs117753968	chr19:21455656-21455657	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs190832239	chr19:21455673-21455674	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs115806597	chr19:21455674-21455675	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs192243991	chr19:21455676-21455677	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs279793	chr19:21455774-21455775	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs529492077	chr19:21455788-21455789	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs549124156	chr19:21455790-21455791	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs375331863	chr19:21455791-21455792	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs537919935	chr19:21455796-21455797	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs1762562	chr19:21455812-21455813	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs571605807	chr19:21455907-21455908	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs1762561	chr19:21455972-21455973	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs554039326	chr19:21456076-21456077	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs77269771	chr19:21456077-21456078	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs536468179	chr19:21456202-21456203	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs556369466	chr19:21456206-21456207	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs576235295	chr19:21456212-21456213	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs545106280	chr19:21456225-21456226	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs111859915	chr19:21456242-21456243	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs564766192	chr19:21456243-21456244	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs371845408	chr19:21456244-21456245	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs540620676	chr19:21456265-21456266	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs560848871	chr19:21456289-21456290	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs555969807	chr19:21456310-21456311	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs529525621	chr19:21456327-21456328	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs184620319	chr19:21456341-21456342	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs189238360	chr19:21456366-21456367	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs138566211	chr19:21456376-21456377	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs551458859	chr19:21456379-21456380	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs181167655	chr19:21456411-21456412	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:42)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Schizophrenia	20967226	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:4492 , 50 per page) page: 1 2 3 4 5 6 7 ... 90

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:21455200-21455800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr19:21455600-21456400	ZNF genes & repeats	Liver	Liver
3	chr19:21455800-21456000	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr19:21456000-21456200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr19:21456200-21457600	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr19:21458600-21461200	ZNF genes & repeats	Liver	Liver
7	chr19:21458800-21459600	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr19:21460000-21460400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr19:21461000-21461800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr19:21465000-21496000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr19:21465400-21484600	ZNF genes & repeats	Liver	Liver
12	chr19:21467000-21472800	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
13	chr19:21467200-21470000	ZNF genes & repeats	Adipose Nuclei	Adipose
14	chr19:21467200-21489600	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr19:21468000-21474200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr19:21468600-21472800	Weak transcription	Left Ventricle	heart
17	chr19:21469400-21470000	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
18	chr19:21469400-21470000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr19:21469400-21472400	Weak transcription	HSMM	muscle
20	chr19:21469400-21474400	Weak transcription	Brain Inferior Temporal Lobe	brain
21	chr19:21469800-21470000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr19:21469800-21470000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr19:21470000-21472800	Weak transcription	Cortex derived primary cultured neurospheres	brain
24	chr19:21470000-21474400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr19:21470000-21474400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr19:21470600-21484200	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
27	chr19:21471200-21474200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr19:21471200-21474400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr19:21471200-21479800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
30	chr19:21471400-21473600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr19:21471600-21472600	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr19:21471600-21474800	Weak transcription	Brain Germinal Matrix	brain
33	chr19:21471600-21479800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr19:21472000-21476400	Weak transcription	Osteobl	bone
35	chr19:21472000-21481800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr19:21472200-21474400	Weak transcription	NH-A	brain
37	chr19:21472200-21487600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr19:21472200-21490400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr19:21472400-21472600	ZNF genes & repeats	HSMMtube	muscle
40	chr19:21472400-21472800	ZNF genes & repeats	HSMM	muscle
41	chr19:21472400-21475200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr19:21472600-21472800	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr19:21472600-21472800	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr19:21472600-21472800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr19:21472600-21473000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
46	chr19:21472600-21473000	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr19:21472600-21473200	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
48	chr19:21472600-21474200	Weak transcription	HSMMtube	muscle
49	chr19:21472800-21473000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
50	chr19:21472800-21473000	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links