No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs140308330 |
chr19:22233815-22233816 |
Inactive region
|
CpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs190808791 |
chr19:22233853-22233854 |
Inactive region
|
CpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs568110414 |
chr19:22233855-22233856 |
Inactive region
|
CpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs8108152 |
chr19:22234201-22234202 |
Enhancers Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
5 |
rs79150271 |
chr19:22234293-22234294 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs143811485 |
chr19:22234396-22234397 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs111270824 |
chr19:22234403-22234404 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs375775407 |
chr19:22234407-22234408 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs71180514 |
chr19:22234426-22234427 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs555127186 |
chr19:22234433-22234434 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs531553383 |
chr19:22234434-22234435 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs387156 |
chr19:22234450-22234451 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs417331 |
chr19:22234478-22234479 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
14 |
rs543831529 |
chr19:22234488-22234489 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs568158982 |
chr19:22234493-22234494 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs565866887 |
chr19:22234496-22234497 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs114390555 |
chr19:22234503-22234504 |
Enhancers Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs551730449 |
chr19:22234559-22234560 |
Enhancers Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs192176568 |
chr19:22234570-22234571 |
Enhancers Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs564085586 |
chr19:22234582-22234583 |
Enhancers Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs417066 |
chr19:22234589-22234590 |
Enhancers Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
22 |
rs556108562 |
chr19:22234664-22234665 |
Active TSS Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs182636965 |
chr19:22234681-22234682 |
Active TSS Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs540129664 |
chr19:22234731-22234732 |
Active TSS Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs187708293 |
chr19:22234752-22234753 |
Active TSS Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs367280 |
chr19:22234788-22234789 |
Active TSS Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
27 |
rs572085048 |
chr19:22234806-22234807 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs545879744 |
chr19:22234822-22234823 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs386388744 |
chr19:22234843-22234844 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs55957917 |
chr19:22234853-22234854 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs141037224 |
chr19:22234862-22234863 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs576194592 |
chr19:22234907-22234908 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs366863 |
chr19:22234928-22234929 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
34 |
rs369315582 |
chr19:22234932-22234933 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs416312 |
chr19:22234938-22234939 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
36 |
rs366849 |
chr19:22234941-22234942 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs192710961 |
chr19:22234944-22234945 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs62112955 |
chr19:22234959-22234960 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs370265814 |
chr19:22234983-22234984 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs551859139 |
chr19:22234990-22234991 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs570016001 |
chr19:22234994-22234995 |
Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs531153998 |
chr19:22235052-22235053 |
ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs138136455 |
chr19:22235094-22235095 |
ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs567993591 |
chr19:22235115-22235116 |
ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs377755352 |
chr19:22235167-22235168 |
ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs535325598 |
chr19:22235204-22235205 |
Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs553850205 |
chr19:22235237-22235238 |
Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs565672934 |
chr19:22235282-22235283 |
Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs539024475 |
chr19:22235297-22235298 |
Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs557850159 |
chr19:22235304-22235305 |
Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|