Variant report

Variant	nsv911636
Chromosome Location	chr19:36240960-36290977
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1508)
CpG islands
(count:2623)
Chromatin interactive
region (count:83)
LncRNA
region (count:34)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1508 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:36248751-36249135	K562	blood:	n/a	n/a
2	ARID3A	chr19:36248961-36249462	HepG2	liver:	n/a	n/a
3	ATF1	chr19:36248703-36249119	K562	blood:	n/a	n/a
4	ATF2	chr19:36248707-36249312	GM12878	blood:	n/a	n/a
5	ATF2	chr19:36249154-36249506	GM12878	blood:	n/a	n/a
6	ATF3	chr19:36288621-36288807	K562	blood:	n/a	n/a
7	ATF3	chr19:36248243-36248551	K562	blood:	n/a	n/a
8	ATF3	chr19:36248653-36249536	A549	lung:	n/a	chr19:36248689-36248697 chr19:36249002-36249011
9	BACH1	chr19:36258950-36259256	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr19:36246283-36246801	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr19:36288281-36288350	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr19:36249169-36249369	K562	blood:	n/a	n/a
13	BACH1	chr19:36247024-36247390	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr19:36266255-36266838	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr19:36275752-36276005	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr19:36282622-36282875	GM12878	blood:	n/a	n/a
17	BCL3	chr19:36265316-36266349	A549	lung:	n/a	chr19:36266281-36266290 chr19:36266264-36266273
18	BCL3	chr19:36247965-36249675	A549	lung:	n/a	chr19:36249091-36249100
19	BCL3	chr19:36247910-36249677	A549	lung:	n/a	chr19:36249091-36249100
20	BHLHE40	chr19:36266035-36266535	K562	blood:	n/a	chr19:36266441-36266457 chr19:36266433-36266449
21	BHLHE40	chr19:36287509-36287696	A549	lung:	n/a	n/a
22	BHLHE40	chr19:36248756-36249489	K562	blood:	n/a	n/a
23	BHLHE40	chr19:36266278-36266534	GM12878	blood:	n/a	chr19:36266441-36266457 chr19:36266433-36266449
24	BRCA1	chr19:36248662-36249630	Hela-S3	cervix:	n/a	chr19:36248709-36248716
25	BRCA1	chr19:36248770-36249572	GM12878	blood:	n/a	n/a
26	BRCA1	chr19:36248910-36249464	HepG2	liver:	n/a	n/a
27	CBX3	chr19:36248310-36249325	K562	blood:	n/a	n/a
28	CBX3	chr19:36288575-36288913	K562	blood:	n/a	n/a
29	CCNT2	chr19:36246434-36246740	K562	blood:	n/a	n/a
30	CCNT2	chr19:36247726-36247920	K562	blood:	n/a	n/a
31	CCNT2	chr19:36248344-36248590	K562	blood:	n/a	n/a
32	CCNT2	chr19:36248868-36249303	K562	blood:	n/a	chr19:36249018-36249027
33	CCNT2	chr19:36288689-36288732	K562	blood:	n/a	n/a
34	CCNT2	chr19:36266181-36266608	K562	blood:	n/a	chr19:36266430-36266439
35	CEBPB	chr19:36265487-36265786	K562	blood:	n/a	n/a
36	CEBPB	chr19:36262588-36262772	K562	blood:	n/a	n/a
37	CEBPB	chr19:36251827-36252062	A549	lung:	n/a	n/a
38	CEBPB	chr19:36265311-36265940	A549	lung:	n/a	n/a
39	CEBPB	chr19:36265446-36265818	A549	lung:	n/a	n/a
40	CEBPB	chr19:36251797-36251963	HepG2	liver:	n/a	n/a
41	CEBPB	chr19:36248385-36249571	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr19:36248441-36249465	A549	lung:	n/a	n/a
43	CEBPB	chr19:36248411-36248743	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr19:36266334-36266501	HepG2	liver:	n/a	chr19:36266353-36266361
45	CEBPB	chr19:36249244-36249556	K562	blood:	n/a	n/a
46	CEBPB	chr19:36248416-36248949	K562	blood:	n/a	n/a
47	CEBPB	chr19:36266467-36266526	K562	blood:	n/a	n/a
48	CEBPB	chr19:36248457-36248654	HepG2	liver:	n/a	n/a
49	CEBPB	chr19:36265490-36265798	HepG2	liver:	n/a	n/a
50	CEBPB	chr19:36249106-36249562	HepG2	liver:	n/a	n/a

(count:2623 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:36243162-36243212	HUVEC	blood vessel:	n/a
2	chr19:36248852-36248902	GM19239	blood:	n/a
3	chr19:36249454-36249504	SAEC	small airway:	n/a
4	chr19:36269387-36269437	HMEC	breast:	n/a
5	chr19:36266369-36266419	HCPEpiC	choroid plexus:	n/a
6	chr19:36247867-36247917	HAEpiC	amniotic membrane:	n/a
7	chr19:36249201-36249251	SK-N-MC	brain:	n/a
8	chr19:36247869-36247919	Hela-S3	cervix:	n/a
9	chr19:36246395-36246445	HRCEpiC	kidney:	n/a
10	chr19:36288702-36288752	HIPEpiC	eye:	n/a
11	chr19:36246408-36246458	HCF	heart:	n/a
12	chr19:36249933-36249983	T-47D	breast:	n/a
13	chr19:36266554-36266604	HEEpiC	esophagus:	n/a
14	chr19:36247867-36247917	CMK	blood:	n/a
15	chr19:36248877-36248927	SK-N-SH_RA	brain:	n/a
16	chr19:36266840-36266890	H1-hESC	embryonic stem cell:	embryo
17	chr19:36279422-36279472	SK-N-SH_RA	brain:	n/a
18	chr19:36247523-36247573	SK-N-SH	brain:	n/a
19	chr19:36247526-36247576	AoSMC	blood vessel:	n/a
20	chr19:36246408-36246458	GM19239	blood:	n/a
21	chr19:36246395-36246445	NHDF-neo	bronchial:	n/a
22	chr19:36243162-36243212	HMEC	breast:	n/a
23	chr19:36246882-36246932	PrEC	prostate:	n/a
24	chr19:36266374-36266424	PrEC	prostate:	n/a
25	chr19:36253202-36253252	HL-60	blood:	n/a
26	chr19:36266372-36266422	SK-N-MC	brain:	n/a
27	chr19:36266840-36266890	HCT-116	colon:	n/a
28	chr19:36247526-36247576	Caco-2	colon:	n/a
29	chr19:36266317-36266367	PFSK-1	brain:	n/a
30	chr19:36248020-36248070	HPAEpiC	pulmonary alveolar:	n/a
31	chr19:36266369-36266419	GM06990	blood:	n/a
32	chr19:36249201-36249251	NHBE	bronchial:	n/a
33	chr19:36246395-36246445	MCF10A-Er-Src	breast:	n/a
34	chr19:36279422-36279472	Hepatocyte	liver:	n/a
35	chr19:36246408-36246458	HUVEC	blood vessel:	n/a
36	chr19:36246408-36246458	HCM	heart:	n/a
37	chr19:36247523-36247573	HIPEpiC	eye:	n/a
38	chr19:36247526-36247576	GM12892	blood:	n/a
39	chr19:36266369-36266419	GM12878	blood:	n/a
40	chr19:36248980-36249030	HEK293	kidney:	embryo
41	chr19:36269387-36269437	ECC-1	luminal epithelium:	n/a
42	chr19:36247526-36247576	HCPEpiC	choroid plexus:	n/a
43	chr19:36248739-36248789	HL-60	blood:	n/a
44	chr19:36248996-36249046	Hepatocyte	liver:	n/a
45	chr19:36248739-36248789	U87	brain:	n/a
46	chr19:36288702-36288752	HEEpiC	esophagus:	n/a
47	chr19:36248877-36248927	AG04449	skin:	fetal
48	chr19:36266317-36266367	GM12878	blood:	n/a
49	chr19:36266317-36266367	Caco-2	colon:	n/a
50	chr19:36266317-36266367	SK-N-SH_RA	brain:	n/a

(count:83 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr19:36207946..36209485-chr19:36241921..36244354,2	MCF-7	breast:
2	chr19:36273554..36275666-chr19:36279715..36282125,2	MCF-7	breast:
3	chr19:36258097..36260654-chr19:36262475..36265649,5	MCF-7	breast:
4	chr19:36248580..36254743-chr19:36274692..36280659,6	K562	blood:
5	chr19:36248761..36250845-chr19:36272724..36275459,2	MCF-7	breast:
6	chr19:36261311..36264277-chr19:36264706..36266602,2	MCF-7	breast:
7	chr19:36234786..36236387-chr19:36265803..36268215,2	MCF-7	breast:
8	chr19:36248961..36249527-chr5:126112471..126112982,2	Hela-S3	cervix:
9	chr19:36272002..36276478-chr19:36278525..36283309,6	K562	blood:
10	chr19:36249010..36249702-chr19:49121978..49122478,2	Hela-S3	cervix:
11	chr19:36257583..36262889-chr19:36280442..36283468,4	MCF-7	breast:
12	chr11:64037188..64037741-chr19:36248285..36249182,2	NB4	blood:
13	chr19:36249097..36250751-chr19:36253279..36257027,3	K562	blood:
14	chr19:36267110..36269446-chr19:36272334..36274173,2	K562	blood:
15	chr19:36261311..36264277-chr19:36264706..36266602,2	MCF-7	breast:
16	chr19:36247404..36252021-chr19:36265348..36272678,7	MCF-7	breast:
17	chr19:36273554..36275666-chr19:36279715..36282125,2	MCF-7	breast:
18	chr19:36239474..36241411-chr19:36265453..36267969,2	K562	blood:
19	chr19:35738434..35740432-chr19:36265157..36268131,2	MCF-7	breast:
20	chr19:36238866..36244880-chr19:36246037..36252437,21	MCF-7	breast:
21	chr19:36207151..36210695-chr19:36264649..36268718,5	K562	blood:
22	chr19:36247404..36252021-chr19:36265348..36272678,7	MCF-7	breast:
23	chr19:36288840..36290820-chr19:36294130..36297003,2	K562	blood:
24	chr19:36206099..36210841-chr19:36246614..36251827,8	MCF-7	breast:
25	chr19:36277506..36280414-chr19:36281962..36284399,2	MCF-7	breast:
26	chr19:36207787..36211113-chr19:36265053..36268029,3	K562	blood:
27	chr19:36278394..36281152-chr19:36283077..36286446,4	K562	blood:
28	chr19:36239415..36241356-chr19:36242820..36244877,2	MCF-7	breast:
29	chr15:45878796..45879581-chr19:36248850..36249484,2	Hela-S3	cervix:
30	chr19:36256506..36259052-chr19:36262546..36265793,4	K562	blood:
31	chr19:36247959..36249985-chr19:36390079..36391606,2	MCF-7	breast:
32	chr19:36239350..36241235-chr19:36263074..36266129,3	MCF-7	breast:
33	chr19:36207379..36214815-chr19:36234227..36241330,25	MCF-7	breast:
34	chr19:36239375..36241509-chr19:36425781..36428099,2	MCF-7	breast:
35	chr19:36255893..36262036-chr19:36262850..36268803,8	MCF-7	breast:
36	chr19:36239350..36241235-chr19:36263074..36266129,3	MCF-7	breast:
37	chr19:36266545..36269722-chr19:36286322..36289805,3	K562	blood:
38	chr19:36251835..36255945-chr19:36256071..36258525,4	K562	blood:
39	chr19:36247584..36253409-chr19:36264102..36268750,7	K562	blood:
40	chr19:36234932..36236574-chr19:36258515..36260489,2	K562	blood:
41	chr19:36272079..36274147-chr19:36275099..36277481,2	MCF-7	breast:
42	chr19:36258097..36260654-chr19:36262475..36265649,5	MCF-7	breast:
43	chr19:36267110..36269446-chr19:36272334..36274173,2	K562	blood:
44	chr19:36248580..36254743-chr19:36274692..36280659,6	K562	blood:
45	chr19:36239474..36241411-chr19:36265453..36267969,2	K562	blood:
46	chr19:36266549..36268656-chr19:36368007..36369573,2	K562	blood:
47	chr19:36278394..36281152-chr19:36283077..36286446,4	K562	blood:
48	chr19:36262058..36264352-chr19:36264633..36266290,2	MCF-7	breast:
49	chr19:36249097..36250751-chr19:36253279..36257027,3	K562	blood:
50	chr19:36242461..36245033-chr19:36262811..36266302,4	K562	blood:

(count:34 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRODH2-1	chr19:36281919-36282754	NR_104176
2	lnc-PRODH2-3	chr19:36279466-36279676	uc_450_-
3	lnc-PRODH2-1	chr19:36288702-36288787	ENSG00000225872
4	lnc-C19orf55-4	chr19:36279466-36279676	uc_450_+
5	lnc-HSPB6-3	chr19:36260046-36260194	ENSG00000267049.1
6	lnc-PRODH2-1	chr19:36288702-36288811	NR_104176
7	lnc-HSPB6-2	chr19:36245427-36246208	NONHSAT065911
8	lnc-PRODH2-1	chr19:36283290-36283344	ENSG00000225872.2
9	lnc-PRODH2-1	chr19:36279778-36279976	NR_104176
10	lnc-PRODH2-1	chr19:36281919-36282754	ENSG00000225872
11	lnc-PRODH2-1	chr19:36280073-36280122	NR_104176
12	lnc-HSPB6-1	chr19:36242862-36244316	ENSG00000247203
13	lnc-PRODH2-1	chr19:36288702-36288740	ENSG00000225872.2
14	lnc-PRODH2-1	chr19:36280073-36280122	ENSG00000225872
15	lnc-PRODH2-1	chr19:36282005-36282754	ENSG00000225872.2
16	lnc-C19orf55-1	chr19:36261714-36261930	NONHSAT065915
17	lnc-PRODH2-1	chr19:36280309-36280830	ENSG00000225872
18	lnc-PRODH2-1	chr19:36280920-36281007	ENSG00000225872
19	lnc-PRODH2-1	chr19:36281489-36281719	NR_104176
20	lnc-LIN37-3	chr19:36246038-36246391	ENSG00000267328.1
21	lnc-PRODH2-1	chr19:36280920-36281007	NR_104176
22	lnc-C19orf55-1	chr19:36259312-36259471	NONHSAT065916
23	lnc-PRODH2-1	chr19:36283190-36283344	ENSG00000225872
24	lnc-HSPB6-1	chr19:36242862-36244316	ENSG00000267439.1
25	lnc-HSPB6-3	chr19:36261653-36261930	ENSG00000267049.1
26	lnc-C19orf55-1	chr19:36259667-36260237	NONHSAT065916
27	lnc-PRODH2-1	chr19:36281489-36281719	ENSG00000225872
28	lnc-C19orf55-1	chr19:36259104-36259471	NONHSAT065915
29	lnc-PRODH2-1	chr19:36280309-36280830	NR_104176
30	lnc-PRODH2-1	chr19:36283190-36283344	NR_104176
31	lnc-PRODH2-1	chr19:36279778-36279976	ENSG00000225872
32	lnc-LIN37-3	chr19:36245467-36245772	ENSG00000267328.1
33	lnc-LIN37-2	chr19:36242952-36243073	NONHSAT065909
34	lnc-C19orf55-1	chr19:36259667-36260155	NONHSAT065915

No data

Variant related genes	Relation type
HSPB6	TF binding region
ENSG00000267049	TF binding region
ENSG00000225872	TF binding region
U2AF1L4	TF binding region
ENSG00000267120	TF binding region
C19orf55	TF binding region
ENSG00000267328	TF binding region
ENSG00000267439	TF binding region
LIN37	TF binding region
ARHGAP33	TF binding region
HSPB6	CpG island
ENSG00000267049	CpG island
ENSG00000225872	CpG island
U2AF1L4	CpG island
ENSG00000267120	CpG island
C19orf55	CpG island
ENSG00000267328	CpG island
ENSG00000267439	CpG island
LIN37	CpG island
ARHGAP33	CpG island
ENSG00000267439	chromatin interactions
ENSG00000267120	chromatin interactions
ENSG00000004776	chromatin interactions
ENSG00000063177	chromatin interactions
ENSG00000126243	chromatin interactions
ENSG00000267049	chromatin interactions
ENSG00000113368	chromatin interactions
ENSG00000272333	chromatin interactions
ENSG00000167604	chromatin interactions
ENSG00000105699	chromatin interactions
ENSG00000167595	chromatin interactions
ENSG00000260170	chromatin interactions
ENSG00000267796	chromatin interactions
ENSG00000267626	chromatin interactions
ENSG00000104164	chromatin interactions
ENSG00000267328	chromatin interactions
ENSG00000161265	chromatin interactions
ENSG00000105290	chromatin interactions
ENSG00000250799	chromatin interactions
ENSG00000105663	chromatin interactions
ENSG00000004777	chromatin interactions
ENSG00000249115	chromatin interactions
ENSG00000205155	chromatin interactions
ENSG00000173264	chromatin interactions
ENSG00000126246	chromatin interactions
ENSG00000225872	chromatin interactions
LOXL2	miRNA target sites
BACE1	miRNA target sites
NCOA3	miRNA target sites
CTCF	miRNA target sites
DLG5	miRNA target sites
C3orf19	miRNA target sites
LARP1B	miRNA target sites
CRLF3	miRNA target sites

Extended variants
information (count: 2103 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:2103 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs173003	chr19:36240960-36240961	Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS	Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs372048088	chr19:36240985-36240986	Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
3	rs11667696	chr19:36241056-36241057	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs547222608	chr19:36241072-36241073	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
5	rs570524601	chr19:36241081-36241082	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
6	rs185469661	chr19:36241083-36241084	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
7	rs73592416	chr19:36241124-36241125	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs541444767	chr19:36241157-36241158	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
9	rs144370505	chr19:36241163-36241164	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
10	rs189639042	chr19:36241217-36241218	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
11	rs372152990	chr19:36241330-36241331	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
12	rs533270334	chr19:36241352-36241353	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
13	rs542347211	chr19:36241429-36241430	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs551437501	chr19:36241475-36241476	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs115938070	chr19:36241489-36241490	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs531159707	chr19:36241522-36241523	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs552562254	chr19:36241529-36241530	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs539491340	chr19:36241558-36241559	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs531936500	chr19:36241592-36241593	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs11463543	chr19:36241610-36241611	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs397693094	chr19:36241611-36241612	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs397715224	chr19:36241612-36241613	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs546986760	chr19:36241622-36241623	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs565378421	chr19:36241623-36241624	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs537088906	chr19:36241638-36241639	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs111677082	chr19:36241659-36241660	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs140186262	chr19:36241673-36241674	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs549632270	chr19:36241688-36241689	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs569723359	chr19:36241703-36241704	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs537265725	chr19:36241724-36241725	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs180822917	chr19:36241732-36241733	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs143538823	chr19:36241733-36241734	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs541381553	chr19:36241802-36241803	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs553391430	chr19:36241804-36241805	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs567901421	chr19:36241810-36241811	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs574918267	chr19:36241867-36241868	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs146801102	chr19:36241886-36241887	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs535198167	chr19:36241932-36241933	Weak transcription Enhancers Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs563822940	chr19:36241939-36241940	Weak transcription Enhancers Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs553329090	chr19:36241950-36241951	Weak transcription Enhancers Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs369234779	chr19:36241963-36241964	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs546383449	chr19:36242037-36242038	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs369246730	chr19:36242055-36242056	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs371752588	chr19:36242059-36242060	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs376561002	chr19:36242060-36242061	Weak transcription Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs553627497	chr19:36242083-36242084	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs528752002	chr19:36242129-36242130	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs546923397	chr19:36242155-36242156	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs558901562	chr19:36242188-36242189	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs572124888	chr19:36242234-36242235	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Ovarian cancer	21397856	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Ovarian cancer	20844748	CNVD
Non-small cell lung cancer	21829676	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cancer	21183584	CNVD
Honadal dysgenesis	21048976	CNVD
Neurodevelopmental disorder	22521361	CNVD
Endometrial cancer	23636398	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Gastric cancer	21811585	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Lung cancer	21569311	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:2875 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:36239200-36241000	Active TSS	HSMMtube	muscle
2	chr19:36239800-36241000	Enhancers	Fetal Heart	heart
3	chr19:36240000-36241000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
4	chr19:36240000-36241000	Flanking Active TSS	Stomach Smooth Muscle	stomach
5	chr19:36240000-36241400	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr19:36240000-36241400	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr19:36240000-36246200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr19:36240200-36241000	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr19:36240200-36241000	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr19:36240200-36241000	Enhancers	Primary B cells from peripheral blood	blood
11	chr19:36240200-36241000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
12	chr19:36240200-36241000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
13	chr19:36240200-36241000	Enhancers	Fetal Intestine Large	intestine
14	chr19:36240200-36241000	Enhancers	Fetal Stomach	stomach
15	chr19:36240200-36241000	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr19:36240200-36241200	Enhancers	Pancreas	Pancrea
17	chr19:36240200-36241400	Enhancers	Liver	Liver
18	chr19:36240200-36241400	Enhancers	Esophagus	oesophagus
19	chr19:36240200-36241600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr19:36240200-36242000	Enhancers	Primary T cells fromperipheralblood	blood
21	chr19:36240200-36242800	Weak transcription	Aorta	Aorta
22	chr19:36240200-36243400	Weak transcription	HUES48 Cell Line	embryonic stem cell
23	chr19:36240200-36243800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr19:36240200-36244600	Weak transcription	H9 Cell Line	embryonic stem cell
25	chr19:36240200-36246200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr19:36240400-36241000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr19:36240400-36241000	Enhancers	Primary B cells from cord blood	blood
28	chr19:36240400-36241000	Enhancers	Primary hematopoietic stem cells short term culture	blood
29	chr19:36240400-36241000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
30	chr19:36240400-36241000	Enhancers	Primary T helper cells fromperipheralblood	blood
31	chr19:36240400-36241000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
32	chr19:36240400-36241000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr19:36240400-36241000	Enhancers	Brain Hippocampus Middle	brain
34	chr19:36240400-36241000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
35	chr19:36240400-36241000	Enhancers	Rectal Mucosa Donor 31	rectum
36	chr19:36240400-36241000	Enhancers	Right Ventricle	heart
37	chr19:36240400-36241000	Enhancers	A549	lung
38	chr19:36240400-36241000	Enhancers	HMEC	breast
39	chr19:36240400-36241000	Enhancers	HUVEC	blood vessel
40	chr19:36240400-36241000	Enhancers	K562	blood
41	chr19:36240400-36241000	Enhancers	Monocytes-CD14+_RO01746	blood
42	chr19:36240400-36241000	Enhancers	Osteobl	bone
43	chr19:36240400-36241200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr19:36240400-36241200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr19:36240400-36241200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr19:36240400-36241200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
47	chr19:36240400-36241200	Enhancers	Primary T helper cells PMA-I stimulated	--
48	chr19:36240400-36241200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
49	chr19:36240400-36241200	Enhancers	Primary T killer memory cells from peripheral blood	blood
50	chr19:36240400-36241200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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