Variant report

Variant	nsv912299
Chromosome Location	chr19:52795985-52832830
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:650)
CpG islands
(count:856)
Chromatin interactive
region (count:40)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:650 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:52826601-52826666	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:52800057-52800292	HepG2	liver:	n/a	n/a
3	BACH1	chr19:52800399-52800809	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr19:52800724-52800735	K562	blood:	n/a	n/a
5	BCL3	chr19:52800355-52800805	A549	lung:	n/a	chr19:52800653-52800666 chr19:52800410-52800423 chr19:52800406-52800415
6	BHLHE40	chr19:52800388-52801111	K562	blood:	n/a	n/a
7	BHLHE40	chr19:52800103-52800749	HepG2	liver:	n/a	n/a
8	BHLHE40	chr19:52800028-52800858	GM12878	blood:	n/a	n/a
9	BRCA1	chr19:52800571-52800744	HepG2	liver:	n/a	n/a
10	CBX3	chr19:52810510-52810916	HCT-116	colon:	n/a	n/a
11	CBX3	chr19:52827033-52827512	K562	blood:	n/a	n/a
12	CBX3	chr19:52810427-52810886	K562	blood:	n/a	n/a
13	CBX3	chr19:52800594-52801006	K562	blood:	n/a	n/a
14	CBX3	chr19:52810515-52810938	K562	blood:	n/a	n/a
15	CBX3	chr19:52825626-52826201	K562	blood:	n/a	n/a
16	CBX3	chr19:52826471-52826959	K562	blood:	n/a	n/a
17	CCNT2	chr19:52831277-52831477	K562	blood:	n/a	n/a
18	CCNT2	chr19:52800052-52800895	K562	blood:	n/a	n/a
19	CEBPB	chr19:52797915-52798211	HepG2	liver:	n/a	chr19:52798084-52798093 chr19:52798084-52798095 chr19:52798084-52798093 chr19:52798084-52798093 chr19:52798082-52798095 chr19:52798082-52798093 chr19:52798082-52798095 chr19:52798084-52798093
20	CEBPB	chr19:52797955-52798175	A549	lung:	n/a	chr19:52798084-52798093 chr19:52798084-52798095 chr19:52798084-52798093 chr19:52798084-52798093 chr19:52798082-52798095 chr19:52798082-52798093 chr19:52798082-52798095 chr19:52798084-52798093
21	CEBPB	chr19:52823946-52824100	A549	lung:	n/a	n/a
22	CEBPD	chr19:52800352-52801134	K562	blood:	n/a	n/a
23	CEBPD	chr19:52800335-52800632	HepG2	liver:	n/a	n/a
24	CEBPD	chr19:52831329-52831541	K562	blood:	n/a	n/a
25	CHD1	chr19:52800475-52800811	GM12878	blood:	n/a	n/a
26	CHD2	chr19:52800020-52800824	GM12878	blood:	n/a	n/a
27	CHD2	chr19:52800521-52800870	K562	blood:	n/a	n/a
28	CHD2	chr19:52800071-52801083	HepG2	liver:	n/a	n/a
29	CREB1	chr19:52800370-52800988	A549	lung:	n/a	n/a
30	CTCF	chr19:52800620-52800770	GM12865	blood:	n/a	n/a
31	CTCF	chr19:52800720-52800870	GM12872	blood:	n/a	n/a
32	CTCF	chr19:52800660-52800810	SK-N-SH_RA	brain:	n/a	n/a
33	CTCF	chr19:52800720-52800870	NHDF-neo	bronchial:	n/a	n/a
34	CTCF	chr19:52800720-52800870	GM12874	blood:	n/a	n/a
35	CTCF	chr19:52800680-52800830	HRPEpiC	eye:	n/a	n/a
36	CTCF	chr19:52800780-52800930	GM12873	blood:	n/a	n/a
37	CTCF	chr19:52800620-52800770	GM12866	blood:	n/a	n/a
38	CTCF	chr19:52800720-52800870	BJ	skin:	n/a	n/a
39	CTCF	chr19:52800720-52800870	HCPEpiC	choroid plexus:	n/a	n/a
40	CTCF	chr19:52800620-52800770	NHDF-neo	bronchial:	n/a	n/a
41	CTCF	chr19:52800695-52800770	Pancreas_OC	pancreas:	n/a	n/a
42	CTCF	chr19:52800700-52800850	GM12871	blood:	n/a	n/a
43	CTCF	chr19:52800680-52800830	Caco-2	colon:	n/a	n/a
44	CTCF	chr19:52800740-52800890	HVMF	connective:	n/a	n/a
45	CTCF	chr19:52800740-52800890	HMF	breast:	n/a	n/a
46	CTCF	chr19:52800720-52800870	HBMEC	blood vessel:	n/a	n/a
47	CTCF	chr19:52800660-52800810	RPTEC	kidney:	n/a	n/a
48	CTCF	chr19:52800480-52800630	GM12872	blood:	n/a	n/a
49	CTCF	chr19:52800660-52800810	AG09319	gingival:	n/a	n/a
50	CTCF	chr19:52800660-52800810	HBMEC	blood vessel:	n/a	n/a

(count:856 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:52803786-52803836	T-47D	breast:	n/a
2	chr19:52803786-52803836	ProgFib	skin:	n/a
3	chr19:52803786-52803836	T-47D	breast:	n/a
4	chr19:52803786-52803836	ProgFib	skin:	n/a
5	chr19:52800241-52800291	LNCaP	prostate:	n/a
6	chr19:52800391-52800441	HEK293	kidney:	embryo
7	chr19:52796719-52796769	HCF	heart:	n/a
8	chr19:52801051-52801101	AG04450	lung:	fetal
9	chr19:52800241-52800291	AG04450	lung:	fetal
10	chr19:52800241-52800291	SK-N-SH_RA	brain:	n/a
11	chr19:52800709-52800759	SK-N-SH	brain:	n/a
12	chr19:52800757-52800807	HUVEC	blood vessel:	n/a
13	chr19:52800385-52800435	MCF-7	breast:	n/a
14	chr19:52801097-52801147	SK-N-SH_RA	brain:	n/a
15	chr19:52803786-52803836	PANC-1	pancreas:	n/a
16	chr19:52801051-52801101	NT2-D1	testis:	n/a
17	chr19:52800115-52800165	AoSMC	blood vessel:	n/a
18	chr19:52800757-52800807	HIPEpiC	eye:	n/a
19	chr19:52800524-52800574	ProgFib	skin:	n/a
20	chr19:52800469-52800519	IMR90	lung:	fetal
21	chr19:52800757-52800807	RPTEC	kidney:	n/a
22	chr19:52800391-52800441	ProgFib	skin:	n/a
23	chr19:52800273-52800323	ovcar-3	ovarian:	n/a
24	chr19:52800391-52800441	CMK	blood:	n/a
25	chr19:52800385-52800435	SK-N-MC	brain:	n/a
26	chr19:52800391-52800441	GM12878	blood:	n/a
27	chr19:52800757-52800807	SK-N-MC	brain:	n/a
28	chr19:52796719-52796769	MCF-7	breast:	n/a
29	chr19:52801051-52801101	AG10803	skin:	n/a
30	chr19:52800241-52800291	HIPEpiC	eye:	n/a
31	chr19:52800241-52800291	MCF10A-Er-Src	breast:	n/a
32	chr19:52803786-52803836	H1-hESC	embryonic stem cell:	embryo
33	chr19:52800757-52800807	HAEpiC	amniotic membrane:	n/a
34	chr19:52800709-52800759	K562	blood:	n/a
35	chr19:52800111-52800161	AoSMC	blood vessel:	n/a
36	chr19:52801097-52801147	HEEpiC	esophagus:	n/a
37	chr19:52800241-52800291	GM06990	blood:	n/a
38	chr19:52801097-52801147	AG09309	skin:	n/a
39	chr19:52801097-52801147	NT2-D1	testis:	n/a
40	chr19:52800273-52800323	T-47D	breast:	n/a
41	chr19:52800111-52800161	GM12878	blood:	n/a
42	chr19:52800111-52800161	HEK293	kidney:	embryo
43	chr19:52796719-52796769	PANC-1	pancreas:	n/a
44	chr19:52800757-52800807	MCF-7	breast:	n/a
45	chr19:52800469-52800519	BJ	skin:	n/a
46	chr19:52800273-52800323	HCM	heart:	n/a
47	chr19:52800111-52800161	NHBE	bronchial:	n/a
48	chr19:52796719-52796769	SAEC	small airway:	n/a
49	chr19:52800709-52800759	GM19239	blood:	n/a
50	chr19:52800273-52800323	K562	blood:	n/a

(count:40 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:52796840..52799102-chr19:52799281..52802862,3	MCF-7	breast:
2	chr19:52829044..52832005-chr19:52837936..52840365,2	MCF-7	breast:
3	chr19:52771765..52773919-chr19:52819713..52821858,2	MCF-7	breast:
4	chr19:52799399..52802130-chr19:52819718..52821732,2	K562	blood:
5	chr19:52810214..52812761-chr19:52813239..52815974,2	K562	blood:
6	chr19:52800699..52803892-chr19:52837325..52840976,3	MCF-7	breast:
7	chr19:52799793..52802447-chr19:52803288..52807131,4	MCF-7	breast:
8	chr19:52829210..52832192-chr19:52833686..52836622,2	K562	blood:
9	chr19:52820318..52821847-chr19:52825066..52827938,2	K562	blood:
10	chr19:52772363..52775107-chr19:52799601..52802037,4	MCF-7	breast:
11	chr19:52799531..52802059-chr19:52803187..52805101,2	K562	blood:
12	chr19:52772712..52774263-chr19:52799047..52800693,2	K562	blood:
13	chr19:52792263..52794621-chr19:52796149..52799005,2	K562	blood:
14	chr19:52771242..52774496-chr19:52796154..52801198,5	MCF-7	breast:
15	chr19:52771868..52774315-chr19:52811814..52814643,2	K562	blood:
16	chr19:52780362..52782762-chr19:52795310..52797361,2	K562	blood:
17	chr19:52800534..52802484-chr19:52807746..52810070,2	MCF-7	breast:
18	chr1:147400307..147400981-chr19:52800137..52800809,2	MCF-7	breast:
19	chr19:52804812..52807578-chr19:52808701..52812079,3	MCF-7	breast:
20	chr19:52823009..52826195-chr19:52826633..52829397,3	K562	blood:
21	chr19:52805604..52808306-chr19:52809399..52811799,3	K562	blood:
22	chr19:52822040..52824431-chr19:52826518..52828994,2	K562	blood:
23	chr19:52823009..52826195-chr19:52826633..52829397,3	K562	blood:
24	chr19:52804339..52806000-chr19:52838454..52840879,2	MCF-7	breast:
25	chr19:52798639..52802182-chr19:52825182..52828059,3	K562	blood:
26	chr19:52799793..52802447-chr19:52803288..52807131,4	MCF-7	breast:
27	chr19:52771362..52774263-chr19:52797982..52800693,2	K562	blood:
28	chr19:52800603..52802220-chr19:52805113..52807077,2	K562	blood:
29	chr19:52776723..52778376-chr19:52800239..52801922,2	K562	blood:
30	chr19:52799239..52802011-chr19:52817590..52819233,2	MCF-7	breast:
31	chr19:52810214..52812761-chr19:52813239..52815974,2	K562	blood:
32	chr19:52804812..52807578-chr19:52808701..52812079,3	MCF-7	breast:
33	chr19:52798701..52802396-chr19:52818537..52821732,4	K562	blood:
34	chr19:52827319..52831915-chr19:52837582..52840953,5	MCF-7	breast:
35	chr19:52828291..52831274-chr19:52840252..52843029,2	K562	blood:
36	chr19:52820318..52821847-chr19:52825066..52827938,2	K562	blood:
37	chr19:52805604..52808306-chr19:52809399..52811799,3	K562	blood:
38	chr19:52822040..52824431-chr19:52826518..52828994,2	K562	blood:
39	chr19:52799531..52802059-chr19:52803187..52805101,2	K562	blood:
40	chr19:52771095..52772682-chr19:52804842..52807560,2	K562	blood:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF836-4	chr19:52811920-52812006	ENSG00000269535.1
2	lnc-ZNF836-3	chr19:52801024-52801173	ENSG00000269102.1
3	lnc-ZNF836-4	chr19:52805234-52805383	ENSG00000269535.1
4	lnc-ZNF836-4	chr19:52803946-52805128	ENSG00000269535.1
5	lnc-ZNF836-4	chr19:52829077-52829148	ENSG00000269535.1
6	lnc-ZNF836-4	chr19:52810645-52810797	ENSG00000269535.1

No data

Variant related genes	Relation type
ZNF480	TF binding region
ENSG00000269102	TF binding region
ZNF480	CpG island
ENSG00000269102	CpG island
ENSG00000167554	chromatin interactions
ENSG00000188092	chromatin interactions
ENSG00000269102	chromatin interactions
ENSG00000198464	chromatin interactions
ENSG00000196214	chromatin interactions

Extended variants
information (count: 1475 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:1475 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10414779	chr19:52795985-52795986	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs553719278	chr19:52795994-52795995	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs572118655	chr19:52795997-52795998	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs142560869	chr19:52796016-52796017	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs185537285	chr19:52796038-52796039	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs577041972	chr19:52796043-52796044	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs10413233	chr19:52796044-52796045	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs189898105	chr19:52796113-52796114	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs561760883	chr19:52796115-52796116	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs530194179	chr19:52796232-52796233	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs574429609	chr19:52796253-52796254	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs114649933	chr19:52796259-52796260	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs150550446	chr19:52796260-52796261	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs182156228	chr19:52796289-52796290	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs10414422	chr19:52796323-52796324	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs570833906	chr19:52796366-52796367	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs138815886	chr19:52796371-52796372	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs138927493	chr19:52796403-52796404	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs374471727	chr19:52796422-52796423	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs62110445	chr19:52796424-52796425	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs71180433	chr19:52796444-52796445	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs79561503	chr19:52796445-52796446	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs200580711	chr19:52796464-52796465	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs77208830	chr19:52796467-52796468	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs527735590	chr19:52796520-52796521	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs535533878	chr19:52796566-52796567	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs186719553	chr19:52796587-52796588	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs547180157	chr19:52796593-52796594	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs113614116	chr19:52796603-52796604	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs193138159	chr19:52796641-52796642	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs35659666	chr19:52796675-52796676	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs80178730	chr19:52796676-52796677	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs568397163	chr19:52796680-52796681	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs536979825	chr19:52796687-52796688	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs376054340	chr19:52796716-52796717	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs111658212	chr19:52796719-52796720	Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs573797500	chr19:52796751-52796752	Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs368600670	chr19:52796752-52796753	Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs547324692	chr19:52796791-52796792	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs144691524	chr19:52796795-52796796	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs577391308	chr19:52796853-52796854	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs200422542	chr19:52796858-52796859	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs143895258	chr19:52796874-52796875	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs112083187	chr19:52796877-52796878	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs78558082	chr19:52796879-52796880	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs375750725	chr19:52796881-52796882	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs28412317	chr19:52796935-52796936	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs545772541	chr19:52796947-52796948	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs577004705	chr19:52796955-52796956	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs564176350	chr19:52796965-52796966	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Adrenocortical carcinoma	18281524	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD

Chromatin state (count:1446 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:52774200-52797400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr19:52774200-52799600	Weak transcription	Hela-S3	cervix
3	chr19:52780400-52800000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr19:52784600-52796000	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr19:52784600-52796400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr19:52784600-52796800	ZNF genes & repeats	Liver	Liver
7	chr19:52785000-52796000	Strong transcription	HUES64 Cell Line	embryonic stem cell
8	chr19:52785200-52796000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr19:52785200-52796400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr19:52785400-52796000	Strong transcription	H1 Cell Line	embryonic stem cell
11	chr19:52785400-52796000	Strong transcription	Cortex derived primary cultured neurospheres	brain
12	chr19:52785400-52796400	Strong transcription	Adipose Nuclei	Adipose
13	chr19:52785400-52797400	Strong transcription	Brain Germinal Matrix	brain
14	chr19:52786000-52796000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
15	chr19:52787000-52797000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr19:52788000-52796200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr19:52788400-52799800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr19:52788800-52800000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr19:52789200-52799400	Weak transcription	Pancreas	Pancrea
20	chr19:52790800-52796400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr19:52791800-52799600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr19:52792200-52800400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
23	chr19:52792600-52796000	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
24	chr19:52792600-52797800	ZNF genes & repeats	A549	lung
25	chr19:52793200-52796000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr19:52793400-52796000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr19:52794000-52796000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr19:52794000-52796400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr19:52794200-52799400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr19:52794400-52796000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr19:52794400-52796000	Strong transcription	Primary hematopoietic stem cells	blood
32	chr19:52794400-52796200	Weak transcription	Colonic Mucosa	Colon
33	chr19:52794400-52799600	Weak transcription	Colon Smooth Muscle	Colon
34	chr19:52794400-52799600	Weak transcription	Esophagus	oesophagus
35	chr19:52794400-52799600	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr19:52794400-52799600	Weak transcription	Stomach Mucosa	stomach
37	chr19:52794400-52799600	Weak transcription	HMEC	breast
38	chr19:52794400-52799600	Weak transcription	NH-A	brain
39	chr19:52794600-52799400	Weak transcription	Rectal Smooth Muscle	rectum
40	chr19:52794600-52799600	Weak transcription	Primary T cells from cord blood	blood
41	chr19:52794600-52799600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
42	chr19:52794600-52799600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
43	chr19:52794600-52799600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr19:52794600-52799600	Weak transcription	Brain Anterior Caudate	brain
45	chr19:52794600-52799600	Weak transcription	Brain Hippocampus Middle	brain
46	chr19:52794600-52799600	Weak transcription	Brain Substantia Nigra	brain
47	chr19:52794600-52799600	Weak transcription	Fetal Heart	heart
48	chr19:52794600-52799600	Weak transcription	Fetal Kidney	kidney
49	chr19:52794600-52799600	Weak transcription	Skeletal Muscle Female	skeletal muscle
50	chr19:52794600-52799600	Weak transcription	HepG2	liver

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