Variant report

Variant	nsv912300
Chromosome Location	chr19:52832830-52928039
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1065)
CpG islands
(count:3303)
Chromatin interactive
region (count:42)
LncRNA
region (count:47)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1065 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:52900846-52901131	HepG2	liver:	n/a	n/a
2	ATF1	chr19:52852027-52852098	K562	blood:	n/a	n/a
3	ATF1	chr19:52851245-52851421	K562	blood:	n/a	n/a
4	BACH1	chr19:52839357-52840089	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr19:52873031-52873715	H1-hESC	embryonic stem cell:	n/a	n/a
6	BCLAF1	chr19:52900832-52901375	GM12878	blood:	n/a	n/a
7	BHLHE40	chr19:52846961-52846970	GM12878	blood:	n/a	n/a
8	BHLHE40	chr19:52872998-52873673	GM12878	blood:	n/a	chr19:52873453-52873469
9	BHLHE40	chr19:52900942-52901324	GM12878	blood:	n/a	n/a
10	CBX3	chr19:52900945-52901284	K562	blood:	n/a	n/a
11	CBX3	chr19:52846823-52847179	K562	blood:	n/a	n/a
12	CBX3	chr19:52900872-52901266	K562	blood:	n/a	n/a
13	CEBPB	chr19:52900477-52900699	H1-hESC	embryonic stem cell:	n/a	chr19:52900622-52900635 chr19:52900622-52900633
14	CEBPB	chr19:52900506-52900786	HepG2	liver:	n/a	chr19:52900622-52900635 chr19:52900622-52900633
15	CEBPB	chr19:52900001-52900200	HepG2	liver:	n/a	chr19:52900142-52900153
16	CEBPB	chr19:52840199-52840417	H1-hESC	embryonic stem cell:	n/a	n/a
17	CEBPB	chr19:52841319-52841464	A549	lung:	n/a	n/a
18	CEBPB	chr19:52840123-52840557	IMR90	lung:	n/a	n/a
19	CEBPB	chr19:52854850-52855103	H1-hESC	embryonic stem cell:	n/a	n/a
20	CHD1	chr19:52873085-52873535	GM12878	blood:	n/a	n/a
21	CHD1	chr19:52901004-52901064	GM12878	blood:	n/a	n/a
22	CHD1	chr19:52839869-52839873	H1-hESC	embryonic stem cell:	n/a	n/a
23	CHD1	chr19:52900901-52901048	H1-hESC	embryonic stem cell:	n/a	n/a
24	CHD2	chr19:52900605-52900664	GM12878	blood:	n/a	n/a
25	CHD2	chr19:52873042-52873568	GM12878	blood:	n/a	n/a
26	CHD2	chr19:52900929-52901173	HepG2	liver:	n/a	n/a
27	CHD2	chr19:52847017-52847074	GM12878	blood:	n/a	n/a
28	CHD2	chr19:52900941-52901401	GM12878	blood:	n/a	n/a
29	CREB1	chr19:52839220-52839737	HepG2	liver:	n/a	n/a
30	CREB1	chr19:52872963-52873416	GM12878	blood:	n/a	n/a
31	CREB1	chr19:52900793-52901346	HepG2	liver:	n/a	n/a
32	CTCF	chr19:52854908-52854997	A549	lung:	n/a	n/a
33	CTCF	chr19:52872900-52873050	AG10803	skin:	n/a	n/a
34	CTCF	chr19:52872980-52873130	HUVEC	blood vessel:	n/a	n/a
35	CTCF	chr19:52901480-52901630	AG09319	gingival:	n/a	n/a
36	CTCF	chr19:52873040-52873190	HRPEpiC	eye:	n/a	n/a
37	CTCF	chr19:52854860-52855010	GM12873	blood:	n/a	n/a
38	CTCF	chr19:52846835-52847146	Spleen_OC	spleen:	n/a	chr19:52846970-52846988 chr19:52846972-52846993
39	CTCF	chr19:52872940-52873090	BJ	skin:	n/a	n/a
40	CTCF	chr19:52846960-52847110	GM12874	blood:	n/a	chr19:52846970-52846988 chr19:52846972-52846993
41	CTCF	chr19:52894475-52894649	HepG2	liver:	n/a	n/a
42	CTCF	chr19:52872880-52873030	AG04450	lung:	n/a	n/a
43	CTCF	chr19:52846860-52847010	GM12867	blood:	n/a	chr19:52846970-52846988 chr19:52846972-52846993
44	CTCF	chr19:52901440-52901590	GM12866	blood:	n/a	n/a
45	CTCF	chr19:52839381-52839461	Kidney_OC	kidney:	n/a	n/a
46	CTCF	chr19:52901340-52901490	NHEK	skin:	n/a	n/a
47	CTCF	chr19:52854898-52855021	MCF-7	breast:	n/a	n/a
48	CTCF	chr19:52901440-52901590	AoAF	blood vessel:	n/a	n/a
49	CTCF	chr19:52901380-52901530	GM12872	blood:	n/a	n/a
50	CTCF	chr19:52894668-52894670	Medullo	brain:	n/a	n/a

(count:3303 , 50 per page) page: 1 2 3 4 5 6 7 ... 67

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:52839936-52839986	ECC-1	luminal epithelium:	n/a
2	chr19:52839924-52839974	GM19239	blood:	n/a
3	chr19:52900901-52900951	HL-60	blood:	n/a
4	chr19:52873101-52873151	BJ	skin:	n/a
5	chr19:52873101-52873151	AG10803	skin:	n/a
6	chr19:52901271-52901321	AG09319	gingival:	n/a
7	chr19:52877446-52877496	NHBE	bronchial:	n/a
8	chr19:52901431-52901481	AG09309	skin:	n/a
9	chr19:52872916-52872966	AoSMC	blood vessel:	n/a
10	chr19:52839936-52839986	ECC-1	luminal epithelium:	n/a
11	chr19:52839924-52839974	GM19239	blood:	n/a
12	chr19:52900901-52900951	HL-60	blood:	n/a
13	chr19:52873101-52873151	BJ	skin:	n/a
14	chr19:52873101-52873151	AG10803	skin:	n/a
15	chr19:52901271-52901321	AG09319	gingival:	n/a
16	chr19:52877446-52877496	NHBE	bronchial:	n/a
17	chr19:52901431-52901481	AG09309	skin:	n/a
18	chr19:52872916-52872966	AoSMC	blood vessel:	n/a
19	chr19:52839047-52839097	GM06990	blood:	n/a
20	chr19:52873106-52873156	CMK	blood:	n/a
21	chr19:52873173-52873223	SKMC	muscle:	n/a
22	chr19:52839936-52839986	HMEC	breast:	n/a
23	chr19:52840042-52840092	Hela-S3	cervix:	n/a
24	chr19:52873624-52873674	H1-hESC	embryonic stem cell:	embryo
25	chr19:52877446-52877496	NT2-D1	testis:	n/a
26	chr19:52901307-52901357	AG09309	skin:	n/a
27	chr19:52838671-52838721	GM12878	blood:	n/a
28	chr19:52862167-52862217	HUVEC	blood vessel:	n/a
29	chr19:52839405-52839455	AG04449	skin:	fetal
30	chr19:52905427-52905477	PANC-1	pancreas:	n/a
31	chr19:52900988-52901038	AG04450	lung:	fetal
32	chr19:52904218-52904268	AG09309	skin:	n/a
33	chr19:52898170-52898220	AG09309	skin:	n/a
34	chr19:52901307-52901357	GM12878	blood:	n/a
35	chr19:52900974-52901024	GM12891	blood:	n/a
36	chr19:52839738-52839788	ovcar-3	ovarian:	n/a
37	chr19:52848616-52848666	HEEpiC	esophagus:	n/a
38	chr19:52847933-52847983	HCT-116	colon:	n/a
39	chr19:52847943-52847993	PANC-1	pancreas:	n/a
40	chr19:52901431-52901481	GM06990	blood:	n/a
41	chr19:52901431-52901481	HRE	kidney:	n/a
42	chr19:52873101-52873151	PANC-1	pancreas:	n/a
43	chr19:52847933-52847983	NH-A	brain:	n/a
44	chr19:52873426-52873476	MCF-7	breast:	n/a
45	chr19:52873173-52873223	GM12891	blood:	n/a
46	chr19:52839603-52839653	BE2_C	brain:	n/a
47	chr19:52900974-52901024	HRPEpiC	eye:	n/a
48	chr19:52836583-52836633	SKMC	muscle:	n/a
49	chr19:52870301-52870351	HUVEC	blood vessel:	n/a
50	chr19:52839405-52839455	HRPEpiC	eye:	n/a

(count:42 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:52641710..52644473-chr19:52838292..52841252,2	MCF-7	breast:
2	chr19:52894967..52896731-chr19:52899629..52901485,2	K562	blood:
3	chr19:52800699..52803892-chr19:52837325..52840976,3	MCF-7	breast:
4	chr19:52828291..52831274-chr19:52840252..52843029,2	K562	blood:
5	chr19:52771196..52774040-chr19:52836837..52839956,3	MCF-7	breast:
6	chr19:52847805..52849404-chr19:52851147..52853001,2	MCF-7	breast:
7	chr19:52835793..52838110-chr19:52840085..52841943,2	K562	blood:
8	chr19:52918097..52920312-chr19:52920533..52923080,2	MCF-7	breast:
9	chr19:52839220..52840960-chr19:52842927..52847321,5	MCF-7	breast:
10	chr19:52861409..52864151-chr19:52865571..52868442,2	MCF-7	breast:
11	chr19:52903104..52905523-chr19:52907320..52908934,2	K562	blood:
12	chr19:52861409..52864151-chr19:52865571..52868442,2	MCF-7	breast:
13	chr19:52899758..52902696-chr19:52903314..52905986,3	MCF-7	breast:
14	chr19:52918301..52920285-chr19:52922376..52925176,2	K562	blood:
15	chr19:52881938..52883510-chr19:52886057..52888201,2	K562	blood:
16	chr19:52881938..52883510-chr19:52886057..52888201,2	K562	blood:
17	chr19:52839189..52842101-chr19:52900021..52902093,2	MCF-7	breast:
18	chr19:52899758..52902696-chr19:52903314..52905986,3	MCF-7	breast:
19	chr19:52771880..52774244-chr19:52838831..52841718,3	MCF-7	breast:
20	chr19:52834223..52835955-chr19:52837476..52839580,2	MCF-7	breast:
21	chr19:52771349..52773088-chr19:52900874..52902470,2	MCF-7	breast:
22	chr19:52893005..52896642-chr19:52900305..52903556,3	MCF-7	breast:
23	chr19:52908988..52911904-chr19:52916328..52918022,2	K562	blood:
24	chr19:52901728..52903647-chr19:52912630..52914410,2	MCF-7	breast:
25	chr19:52839457..52840970-chr19:52859823..52861892,2	MCF-7	breast:
26	chr19:52918301..52920285-chr19:52922376..52925176,2	K562	blood:
27	chr19:52894785..52896519-chr19:52899562..52901653,2	MCF-7	breast:
28	chr19:52861080..52862902-chr19:52863243..52865852,2	K562	blood:
29	chr19:52839189..52842101-chr19:52900021..52902093,2	MCF-7	breast:
30	chr19:52841087..52844060-chr19:52845758..52847842,2	MCF-7	breast:
31	chr19:52835793..52838110-chr19:52840085..52841943,2	K562	blood:
32	chr19:52918097..52920312-chr19:52920533..52923080,2	MCF-7	breast:
33	chr19:52901728..52903647-chr19:52912630..52914410,2	MCF-7	breast:
34	chr19:52894785..52896519-chr19:52899562..52901653,2	MCF-7	breast:
35	chr19:52771473..52773658-chr19:52872286..52874915,2	MCF-7	breast:
36	chr19:52875265..52876916-chr19:52889763..52892567,2	MCF-7	breast:
37	chr19:52875265..52876916-chr19:52889763..52892567,2	MCF-7	breast:
38	chr19:52893005..52896642-chr19:52900305..52903556,3	MCF-7	breast:
39	chr19:52861080..52862902-chr19:52863243..52865852,2	K562	blood:
40	chr19:52908988..52911904-chr19:52916328..52918022,2	K562	blood:
41	chr19:52829210..52832192-chr19:52833686..52836622,2	K562	blood:
42	chr19:52838795..52841074-chr19:52850925..52853608,3	MCF-7	breast:

(count:47 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF83-1	chr19:52899863-52900005	ENSG00000269834.1
2	lnc-ZNF534-2	chr19:52914625-52917621	NONHSAT067551
3	lnc-ZNF83-1	chr19:52899618-52899752	ENSG00000246015
4	lnc-ZNF83-1	chr19:52900715-52901010	ENSG00000269834.1
5	lnc-ZNF83-1	chr19:52899569-52899752	NONHSAT067545
6	lnc-ZNF83-1	chr19:52900715-52901010	NONHSAT067545
7	lnc-ZNF880-1	chr19:52905200-52905270	NONHSAT067550
8	lnc-ZNF83-1	chr19:52899863-52900005	NONHSAT067545
9	lnc-ZNF836-4	chr19:52848284-52848482	ENSG00000269535.1
10	lnc-ZNF83-1	chr19:52900715-52901010	NONHSAT067546
11	lnc-ZNF83-1	chr19:52898044-52898100	ENSG00000269834.1
12	lnc-ZNF83-1	chr19:52892272-52892556	ENSG00000269834.1
13	lnc-ZNF83-1	chr19:52899863-52900005	ENSG00000246015
14	lnc-ZNF83-1	chr19:52900715-52901019	ENSG00000269834.1
15	lnc-ZNF83-1	chr19:52900448-52900520	ENSG00000269834.1
16	lnc-ZNF83-1	chr19:52900715-52901010	ENSG00000246015
17	lnc-ZNF83-1	chr19:52897580-52899003	NONHSAT067544
18	lnc-ZNF83-1	chr19:52898780-52899003	ENSG00000269834.1
19	lnc-ZNF83-1	chr19:52892095-52896456	ENSG00000246015
20	lnc-ZNF83-1	chr19:52897584-52899003	ENSG00000246015
21	lnc-ZNF83-1	chr19:52900715-52900922	ENSG00000269834.1
22	lnc-ZNF480-2	chr19:52850960-52851465	NONHSAT067537
23	lnc-ZNF83-1	chr19:52892095-52892698	NONHSAT067540
24	lnc-ZNF83-1	chr19:52899618-52899752	NONHSAT067544
25	lnc-ZNF83-1	chr19:52897580-52899003	NONHSAT067545
26	lnc-ZNF836-4	chr19:52833583-52833643	ENSG00000269535.1
27	lnc-ZNF880-1	chr19:52901620-52901872	NONHSAT067550
28	lnc-ZNF83-1	chr19:52900715-52901010	NONHSAT067544
29	lnc-ZNF880-1	chr19:52901153-52901273	NONHSAT067550
30	lnc-ZNF83-1	chr19:52897580-52899003	NONHSAT067546
31	lnc-ZNF83-1	chr19:52899892-52900520	ENSG00000269834.1
32	lnc-ZNF83-1	chr19:52899569-52899752	ENSG00000246015
33	lnc-ZNF534-2	chr19:52918377-52918606	NONHSAT067551
34	lnc-ZNF534-2	chr19:52918192-52918292	NONHSAT067551
35	lnc-ZNF880-1	chr19:52904938-52905006	NONHSAT067550
36	lnc-ZNF480-2	chr19:52839557-52839759	NONHSAT067536
37	lnc-ZNF480-2	chr19:52839615-52839759	NONHSAT067537
38	lnc-ZNF83-1	chr19:52898972-52899003	ENSG00000246015
39	lnc-ZNF83-1	chr19:52899569-52899752	ENSG00000269834.1
40	lnc-ZNF480-2	chr19:52850346-52850508	NONHSAT067537
41	lnc-ZNF83-1	chr19:52899863-52900005	ENSG00000269834.1
42	lnc-ZNF83-1	chr19:52892095-52893679	ENSG00000246015
43	lnc-ZNF83-1	chr19:52892095-52894826	ENSG00000269834.1
44	lnc-ZNF83-1	chr19:52899618-52899752	ENSG00000269834.1
45	lnc-ZNF83-1	chr19:52898851-52899003	ENSG00000269834.1
46	lnc-ZNF83-1	chr19:52900715-52900985	ENSG00000246015
47	lnc-ZNF480-2	chr19:52850960-52851302	NONHSAT067536

No data

Variant related genes	Relation type
ZNF880	TF binding region
ZNF528	TF binding region
ENSG00000269834	TF binding region
ZNF610	TF binding region
ZNF534	TF binding region
ENSG00000269535	TF binding region
ZNF880	CpG island
ZNF528	CpG island
ENSG00000269834	CpG island
ZNF610	CpG island
ZNF534	CpG island
ENSG00000269535	CpG island
ENSG00000167555	chromatin interactions
ENSG00000167554	chromatin interactions
ENSG00000269535	chromatin interactions
ENSG00000198464	chromatin interactions
ENSG00000269102	chromatin interactions
ENSG00000196214	chromatin interactions
ENSG00000269834	chromatin interactions
ENSG00000204611	chromatin interactions
KIAA0196	miRNA target sites
CDC23	miRNA target sites
TPT1	miRNA target sites
NASP	miRNA target sites
ULBP2	miRNA target sites
BMP1	miRNA target sites
DLL1	miRNA target sites

Extended variants
information (count: 4309 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:4309 , 50 per page) page: 1 2 3 4 5 6 7 ... 87

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2115075	chr19:52832830-52832831	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs542969509	chr19:52832917-52832918	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs35392371	chr19:52832922-52832923	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs546590948	chr19:52832926-52832927	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs373142816	chr19:52832962-52832963	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs559791695	chr19:52832979-52832980	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs35481470	chr19:52832989-52832990	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs376923265	chr19:52833029-52833030	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs533680517	chr19:52833092-52833093	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs566360098	chr19:52833096-52833097	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs17769630	chr19:52833112-52833113	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs321932	chr19:52833142-52833143	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs530495021	chr19:52833155-52833156	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs548646756	chr19:52833174-52833175	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs10707475	chr19:52833179-52833180	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs7254876	chr19:52833215-52833216	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs534309833	chr19:52833241-52833242	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs187322671	chr19:52833261-52833262	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs10415728	chr19:52833284-52833285	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs375149180	chr19:52833316-52833317	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs538936355	chr19:52833328-52833329	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs556847149	chr19:52833369-52833370	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs575371294	chr19:52833376-52833377	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs536482466	chr19:52833386-52833387	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs555887475	chr19:52833399-52833400	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs112015557	chr19:52833424-52833425	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs372955548	chr19:52833428-52833429	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs574230092	chr19:52833439-52833440	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs183980287	chr19:52833462-52833463	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs559704557	chr19:52833463-52833464	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs550710621	chr19:52833531-52833532	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs148013136	chr19:52833553-52833554	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs545705914	chr19:52833570-52833571	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs186668526	chr19:52833583-52833584	ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
35	rs141926150	chr19:52833658-52833659	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs549207817	chr19:52833701-52833702	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs560648505	chr19:52833707-52833708	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs150247129	chr19:52833714-52833715	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs191128713	chr19:52833766-52833767	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs568972804	chr19:52833769-52833770	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs369748760	chr19:52833821-52833822	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs185635928	chr19:52833869-52833870	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs571240251	chr19:52833876-52833877	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs138918570	chr19:52833887-52833888	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs565611523	chr19:52833900-52833901	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs117904989	chr19:52833927-52833928	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs550725904	chr19:52833928-52833929	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs569212668	chr19:52833931-52833932	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs143310745	chr19:52833974-52833975	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs76500459	chr19:52833975-52833976	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Adrenocortical carcinoma	18281524	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Lung adenocarcinoma	21935476	CNVD

Chromatin state (count:3197 , 50 per page) page: 1 2 3 4 5 6 7 ... 64

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:52802400-52841800	ZNF genes & repeats	Liver	Liver
2	chr19:52814600-52836600	ZNF genes & repeats	Adipose Nuclei	Adipose
3	chr19:52833000-52839400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
4	chr19:52833400-52836800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
5	chr19:52833400-52836800	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
6	chr19:52833400-52837400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr19:52833600-52835200	ZNF genes & repeats	Primary T cells from cord blood	blood
8	chr19:52833600-52835600	ZNF genes & repeats	Duodenum Mucosa	Duodenum
9	chr19:52833600-52836600	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr19:52833800-52835000	ZNF genes & repeats	Colon Smooth Muscle	Colon
11	chr19:52834000-52835200	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
12	chr19:52834400-52836600	ZNF genes & repeats	Brain Hippocampus Middle	brain
13	chr19:52834800-52835000	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
14	chr19:52834800-52835000	ZNF genes & repeats	Fetal Lung	lung
15	chr19:52836200-52836600	ZNF genes & repeats	Brain Substantia Nigra	brain
16	chr19:52836200-52836800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
17	chr19:52836400-52836800	ZNF genes & repeats	Left Ventricle	heart
18	chr19:52836600-52836800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr19:52836600-52838800	Weak transcription	Brain Hippocampus Middle	brain
20	chr19:52836600-52838800	Weak transcription	Brain Substantia Nigra	brain
21	chr19:52836800-52837200	Weak transcription	Ovary	ovary
22	chr19:52836800-52838600	Weak transcription	H1 Cell Line	embryonic stem cell
23	chr19:52836800-52838600	Weak transcription	Primary T helper cells PMA-I stimulated	--
24	chr19:52836800-52838600	Weak transcription	Duodenum Smooth Muscle	Duodenum
25	chr19:52836800-52838800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr19:52836800-52839000	Weak transcription	Left Ventricle	heart
27	chr19:52837600-52838600	Weak transcription	Right Ventricle	heart
28	chr19:52838400-52838600	Enhancers	Dnd41	blood
29	chr19:52838400-52839000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr19:52838400-52839000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr19:52838600-52838800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
32	chr19:52838600-52838800	Enhancers	Brain Anterior Caudate	brain
33	chr19:52838600-52838800	ZNF genes & repeats	Rectal Smooth Muscle	rectum
34	chr19:52838600-52839000	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
35	chr19:52838600-52839000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr19:52838600-52839000	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr19:52838600-52839000	Enhancers	Right Ventricle	heart
38	chr19:52838600-52839000	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
39	chr19:52838600-52839000	Active TSS	Stomach Smooth Muscle	stomach
40	chr19:52838600-52839200	ZNF genes & repeats	Duodenum Mucosa	Duodenum
41	chr19:52838600-52839200	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
42	chr19:52838600-52839400	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
43	chr19:52838600-52839400	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
44	chr19:52838600-52839400	ZNF genes & repeats	Thymus	Thymus
45	chr19:52838600-52839400	Flanking Active TSS	Dnd41	blood
46	chr19:52838600-52839400	ZNF genes & repeats	NHLF	lung
47	chr19:52838600-52839600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr19:52838600-52839600	ZNF genes & repeats	Primary B cells from peripheral blood	blood
49	chr19:52838600-52839600	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
50	chr19:52838600-52839600	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin

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