No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs10415801 |
chr19:53164172-53164173 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs372169973 |
chr19:53164181-53164182 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs375324896 |
chr19:53164187-53164188 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs183633188 |
chr19:53164189-53164190 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs10417506 |
chr19:53164228-53164229 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
6 |
rs571692667 |
chr19:53164278-53164279 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs530989530 |
chr19:53164304-53164305 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs12151255 |
chr19:53164318-53164319 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
9 |
rs575890339 |
chr19:53164331-53164332 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs536448801 |
chr19:53164335-53164336 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs555105552 |
chr19:53164381-53164382 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs10417752 |
chr19:53164385-53164386 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
13 |
rs142565971 |
chr19:53164408-53164409 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs564616545 |
chr19:53164420-53164421 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs576467294 |
chr19:53164423-53164424 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs376209763 |
chr19:53164473-53164474 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs146899783 |
chr19:53164484-53164485 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs529954966 |
chr19:53164485-53164486 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs10418005 |
chr19:53164486-53164487 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
20 |
rs546229958 |
chr19:53164524-53164525 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs375075658 |
chr19:53164534-53164535 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs188116592 |
chr19:53164543-53164544 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs527458627 |
chr19:53164558-53164559 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs547146754 |
chr19:53164564-53164565 |
Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs11084173 |
chr19:53164617-53164618 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
26 |
rs539081153 |
chr19:53164630-53164631 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs11084174 |
chr19:53164644-53164645 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
28 |
rs569458390 |
chr19:53164664-53164665 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs536917061 |
chr19:53164710-53164711 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs60637486 |
chr19:53164712-53164713 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs192870908 |
chr19:53164725-53164726 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs11882437 |
chr19:53164741-53164742 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
33 |
rs537418801 |
chr19:53164744-53164745 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs558273325 |
chr19:53164762-53164763 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs576529187 |
chr19:53164779-53164780 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs11672162 |
chr19:53164781-53164782 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs556089327 |
chr19:53164782-53164783 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs574663495 |
chr19:53164908-53164909 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs542133508 |
chr19:53164989-53164990 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs6509661 |
chr19:53164990-53164991 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs527522295 |
chr19:53164992-53164993 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs546017539 |
chr19:53164993-53164994 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs565379800 |
chr19:53164995-53164996 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs532609998 |
chr19:53164996-53164997 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs112827347 |
chr19:53165015-53165016 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs373705078 |
chr19:53165051-53165052 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs4801925 |
chr19:53165057-53165058 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
48 |
rs530021912 |
chr19:53165065-53165066 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs548899564 |
chr19:53165090-53165091 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs149342732 |
chr19:53165107-53165108 |
Weak transcription Genic enhancers Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|