Variant report

Variant	nsv912349
Chromosome Location	chr19:53612855-53627777
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:33)
CpG islands
(count:61)
Chromatin interactive
region (count:4)
LncRNA
region (count:22)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:33 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:53624883-53625151	HepG2	liver:	n/a	n/a
2	CEBPB	chr19:53612975-53613054	K562	blood:	n/a	n/a
3	CTCF	chr19:53623018-53623081	GM10266	blood:	n/a	n/a
4	CTCF	chr19:53616720-53616870	HCPEpiC	choroid plexus:	n/a	n/a
5	CTCF	chr19:53614791-53614891	GM20000	blood:	n/a	n/a
6	EBF1	chr19:53624307-53624528	GM12878	blood:	n/a	n/a
7	FOXA1	chr19:53624855-53625144	HepG2	liver:	n/a	n/a
8	FOXA1	chr19:53624725-53625143	HepG2	liver:	n/a	n/a
9	FOXA1	chr19:53624757-53625161	HepG2	liver:	n/a	n/a
10	FOXA1	chr19:53624858-53625108	HepG2	liver:	n/a	n/a
11	FOXA2	chr19:53624857-53625121	HepG2	liver:	n/a	n/a
12	IRF3	chr19:53619308-53619338	GM12878	blood:	n/a	n/a
13	JUND	chr19:53615753-53615797	K562	blood:	n/a	n/a
14	MAFF	chr19:53615725-53615802	K562	blood:	n/a	n/a
15	MAFK	chr19:53620857-53620906	IMR90	lung:	n/a	n/a
16	MAFK	chr19:53615710-53615734	K562	blood:	n/a	n/a
17	MAFK	chr19:53620789-53620989	HepG2	liver:	n/a	n/a
18	MAX	chr19:53626608-53627007	HepG2	liver:	n/a	n/a
19	MAX	chr19:53626568-53626974	HepG2	liver:	n/a	n/a
20	NFYB	chr19:53614192-53614387	GM12878	blood:	n/a	n/a
21	PAX5	chr19:53615220-53615377	GM12878	blood:	n/a	n/a
22	PAX5	chr19:53615201-53615437	GM12878	blood:	n/a	n/a
23	POLR2A	chr19:53613897-53614024	K562	blood:	n/a	n/a
24	POLR2A	chr19:53620179-53620191	MCF10A-Er-Src	breast:	n/a	n/a
25	POLR2A	chr19:53612807-53612888	K562	blood:	n/a	n/a
26	REST	chr19:53615322-53615402	PANC-1	pancreas:	n/a	n/a
27	SIN3AK20	chr19:53615307-53615426	HepG2	liver:	n/a	n/a
28	SIN3AK20	chr19:53615296-53615451	HepG2	liver:	n/a	n/a
29	SPI1	chr19:53615314-53615432	GM12878	blood:	n/a	n/a
30	TAF1	chr19:53615287-53615392	GM12892	blood:	n/a	n/a
31	USF1	chr19:53615296-53615429	HepG2	liver:	n/a	n/a
32	USF1	chr19:53626681-53626899	HepG2	liver:	n/a	n/a
33	USF2	chr19:53614319-53614353	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53619086-53619136	NB4	blood:	n/a
2	chr19:53619086-53619136	Hepatocyte	liver:	n/a
3	chr19:53619086-53619136	HCF	heart:	n/a
4	chr19:53619086-53619136	HCPEpiC	choroid plexus:	n/a
5	chr19:53619086-53619136	Caco-2	colon:	n/a
6	chr19:53619086-53619136	SK-N-MC	brain:	n/a
7	chr19:53619086-53619136	GM12891	blood:	n/a
8	chr19:53619086-53619136	AG09319	gingival:	n/a
9	chr19:53619086-53619136	LNCaP	prostate:	n/a
10	chr19:53619086-53619136	U87	brain:	n/a
11	chr19:53619086-53619136	GM12878	blood:	n/a
12	chr19:53619086-53619136	K562	blood:	n/a
13	chr19:53619086-53619136	H1-hESC	embryonic stem cell:	embryo
14	chr19:53619086-53619136	HAEpiC	amniotic membrane:	n/a
15	chr19:53619086-53619136	HNPCEpiC	eye:	n/a
16	chr19:53619086-53619136	AG04449	skin:	fetal
17	chr19:53619086-53619136	HIPEpiC	eye:	n/a
18	chr19:53619086-53619136	NHBE	bronchial:	n/a
19	chr19:53619086-53619136	HRPEpiC	eye:	n/a
20	chr19:53619086-53619136	CMK	blood:	n/a
21	chr19:53619086-53619136	GM12892	blood:	n/a
22	chr19:53619086-53619136	HRE	kidney:	n/a
23	chr19:53619086-53619136	HL-60	blood:	n/a
24	chr19:53619086-53619136	HEEpiC	esophagus:	n/a
25	chr19:53619086-53619136	NT2-D1	testis:	n/a
26	chr19:53619086-53619136	MCF-7	breast:	n/a
27	chr19:53619086-53619136	MCF10A-Er-Src	breast:	n/a
28	chr19:53619086-53619136	NHDF-neo	bronchial:	n/a
29	chr19:53619086-53619136	GM19239	blood:	n/a
30	chr19:53619086-53619136	SAEC	small airway:	n/a
31	chr19:53619086-53619136	Hela-S3	cervix:	n/a
32	chr19:53619086-53619136	GM06990	blood:	n/a
33	chr19:53619086-53619136	SKMC	muscle:	n/a
34	chr19:53619086-53619136	T-47D	breast:	n/a
35	chr19:53619086-53619136	AG09309	skin:	n/a
36	chr19:53619086-53619136	BE2_C	brain:	n/a
37	chr19:53619086-53619136	SK-N-SH_RA	brain:	n/a
38	chr19:53619086-53619136	ECC-1	luminal epithelium:	n/a
39	chr19:53619086-53619136	HEK293	kidney:	embryo
40	chr19:53619086-53619136	A549	lung:	n/a
41	chr19:53619086-53619136	PrEC	prostate:	n/a
42	chr19:53619086-53619136	PANC-1	pancreas:	n/a
43	chr19:53619086-53619136	AoSMC	blood vessel:	n/a
44	chr19:53619086-53619136	RPTEC	kidney:	n/a
45	chr19:53619086-53619136	HUVEC	blood vessel:	n/a
46	chr19:53619086-53619136	AG10803	skin:	n/a
47	chr19:53619086-53619136	HCM	heart:	n/a
48	chr19:53619086-53619136	ProgFib	skin:	n/a
49	chr19:53619086-53619136	SK-N-SH	brain:	n/a
50	chr19:53619086-53619136	HPAEpiC	pulmonary alveolar:	n/a

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53617497..53619438-chr19:53623367..53626154,3	K562	blood:
2	chr19:53461518..53463448-chr19:53612422..53614320,2	K562	blood:
3	chr19:53617497..53619438-chr19:53623367..53626154,3	K562	blood:
4	chr19:53618140..53620226-chr19:53631544..53634250,2	MCF-7	breast:

(count:22 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-VN1R2-9	chr19:53611890-53613152	NONHSAT067620
2	lnc-ZNF347-2	chr19:53612860-53613161	NONHSAT067630
3	lnc-ZNF347-2	chr19:53619566-53619686	NONHSAT067632
4	lnc-ZNF347-2	chr19:53625657-53625869	NONHSAT067636
5	lnc-ZNF347-2	chr19:53619566-53619686	NONHSAT067633
6	lnc-ZNF347-2	chr19:53619566-53619686	NONHSAT067635
7	lnc-ZNF347-2	chr19:53618957-53619064	NONHSAT067632
8	lnc-ZNF347-2	chr19:53612991-53613161	NONHSAT067631
9	lnc-ZNF347-2	chr19:53619513-53619686	NONHSAT067636
10	lnc-ZNF347-2	chr19:53618511-53618585	NONHSAT067632
11	lnc-ZNF347-2	chr19:53627046-53627159	NONHSAT067632
12	lnc-ZNF347-2	chr19:53625657-53625869	NONHSAT067635
13	lnc-ZNF347-2	chr19:53619010-53619064	NONHSAT067634
14	lnc-ZNF347-2	chr19:53619566-53619686	NONHSAT067634
15	lnc-ZNF347-2	chr19:53625657-53625865	NONHSAT067630
16	lnc-ZNF347-2	chr19:53625915-53625996	NONHSAT067633
17	lnc-ZNF347-2	chr19:53626754-53626908	NONHSAT067633
18	lnc-ZNF347-2	chr19:53619037-53619177	NONHSAT067635
19	lnc-ZNF347-2	chr19:53625915-53625996	NONHSAT067631
20	lnc-ZNF347-2	chr19:53625915-53625996	NONHSAT067632
21	lnc-ZNF347-2	chr19:53618987-53619177	NONHSAT067633
22	lnc-ZNF347-2	chr19:53625657-53625869	NONHSAT067634

No data

Variant related genes	Relation type
ZNF415	TF binding region
ZNF415	CpG island
ENSG00000170954	chromatin interactions

Extended variants
information (count: 667 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:667 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs16984466	chr19:53612855-53612856	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs116534642	chr19:53612859-53612860	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
3	rs147436637	chr19:53612904-53612905	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
4	rs138977475	chr19:53612916-53612917	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
5	rs568925810	chr19:53612922-53612923	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
6	rs374823297	chr19:53612931-53612932	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
7	rs148927334	chr19:53612962-53612963	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
8	rs1054484	chr19:53612989-53612990	Strong transcription Weak transcription ZNF genes & repeats	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs138219869	chr19:53613016-53613017	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
10	rs200247975	chr19:53613048-53613049	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
11	rs139795456	chr19:53613064-53613065	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
12	rs567894334	chr19:53613090-53613091	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
13	rs146097002	chr19:53613113-53613114	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
14	rs111724226	chr19:53613116-53613117	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
15	rs372401173	chr19:53613133-53613134	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
16	rs547281483	chr19:53613153-53613154	Weak transcription ZNF genes & repeats Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
17	rs369230536	chr19:53613179-53613180	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs182283999	chr19:53613198-53613199	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs571544074	chr19:53613203-53613204	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs112345249	chr19:53613223-53613224	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs149873963	chr19:53613286-53613287	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs5828534	chr19:53613331-53613332	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs397784854	chr19:53613338-53613339	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs188049686	chr19:53613377-53613378	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs576192324	chr19:53613422-53613423	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs193261322	chr19:53613424-53613425	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs537903906	chr19:53613441-53613442	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs554319199	chr19:53613453-53613454	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs573038347	chr19:53613458-53613459	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs540145537	chr19:53613467-53613468	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs1550578	chr19:53613473-53613474	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs577066055	chr19:53613488-53613489	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs183643886	chr19:53613514-53613515	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs144912941	chr19:53613558-53613559	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs532578290	chr19:53613591-53613592	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs149057724	chr19:53613609-53613610	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs529799031	chr19:53613613-53613614	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs1550577	chr19:53613618-53613619	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs561322123	chr19:53613625-53613626	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs142114567	chr19:53613630-53613631	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs557436022	chr19:53613644-53613645	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs4277438	chr19:53613697-53613698	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs57098159	chr19:53613825-53613826	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs560743978	chr19:53613851-53613852	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs151289294	chr19:53613861-53613862	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs550542771	chr19:53613865-53613866	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs568935344	chr19:53613904-53613905	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs377752949	chr19:53613905-53613906	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs536493568	chr19:53613913-53613914	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs371226914	chr19:53613920-53613921	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Breast cancer	20459607	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD

Chromatin state (count:565 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53607200-53614600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr19:53607200-53615400	Weak transcription	Esophagus	oesophagus
3	chr19:53607400-53615400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr19:53607400-53615400	Weak transcription	Thymus	Thymus
5	chr19:53607400-53630600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr19:53607600-53614400	Weak transcription	Fetal Stomach	stomach
7	chr19:53607600-53620600	Weak transcription	Stomach Mucosa	stomach
8	chr19:53607600-53635000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr19:53609600-53613000	Strong transcription	Fetal Brain Female	brain
10	chr19:53610200-53614400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr19:53610200-53620600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr19:53610800-53614400	ZNF genes & repeats	Primary B cells from cord blood	blood
13	chr19:53610800-53619200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
14	chr19:53611000-53613000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr19:53611000-53613800	ZNF genes & repeats	Primary T cells from cord blood	blood
16	chr19:53611200-53613000	Strong transcription	H1 Cell Line	embryonic stem cell
17	chr19:53611200-53613000	Strong transcription	HUES64 Cell Line	embryonic stem cell
18	chr19:53611200-53613000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr19:53611200-53613000	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr19:53611200-53613000	ZNF genes & repeats	Adipose Nuclei	Adipose
21	chr19:53611200-53613000	Strong transcription	Brain Anterior Caudate	brain
22	chr19:53611200-53613000	Strong transcription	Fetal Heart	heart
23	chr19:53611200-53613200	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr19:53611200-53613200	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr19:53611200-53613200	Strong transcription	Brain Angular Gyrus	brain
26	chr19:53611200-53613200	Strong transcription	Brain Cingulate Gyrus	brain
27	chr19:53611200-53613200	Strong transcription	Fetal Muscle Trunk	muscle
28	chr19:53611200-53613200	Strong transcription	Placenta	Placenta
29	chr19:53611200-53613200	Strong transcription	Dnd41	blood
30	chr19:53611200-53613400	ZNF genes & repeats	Liver	Liver
31	chr19:53611200-53613400	Strong transcription	Osteobl	bone
32	chr19:53611200-53613600	Strong transcription	Placenta Amnion	Placenta Amnion
33	chr19:53611200-53621200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr19:53611400-53613000	Strong transcription	H9 Cell Line	embryonic stem cell
35	chr19:53611400-53613000	Strong transcription	HUES6 Cell Line	embryonic stem cell
36	chr19:53611400-53613000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
37	chr19:53611400-53613000	Strong transcription	Brain Inferior Temporal Lobe	brain
38	chr19:53611400-53614400	Strong transcription	Brain Substantia Nigra	brain
39	chr19:53611600-53613000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
40	chr19:53611600-53613000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr19:53611600-53613000	Strong transcription	Skeletal Muscle Female	skeletal muscle
42	chr19:53611600-53613200	Strong transcription	Fetal Thymus	thymus
43	chr19:53611600-53613600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr19:53611600-53613600	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
45	chr19:53611600-53613600	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
46	chr19:53611800-53613000	Strong transcription	HUES48 Cell Line	embryonic stem cell
47	chr19:53611800-53613000	Strong transcription	Fetal Muscle Leg	muscle
48	chr19:53611800-53613000	Strong transcription	Lung	lung
49	chr19:53611800-53613000	Strong transcription	Pancreas	Pancrea
50	chr19:53611800-53613000	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links