Variant report

Variant nsv912873
Chromosome Location chr20:40601021-40675704
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:40599600-40602600 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr20:40600200-40601400 Enhancers HUES6 Cell Line embryonic stem cell
3 chr20:40600200-40601600 Enhancers HUES48 Cell Line embryonic stem cell
4 chr20:40600600-40601200 Enhancers ES-WA7 Cell Line embryonic stem cell
5 chr20:40600600-40601400 Enhancers ES-I3 Cell Line embryonic stem cell
6 chr20:40600600-40601600 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr20:40602600-40606000 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr20:40603200-40603400 Enhancers ES-WA7 Cell Line embryonic stem cell
9 chr20:40606200-40607000 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr20:40607200-40607800 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr20:40607600-40607800 Bivalent Enhancer HepG2 liver
12 chr20:40618400-40618600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr20:40618600-40618800 Enhancers HUVEC blood vessel
14 chr20:40618600-40619000 Enhancers Fetal Brain Male brain
15 chr20:40618600-40619200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
16 chr20:40618600-40619400 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr20:40618600-40619400 Enhancers Fetal Muscle Leg muscle
18 chr20:40618600-40619800 Enhancers Cortex derived primary cultured neurospheres brain
19 chr20:40618800-40619200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr20:40618800-40619200 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr20:40618800-40619200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr20:40618800-40619200 Flanking Active TSS HUVEC blood vessel
23 chr20:40619000-40619200 Bivalent Enhancer Brain Angular Gyrus brain
24 chr20:40619200-40620000 Enhancers HUVEC blood vessel
25 chr20:40619600-40619800 Enhancers Pancreatic Islets Pancreatic Islet
26 chr20:40625400-40631800 Weak transcription Right Atrium heart
27 chr20:40626200-40626600 Active TSS Brain Substantia Nigra brain
28 chr20:40627000-40627800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr20:40627000-40628000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
30 chr20:40627400-40627800 ZNF genes & repeats Spleen Spleen
31 chr20:40630200-40630400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
32 chr20:40633600-40635200 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr20:40633600-40635200 Enhancers HUES6 Cell Line embryonic stem cell
34 chr20:40633600-40635200 Enhancers iPS-15b Cell Line embryonic stem cell
35 chr20:40633600-40635400 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr20:40633800-40634000 Enhancers HUES64 Cell Line embryonic stem cell
37 chr20:40633800-40634600 Enhancers ES-WA7 Cell Line embryonic stem cell
38 chr20:40633800-40634800 Enhancers H1 Cell Line embryonic stem cell
39 chr20:40633800-40635200 Enhancers H9 Cell Line embryonic stem cell
40 chr20:40633800-40635200 Enhancers HUES48 Cell Line embryonic stem cell
41 chr20:40633800-40635400 Enhancers iPS-20b Cell Line embryonic stem cell
42 chr20:40634000-40634600 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr20:40634600-40635400 Enhancers HUES64 Cell Line embryonic stem cell
44 chr20:40649000-40649400 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr20:40656800-40658000 Enhancers Pancreatic Islets Pancreatic Islet
46 chr20:40658600-40665800 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr20:40664800-40666400 Enhancers Fetal Intestine Large intestine
48 chr20:40665400-40666000 Enhancers Fetal Intestine Small intestine
49 chr20:40665800-40668000 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr20:40668000-40668600 Weak transcription Breast Myoepithelial Primary Cells Breast

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