Variant report

Variant	nsv913415
Chromosome Location	chr21:17400916-17452276
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:221)
CpG islands
(count:244)
Chromatin interactive
region (count:5)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:221 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr21:17452104-17452625	HepG2	liver:	n/a	n/a
2	BRCA1	chr21:17452021-17452405	Hela-S3	cervix:	n/a	n/a
3	CEBPB	chr21:17405567-17405758	H1-hESC	embryonic stem cell:	n/a	chr21:17405673-17405684
4	CEBPB	chr21:17442502-17442706	MCF-7	breast:	n/a	n/a
5	CEBPB	chr21:17441592-17441700	HepG2	liver:	n/a	chr21:17441653-17441664 chr21:17441652-17441663
6	CEBPB	chr21:17405558-17405813	HepG2	liver:	n/a	chr21:17405673-17405684
7	CEBPB	chr21:17405647-17405807	A549	lung:	n/a	chr21:17405673-17405684
8	CEBPB	chr21:17412864-17413469	Hela-S3	cervix:	n/a	chr21:17412969-17412980 chr21:17412968-17412979 chr21:17412970-17412979
9	CEBPB	chr21:17452043-17452550	Hela-S3	cervix:	n/a	chr21:17452229-17452240
10	CEBPB	chr21:17412820-17413512	IMR90	lung:	n/a	chr21:17412969-17412980 chr21:17412968-17412979 chr21:17412970-17412979
11	CEBPB	chr21:17425250-17425311	HepG2	liver:	n/a	chr21:17425285-17425296
12	CEBPB	chr21:17451984-17452511	A549	lung:	n/a	chr21:17452229-17452240
13	CEBPB	chr21:17452112-17452490	MCF-7	breast:	n/a	chr21:17452229-17452240
14	CEBPB	chr21:17441548-17441765	IMR90	lung:	n/a	chr21:17441653-17441664 chr21:17441652-17441663
15	CEBPB	chr21:17419141-17419620	Hela-S3	cervix:	n/a	n/a
16	CEBPB	chr21:17412830-17413513	HepG2	liver:	n/a	chr21:17412969-17412980 chr21:17412968-17412979 chr21:17412970-17412979
17	CEBPB	chr21:17452028-17452533	IMR90	lung:	n/a	chr21:17452229-17452240
18	CEBPB	chr21:17452092-17452529	A549	lung:	n/a	chr21:17452229-17452240
19	CEBPB	chr21:17444904-17445415	IMR90	lung:	n/a	n/a
20	CEBPB	chr21:17405654-17405729	Hela-S3	cervix:	n/a	chr21:17405673-17405684
21	CEBPB	chr21:17452064-17452599	HepG2	liver:	n/a	chr21:17452229-17452240
22	CEBPB	chr21:17452140-17452410	A549	lung:	n/a	chr21:17452229-17452240
23	CTCF	chr21:17442542-17442639	ProgFib	skin:	n/a	n/a
24	CTCF	chr21:17442516-17442667	Medullo	brain:	n/a	n/a
25	CTCF	chr21:17442520-17442670	AG10803	skin:	n/a	n/a
26	CTCF	chr21:17442500-17442650	NHEK	skin:	n/a	n/a
27	CTCF	chr21:17442500-17442650	BJ	skin:	n/a	n/a
28	CTCF	chr21:17442534-17442666	NHEK	skin:	n/a	n/a
29	CTCF	chr21:17442500-17442650	HBMEC	blood vessel:	n/a	n/a
30	CTCF	chr21:17442540-17442690	HEEpiC	esophagus:	n/a	n/a
31	CTCF	chr21:17442520-17442670	AG09319	gingival:	n/a	n/a
32	CTCF	chr21:17442500-17442650	AG09309	skin:	n/a	n/a
33	CTCF	chr21:17445100-17445250	HCPEpiC	choroid plexus:	n/a	n/a
34	CTCF	chr21:17442560-17442710	HAc	cerebellar:	n/a	n/a
35	CTCF	chr21:17442500-17442650	AG09319	gingival:	n/a	n/a
36	CTCF	chr21:17442340-17442490	HFF-Myc	foreskin:	n/a	n/a
37	CTCF	chr21:17442533-17442665	LNCaP	prostate:	n/a	n/a
38	CTCF	chr21:17442560-17442710	SK-N-SH_RA	brain:	n/a	n/a
39	CTCF	chr21:17442520-17442670	HFF-Myc	foreskin:	n/a	n/a
40	CTCF	chr21:17431261-17431295	Lung_OC	lung:	n/a	n/a
41	CTCF	chr21:17442500-17442650	HCPEpiC	choroid plexus:	n/a	n/a
42	CTCF	chr21:17442820-17442970	BE2_C	brain:	n/a	n/a
43	CTCF	chr21:17442540-17442690	HAc	cerebellar:	n/a	n/a
44	CTCF	chr21:17445220-17445370	HMF	breast:	n/a	n/a
45	CTCF	chr21:17442500-17442650	BE2_C	brain:	n/a	n/a
46	CTCF	chr21:17442480-17442630	NHDF-neo	bronchial:	n/a	n/a
47	CTCF	chr21:17442160-17442310	HMF	breast:	n/a	n/a
48	CTCF	chr21:17442580-17442730	BJ	skin:	n/a	n/a
49	CTCF	chr21:17442540-17442690	HA-sp	spinal cord:	n/a	n/a
50	CTCF	chr21:17442519-17442706	Gliobla	brain:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr21:17441953-17442003	CMK	blood:	n/a
2	chr21:17442663-17442713	HEEpiC	esophagus:	n/a
3	chr21:17442803-17442853	HCT-116	colon:	n/a
4	chr21:17442803-17442853	HepG2	liver:	n/a
5	chr21:17442663-17442713	AG04450	lung:	fetal
6	chr21:17442803-17442853	SKMC	muscle:	n/a
7	chr21:17442467-17442517	NHDF-neo	bronchial:	n/a
8	chr21:17442467-17442517	HEK293	kidney:	embryo
9	chr21:17442467-17442517	SK-N-SH_RA	brain:	n/a
10	chr21:17442803-17442853	NH-A	brain:	n/a
11	chr21:17441953-17442003	NHBE	bronchial:	n/a
12	chr21:17442467-17442517	HRPEpiC	eye:	n/a
13	chr21:17442803-17442853	CMK	blood:	n/a
14	chr21:17441953-17442003	GM19239	blood:	n/a
15	chr21:17442467-17442517	PrEC	prostate:	n/a
16	chr21:17441953-17442003	LNCaP	prostate:	n/a
17	chr21:17441953-17442003	SAEC	small airway:	n/a
18	chr21:17442663-17442713	LNCaP	prostate:	n/a
19	chr21:17442467-17442517	GM12891	blood:	n/a
20	chr21:17442663-17442713	ECC-1	luminal epithelium:	n/a
21	chr21:17441953-17442003	GM12892	blood:	n/a
22	chr21:17442803-17442853	AG09309	skin:	n/a
23	chr21:17442663-17442713	U87	brain:	n/a
24	chr21:17441953-17442003	HL-60	blood:	n/a
25	chr21:17442467-17442517	IMR90	lung:	fetal
26	chr21:17442467-17442517	HEEpiC	esophagus:	n/a
27	chr21:17441953-17442003	SKMC	muscle:	n/a
28	chr21:17442467-17442517	AG09309	skin:	n/a
29	chr21:17442663-17442713	HRE	kidney:	n/a
30	chr21:17442663-17442713	SK-N-MC	brain:	n/a
31	chr21:17442663-17442713	NB4	blood:	n/a
32	chr21:17441953-17442003	GM12891	blood:	n/a
33	chr21:17442467-17442517	HCM	heart:	n/a
34	chr21:17441953-17442003	PANC-1	pancreas:	n/a
35	chr21:17442467-17442517	Jurkat	blood:	n/a
36	chr21:17442663-17442713	SK-N-SH_RA	brain:	n/a
37	chr21:17441953-17442003	AoSMC	blood vessel:	n/a
38	chr21:17442803-17442853	K562	blood:	n/a
39	chr21:17442663-17442713	HNPCEpiC	eye:	n/a
40	chr21:17442803-17442853	HEK293	kidney:	embryo
41	chr21:17442467-17442517	ovcar-3	ovarian:	n/a
42	chr21:17441953-17442003	HCF	heart:	n/a
43	chr21:17442663-17442713	BJ	skin:	n/a
44	chr21:17441953-17442003	NB4	blood:	n/a
45	chr21:17442663-17442713	H1-hESC	embryonic stem cell:	embryo
46	chr21:17442467-17442517	NB4	blood:	n/a
47	chr21:17441953-17442003	ECC-1	luminal epithelium:	n/a
48	chr21:17441953-17442003	Hepatocyte	liver:	n/a
49	chr21:17441953-17442003	ovcar-3	ovarian:	n/a
50	chr21:17442663-17442713	HCT-116	colon:	n/a

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr21:17409413..17411769-chr21:17412159..17413717,2	MCF-7	breast:
2	chr21:17431681..17433944-chr21:17437804..17439810,2	MCF-7	breast:
3	chr21:17405738..17408862-chr21:17414467..17417425,3	MCF-7	breast:
4	chr21:17431681..17433944-chr21:17437804..17439810,2	MCF-7	breast:
5	chr21:17409413..17411769-chr21:17412159..17413717,2	MCF-7	breast:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-USP25-2	chr21:17442842-17442868	ENSG00000215386.6
2	lnc-USP25-2	chr21:17442842-17442868	ENSG00000215386
3	lnc-USP25-2	chr21:17443434-17443718	ENSG00000215386.6
4	lnc-USP25-2	chr21:17442853-17442887	ENSG00000215386.6
5	lnc-USP25-2	chr21:17443434-17443718	ENSG00000215386.6
6	lnc-USP25-2	chr21:17443434-17443718	ENSG00000215386
7	lnc-USP25-2	chr21:17443434-17443718	ENSG00000215386
8	lnc-USP25-2	chr21:17443553-17443718	ENSG00000215386

No data

Variant related genes	Relation type
RNU6-426P	TF binding region
LINC00478	TF binding region
RNU6-426P	CpG island
LINC00478	CpG island
ENSG00000252273	chromatin interactions
DCBLD2	miRNA target sites
ATAD2	miRNA target sites
STAT3	miRNA target sites
MEF2C	miRNA target sites

Extended variants
information (count: 1120 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:1120 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs372650348	chr21:17406404-17406405	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs531032402	chr21:17406467-17406468	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs73894724	chr21:17406475-17406476	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs192592701	chr21:17406512-17406513	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs547734407	chr21:17406654-17406655	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs142479612	chr21:17406690-17406691	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs369456793	chr21:17406704-17406705	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs530571080	chr21:17406708-17406709	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs550391798	chr21:17406709-17406710	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs554942057	chr21:17406721-17406722	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs531671525	chr21:17406723-17406724	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs184576283	chr21:17406754-17406755	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs559210864	chr21:17406791-17406792	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs2000700	chr21:17406819-17406820	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs535331690	chr21:17406833-17406834	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs145083454	chr21:17406865-17406866	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs189499288	chr21:17406944-17406945	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs543826598	chr21:17406984-17406985	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs557145170	chr21:17407029-17407030	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs16992931	chr21:17407044-17407045	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs528462018	chr21:17407076-17407077	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs545551661	chr21:17407087-17407088	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs2823570	chr21:17407125-17407126	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs2823571	chr21:17407133-17407134	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs541714053	chr21:17407144-17407145	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs180687171	chr21:17407160-17407161	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs530407101	chr21:17407238-17407239	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs186722621	chr21:17407239-17407240	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs2823572	chr21:17407300-17407301	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs115197519	chr21:17407301-17407302	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs138967843	chr21:17407355-17407356	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs2823573	chr21:17407365-17407366	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs8126662	chr21:17407382-17407383	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs547924730	chr21:17407454-17407455	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs189501961	chr21:17407461-17407462	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs181688718	chr21:17407487-17407488	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs568027965	chr21:17407531-17407532	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs186177637	chr21:17407556-17407557	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs373776729	chr21:17407604-17407605	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs190492592	chr21:17407690-17407691	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs577218539	chr21:17407702-17407703	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs149414536	chr21:17407707-17407708	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs550821900	chr21:17407719-17407720	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs566521895	chr21:17407750-17407751	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs73191491	chr21:17407756-17407757	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs114632422	chr21:17407816-17407817	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs541653663	chr21:17407863-17407864	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs144837307	chr21:17407904-17407905	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs73356686	chr21:17407964-17407965	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs539602261	chr21:17407981-17407982	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell lymphomas	19863542	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Metanephric adenoma	20802469	CNVD
Neuroblastoma	18923191	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute myeloid leukemia	21251322	CNVD
abnormal development	18461090	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	18923514	CNVD
Alzheimer''s disease	20877625	CNVD
Follicular lymphoma	20505157	CNVD
Alzheimer''s disease	21956041	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Epilepsy	20502679	CNVD
22q11.2 microdeletion syndrome	19750312	CNVD
Breast cancer	20409316	CNVD
Gastric cancer	18160780	CNVD

Chromatin state (count:289 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:17406400-17407600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr21:17406400-17407800	Enhancers	Fetal Brain Female	brain
3	chr21:17407600-17407800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr21:17407600-17409400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr21:17408000-17409200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr21:17408600-17409600	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr21:17408600-17409800	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr21:17409200-17409600	Enhancers	Primary hematopoietic stem cells	blood
9	chr21:17409200-17410000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr21:17409400-17410400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr21:17409600-17410000	Flanking Active TSS	Primary hematopoietic stem cells	blood
12	chr21:17409600-17410400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
13	chr21:17409800-17410200	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr21:17409800-17410400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
15	chr21:17410000-17410200	Enhancers	Primary hematopoietic stem cells	blood
16	chr21:17410000-17410400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr21:17410000-17410800	Enhancers	HMEC	breast
18	chr21:17410200-17410400	Flanking Active TSS	Primary hematopoietic stem cells	blood
19	chr21:17410400-17410800	Enhancers	Primary neutrophils fromperipheralblood	blood
20	chr21:17410400-17411000	Enhancers	Primary hematopoietic stem cells	blood
21	chr21:17410400-17411000	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr21:17410400-17411200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr21:17410400-17411200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr21:17411000-17412200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
25	chr21:17412200-17412400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
26	chr21:17414000-17416600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr21:17416400-17417000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr21:17418800-17419000	Enhancers	Osteobl	bone
29	chr21:17418800-17419400	Enhancers	Muscle Satellite Cultured Cells	--
30	chr21:17419000-17419400	Flanking Active TSS	Osteobl	bone
31	chr21:17419000-17419800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr21:17419000-17420000	Enhancers	Hela-S3	cervix
33	chr21:17419200-17419600	Enhancers	A549	lung
34	chr21:17419200-17419800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr21:17419400-17419600	Enhancers	Osteobl	bone
36	chr21:17419800-17420400	Enhancers	Fetal Lung	lung
37	chr21:17419800-17420800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr21:17421000-17421200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr21:17421600-17422200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr21:17428400-17428800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr21:17428800-17431000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr21:17429000-17429200	Enhancers	Fetal Brain Female	brain
43	chr21:17429200-17430200	Weak transcription	Fetal Brain Female	brain
44	chr21:17430200-17431600	Enhancers	Fetal Brain Female	brain
45	chr21:17431000-17431600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr21:17433000-17433800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr21:17433800-17435400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr21:17434400-17434800	Active TSS	Osteobl	bone
49	chr21:17441400-17441600	Enhancers	Brain Hippocampus Middle	brain
50	chr21:17441400-17441600	Enhancers	Fetal Brain Male	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links