Variant report
Variant | nsv914585 |
---|---|
Chromosome Location | chr22:23793801-23849044 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:575)
- CpG islands (count:366)
- Chromatin interactive region (count:4)
- LncRNA region (count:14)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:23810108-23810480 | HepG2 | liver: | n/a | n/a |
2 | BATF | chr22:23815225-23815371 | GM12878 | blood: | n/a | n/a |
3 | BATF | chr22:23827789-23828067 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr22:23817542-23817698 | GM12878 | blood: | n/a | n/a |
5 | BATF | chr22:23814219-23814432 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:23827783-23828060 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:23819974-23820417 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:23828883-23829053 | GM12878 | blood: | n/a | n/a |
9 | BCL11A | chr22:23819918-23820441 | GM12878 | blood: | n/a | n/a |
10 | BCL11A | chr22:23827775-23828065 | GM12878 | blood: | n/a | n/a |
11 | BCL11A | chr22:23820122-23820430 | GM12878 | blood: | n/a | n/a |
12 | BCL11A | chr22:23827797-23828034 | GM12878 | blood: | n/a | n/a |
13 | BCL11A | chr22:23828873-23829061 | GM12878 | blood: | n/a | n/a |
14 | BCL11A | chr22:23814796-23814963 | GM12878 | blood: | n/a | n/a |
15 | BCL11A | chr22:23814300-23814538 | GM12878 | blood: | n/a | n/a |
16 | BHLHE40 | chr22:23810151-23810450 | HepG2 | liver: | n/a | n/a |
17 | BHLHE40 | chr22:23800642-23800955 | HepG2 | liver: | n/a | n/a |
18 | BHLHE40 | chr22:23810125-23810453 | HepG2 | liver: | n/a | n/a |
19 | BHLHE40 | chr22:23810674-23810961 | HepG2 | liver: | n/a | n/a |
20 | BHLHE40 | chr22:23810980-23811147 | HepG2 | liver: | n/a | n/a |
21 | BHLHE40 | chr22:23828739-23829217 | HepG2 | liver: | n/a | n/a |
22 | BHLHE40 | chr22:23827779-23827957 | HepG2 | liver: | n/a | n/a |
23 | CEBPB | chr22:23840133-23840432 | HepG2 | liver: | n/a | chr22:23840256-23840267 |
24 | CEBPB | chr22:23840234-23840346 | Hela-S3 | cervix: | n/a | chr22:23840256-23840267 |
25 | CEBPB | chr22:23829922-23829928 | A549 | lung: | n/a | n/a |
26 | CEBPB | chr22:23840128-23840423 | IMR90 | lung: | n/a | chr22:23840256-23840267 |
27 | CEBPB | chr22:23814003-23814182 | HepG2 | liver: | n/a | n/a |
28 | CEBPB | chr22:23840138-23840428 | A549 | lung: | n/a | chr22:23840256-23840267 |
29 | CEBPB | chr22:23805382-23805445 | H1-hESC | embryonic stem cell: | n/a | n/a |
30 | CEBPB | chr22:23817889-23818034 | HepG2 | liver: | n/a | chr22:23817946-23817957 |
31 | CEBPB | chr22:23840135-23840380 | H1-hESC | embryonic stem cell: | n/a | chr22:23840256-23840267 |
32 | CHD2 | chr22:23825339-23825347 | GM12878 | blood: | n/a | n/a |
33 | CTCF | chr22:23827860-23827974 | Gliobla | brain: | n/a | n/a |
34 | CTCF | chr22:23810440-23810590 | HPAF | blood vessel: | n/a | n/a |
35 | CTCF | chr22:23827867-23828013 | LNCaP | prostate: | n/a | n/a |
36 | CTCF | chr22:23836535-23836620 | HepG2 | liver: | n/a | chr22:23836581-23836599 |
37 | CTCF | chr22:23828908-23829070 | GM10248 | blood: | n/a | n/a |
38 | CTCF | chr22:23827867-23828004 | GM10266 | blood: | n/a | n/a |
39 | CTCF | chr22:23841906-23842011 | GM19239 | blood: | n/a | n/a |
40 | CTCF | chr22:23836519-23836655 | MCF-7 | breast: | n/a | chr22:23836581-23836599 |
41 | CTCF | chr22:23843948-23843982 | NHEK | skin: | n/a | n/a |
42 | CTCF | chr22:23827868-23828017 | LNCaP | prostate: | n/a | n/a |
43 | CTCF | chr22:23803069-23803097 | GM12891 | blood: | n/a | n/a |
44 | CTCF | chr22:23827858-23827895 | GM12892 | blood: | n/a | n/a |
45 | CTCF | chr22:23827837-23827917 | A549 | lung: | n/a | n/a |
46 | CTCF | chr22:23836568-23836574 | H1-hESC | embryonic stem cell: | n/a | n/a |
47 | CTCF | chr22:23827801-23827897 | MCF-7 | breast: | n/a | n/a |
48 | CTCF | chr22:23798850-23798888 | LNCaP | prostate: | n/a | n/a |
49 | CTCF | chr22:23827861-23827946 | GM12891 | blood: | n/a | n/a |
50 | CTCF | chr22:23827856-23827895 | MCF-7 | breast: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23801478-23801528 | GM19239 | blood: | n/a |
2 | chr22:23799750-23799800 | Jurkat | blood: | n/a |
3 | chr22:23805705-23805755 | HL-60 | blood: | n/a |
4 | chr22:23805705-23805755 | Caco-2 | colon: | n/a |
5 | chr22:23801478-23801528 | HL-60 | blood: | n/a |
6 | chr22:23801478-23801528 | GM12892 | blood: | n/a |
7 | chr22:23805705-23805755 | AG09309 | skin: | n/a |
8 | chr22:23802708-23802758 | NT2-D1 | testis: | n/a |
9 | chr22:23804719-23804769 | NT2-D1 | testis: | n/a |
10 | chr22:23805705-23805755 | HEEpiC | esophagus: | n/a |
11 | chr22:23804719-23804769 | BE2_C | brain: | n/a |
12 | chr22:23802708-23802758 | HMEC | breast: | n/a |
13 | chr22:23805705-23805755 | Hela-S3 | cervix: | n/a |
14 | chr22:23802708-23802758 | SK-N-MC | brain: | n/a |
15 | chr22:23802502-23802552 | SKMC | muscle: | n/a |
16 | chr22:23801478-23801528 | IMR90 | lung: | fetal |
17 | chr22:23799750-23799800 | HIPEpiC | eye: | n/a |
18 | chr22:23802708-23802758 | PANC-1 | pancreas: | n/a |
19 | chr22:23801478-23801528 | AG10803 | skin: | n/a |
20 | chr22:23802502-23802552 | AG09309 | skin: | n/a |
21 | chr22:23805705-23805755 | ECC-1 | luminal epithelium: | n/a |
22 | chr22:23805705-23805755 | PFSK-1 | brain: | n/a |
23 | chr22:23802502-23802552 | T-47D | breast: | n/a |
24 | chr22:23805705-23805755 | SK-N-MC | brain: | n/a |
25 | chr22:23801478-23801528 | GM12878 | blood: | n/a |
26 | chr22:23799750-23799800 | HNPCEpiC | eye: | n/a |
27 | chr22:23799750-23799800 | NHBE | bronchial: | n/a |
28 | chr22:23802502-23802552 | ECC-1 | luminal epithelium: | n/a |
29 | chr22:23802502-23802552 | K562 | blood: | n/a |
30 | chr22:23804719-23804769 | HepG2 | liver: | n/a |
31 | chr22:23802708-23802758 | HCF | heart: | n/a |
32 | chr22:23802502-23802552 | BJ | skin: | n/a |
33 | chr22:23802502-23802552 | RPTEC | kidney: | n/a |
34 | chr22:23805705-23805755 | NHBE | bronchial: | n/a |
35 | chr22:23801478-23801528 | HEEpiC | esophagus: | n/a |
36 | chr22:23801478-23801528 | ProgFib | skin: | n/a |
37 | chr22:23805705-23805755 | HEK293 | kidney: | embryo |
38 | chr22:23804719-23804769 | PrEC | prostate: | n/a |
39 | chr22:23805705-23805755 | HNPCEpiC | eye: | n/a |
40 | chr22:23802708-23802758 | BJ | skin: | n/a |
41 | chr22:23802708-23802758 | HCPEpiC | choroid plexus: | n/a |
42 | chr22:23804719-23804769 | HL-60 | blood: | n/a |
43 | chr22:23802502-23802552 | Hela-S3 | cervix: | n/a |
44 | chr22:23805705-23805755 | HCM | heart: | n/a |
45 | chr22:23799750-23799800 | IMR90 | lung: | fetal |
46 | chr22:23802502-23802552 | H1-hESC | embryonic stem cell: | embryo |
47 | chr22:23799750-23799800 | HCF | heart: | n/a |
48 | chr22:23802502-23802552 | LNCaP | prostate: | n/a |
49 | chr22:23801478-23801528 | Hepatocyte | liver: | n/a |
50 | chr22:23802502-23802552 | U87 | brain: | n/a |
(count:4 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23811117..23813674-chr22:23862180..23864787,2 | MCF-7 | breast: | |
2 | chr22:23804034..23806130-chr22:23807353..23810139,2 | K562 | blood: | |
3 | chr22:23804034..23806130-chr22:23807353..23810139,2 | K562 | blood: | |
4 | chr19:47251886..47252386-chr22:23844118..23844644,2 | HCT-116 | colon: |
(count:14 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-IGLL1-2 | chr22:23825255-23825313 | ENSG00000178248 |
2 | lnc-IGLL1-2 | chr22:23829066-23829093 | ENSG00000178248 |
3 | lnc-IGLL1-2 | chr22:23812181-23812224 | ENSG00000178248 |
4 | lnc-RGL4-4 | chr22:23838524-23838710 | XLOC_014172 |
5 | lnc-IGLL1-2 | chr22:23812502-23812523 | ENSG00000178248 |
6 | lnc-RGL4-4 | chr22:23834998-23835089 | XLOC_014172 |
7 | lnc-RGL4-4 | chr22:23834998-23835089 | XLOC_014172 |
8 | lnc-IGLL1-2 | chr22:23816064-23816125 | ENSG00000178248 |
9 | lnc-IGLL1-2 | chr22:23815565-23815598 | ENSG00000178248 |
10 | lnc-IGLL1-2 | chr22:23824762-23824792 | ENSG00000178248 |
11 | lnc-IGLL1-2 | chr22:23822604-23822687 | ENSG00000178248 |
12 | lnc-IGLL1-2 | chr22:23812995-23813350 | ENSG00000178248 |
13 | lnc-RGL4-4 | chr22:23838524-23838710 | XLOC_014172 |
14 | lnc-RGL4-4 | chr22:23838524-23838909 | XLOC_014172 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000178248 | TF binding region |
ENSG00000227755 | TF binding region |
ENSG00000178248 | CpG island |
ENSG00000227755 | CpG island |
ENSG00000181027 | chromatin interactions |
SATB1 | miRNA target sites |
RUNX1 | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs5751670 | chr22:23793801-23793802 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
2 | rs564159904 | chr22:23793820-23793821 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
3 | rs533181930 | chr22:23793826-23793827 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
4 | rs181366823 | chr22:23793852-23793853 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
5 | rs535504982 | chr22:23793858-23793859 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
6 | rs145432742 | chr22:23793860-23793861 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
7 | rs529071695 | chr22:23793883-23793884 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
8 | rs375983131 | chr22:23793932-23793933 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
9 | rs61031142 | chr22:23793940-23793941 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
10 | rs553613574 | chr22:23793982-23793983 | Weak transcription Enhancers Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
11 | rs565597017 | chr22:23794010-23794011 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs113498562 | chr22:23794030-23794031 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs189103122 | chr22:23794034-23794035 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs571243947 | chr22:23794042-23794043 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs555692490 | chr22:23794049-23794050 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs556570126 | chr22:23794055-23794056 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs182045880 | chr22:23794090-23794091 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs371024887 | chr22:23794114-23794115 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs555937890 | chr22:23794123-23794124 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs572179201 | chr22:23794126-23794127 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs541103926 | chr22:23794139-23794140 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs148289321 | chr22:23794140-23794141 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs548400151 | chr22:23794171-23794172 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs543843069 | chr22:23794172-23794173 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs563387061 | chr22:23794188-23794189 | Weak transcription Bivalent Enhancer Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs529196054 | chr22:23794200-23794201 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
27 | rs548867858 | chr22:23794220-23794221 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
28 | rs7292421 | chr22:23794221-23794222 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
29 | rs9624178 | chr22:23794262-23794263 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
30 | rs375457901 | chr22:23794271-23794272 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
31 | rs150766485 | chr22:23794283-23794284 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
32 | rs187595020 | chr22:23794286-23794287 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
33 | rs149527498 | chr22:23794299-23794300 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
34 | rs570214234 | chr22:23794314-23794315 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
35 | rs386820073 | chr22:23794319-23794320 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
36 | rs6003719 | chr22:23794320-23794321 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
37 | rs146165308 | chr22:23794335-23794336 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
38 | rs111357694 | chr22:23794386-23794387 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
39 | rs143884227 | chr22:23794387-23794388 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
40 | rs541267575 | chr22:23794424-23794425 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
41 | rs116629951 | chr22:23794425-23794426 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
42 | rs371798507 | chr22:23794431-23794432 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
43 | rs115572772 | chr22:23794451-23794452 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
44 | rs563716015 | chr22:23794458-23794459 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
45 | rs529145176 | chr22:23794490-23794491 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
46 | rs542887536 | chr22:23794510-23794511 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
47 | rs114405139 | chr22:23794516-23794517 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
48 | rs73389482 | chr22:23794532-23794533 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
49 | rs551649099 | chr22:23794534-23794535 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
50 | rs564927634 | chr22:23794539-23794540 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Breast cancer | 21858162 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Schizophrenia | 17989066 | CNVD |
Cancer | 20164919 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Li-fraumeni syndrome | 18685109 | CNVD |
Breast cancer | 20409316 | CNVD |
Esophageal adenocarcinoma | 18820669 | CNVD |
Cancer | 19424424 | CNVD |
Non-syndromic sensorineural hearing loss | 17289997 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
abnormal development | 18461090 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:23791200-23794600 | Enhancers | Placenta | Placenta |
2 | chr22:23792200-23794200 | Enhancers | Dnd41 | blood |
3 | chr22:23792400-23795800 | Enhancers | Fetal Thymus | thymus |
4 | chr22:23792800-23794000 | Weak transcription | Ovary | ovary |
5 | chr22:23792800-23794400 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
6 | chr22:23792800-23812800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
7 | chr22:23793200-23794000 | Enhancers | Fetal Muscle Leg | muscle |
8 | chr22:23793200-23794600 | Enhancers | Thymus | Thymus |
9 | chr22:23793400-23794000 | Enhancers | Primary T cells from cord blood | blood |
10 | chr22:23793400-23794600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
11 | chr22:23793800-23794000 | Bivalent Enhancer | Fetal Adrenal Gland | Adrenal Gland |
12 | chr22:23794000-23794200 | Bivalent Enhancer | Foreskin Fibroblast Primary Cells skin02 | Skin |
13 | chr22:23794000-23794200 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
14 | chr22:23794000-23794800 | Enhancers | Ovary | ovary |
15 | chr22:23794000-23798800 | Weak transcription | Primary T cells from cord blood | blood |
16 | chr22:23794200-23794600 | Flanking Active TSS | Dnd41 | blood |
17 | chr22:23794200-23794800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
18 | chr22:23794400-23794600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
19 | chr22:23794400-23799000 | Weak transcription | Fetal Brain Female | brain |
20 | chr22:23794600-23794800 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr22:23794600-23794800 | Bivalent Enhancer | Thymus | Thymus |
22 | chr22:23794600-23795000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
23 | chr22:23794600-23796000 | Enhancers | Dnd41 | blood |
24 | chr22:23794600-23799000 | Weak transcription | Placenta | Placenta |
25 | chr22:23794800-23798800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
26 | chr22:23794800-23799000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
27 | chr22:23794800-23799200 | Weak transcription | Ovary | ovary |
28 | chr22:23794800-23799600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
29 | chr22:23795600-23795800 | Bivalent Enhancer | HepG2 | liver |
30 | chr22:23795800-23798200 | Weak transcription | Fetal Thymus | thymus |
31 | chr22:23796000-23798200 | Weak transcription | Dnd41 | blood |
32 | chr22:23798000-23798800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
33 | chr22:23798000-23804600 | Enhancers | Primary hematopoietic stem cells | blood |
34 | chr22:23798200-23798800 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
35 | chr22:23798200-23798800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
36 | chr22:23798200-23798800 | Enhancers | Dnd41 | blood |
37 | chr22:23798200-23804800 | Enhancers | Fetal Thymus | thymus |
38 | chr22:23798400-23800000 | Bivalent Enhancer | HepG2 | liver |
39 | chr22:23798600-23799400 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
40 | chr22:23798800-23799000 | Enhancers | Primary T cells from cord blood | blood |
41 | chr22:23798800-23799200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
42 | chr22:23798800-23799600 | Bivalent Enhancer | Primary T cells fromperipheralblood | blood |
43 | chr22:23798800-23799800 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
44 | chr22:23798800-23800000 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
45 | chr22:23798800-23800000 | Enhancers | Fetal Brain Male | brain |
46 | chr22:23798800-23800200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
47 | chr22:23798800-23800200 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
48 | chr22:23798800-23802600 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
49 | chr22:23798800-23803400 | Flanking Active TSS | Dnd41 | blood |
50 | chr22:23799000-23799200 | Enhancers | HUES6 Cell Line | embryonic stem cell |