Variant report

Variant	nsv916484
Chromosome Location	chr13:55528644-55979043
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:932)
CpG islands
(count:549)
Chromatin interactive
region (count:17)
LncRNA
region (count:12)
Mature miRNA
region (count: 2)
miRNA target
sites (count:0)

(count:932 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr13:55854587-55854631	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr13:55761085-55761087	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr13:55865721-55865796	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr13:55609400-55609437	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr13:55575088-55575361	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr13:55838444-55838840	H1-hESC	embryonic stem cell:	n/a	n/a
7	BHLHE40	chr13:55812695-55812736	GM12878	blood:	n/a	n/a
8	BHLHE40	chr13:55566557-55566577	GM12878	blood:	n/a	n/a
9	BHLHE40	chr13:55837247-55837530	GM12878	blood:	n/a	n/a
10	CEBPB	chr13:55540103-55540415	Hela-S3	cervix:	n/a	n/a
11	CEBPB	chr13:55571000-55571200	HepG2	liver:	n/a	n/a
12	CEBPB	chr13:55658810-55659132	A549	lung:	n/a	chr13:55658962-55658973
13	CEBPB	chr13:55876878-55877199	HepG2	liver:	n/a	chr13:55877024-55877037 chr13:55877024-55877035
14	CEBPB	chr13:55752073-55752328	H1-hESC	embryonic stem cell:	n/a	chr13:55752198-55752209
15	CEBPB	chr13:55651579-55651868	IMR90	lung:	n/a	chr13:55651706-55651723
16	CEBPB	chr13:55802807-55802950	HepG2	liver:	n/a	chr13:55802866-55802877
17	CEBPB	chr13:55876924-55877116	A549	lung:	n/a	chr13:55877024-55877037 chr13:55877024-55877035
18	CEBPB	chr13:55651572-55651871	HepG2	liver:	n/a	chr13:55651706-55651723
19	CEBPB	chr13:55876863-55877155	IMR90	lung:	n/a	chr13:55877024-55877037 chr13:55877024-55877035
20	CEBPB	chr13:55658786-55659147	HepG2	liver:	n/a	chr13:55658962-55658973
21	CEBPB	chr13:55776990-55777388	HepG2	liver:	n/a	chr13:55777077-55777088 chr13:55777076-55777087 chr13:55777076-55777089 chr13:55777075-55777092
22	CEBPB	chr13:55932599-55932844	HepG2	liver:	n/a	chr13:55932692-55932703
23	CEBPB	chr13:55658798-55659147	H1-hESC	embryonic stem cell:	n/a	chr13:55658962-55658973
24	CEBPB	chr13:55870843-55870987	H1-hESC	embryonic stem cell:	n/a	n/a
25	CEBPB	chr13:55907538-55907716	HepG2	liver:	n/a	chr13:55907660-55907671
26	CEBPB	chr13:55603464-55603809	H1-hESC	embryonic stem cell:	n/a	chr13:55603619-55603632 chr13:55603621-55603630 chr13:55603619-55603630 chr13:55603621-55603630 chr13:55603621-55603630
27	CEBPB	chr13:55804566-55804993	H1-hESC	embryonic stem cell:	n/a	n/a
28	CEBPB	chr13:55538226-55538497	HepG2	liver:	n/a	chr13:55538318-55538331 chr13:55538319-55538330
29	CEBPB	chr13:55658778-55659120	ECC-1	luminal epithelium:	n/a	chr13:55658962-55658973
30	CEBPB	chr13:55694979-55695179	HepG2	liver:	n/a	n/a
31	CEBPB	chr13:55658783-55659141	IMR90	lung:	n/a	chr13:55658962-55658973
32	CEBPB	chr13:55558878-55559168	HepG2	liver:	n/a	chr13:55559037-55559048
33	CEBPB	chr13:55870868-55871004	K562	blood:	n/a	n/a
34	CEBPB	chr13:55870760-55871039	IMR90	lung:	n/a	n/a
35	CEBPB	chr13:55651619-55651872	H1-hESC	embryonic stem cell:	n/a	chr13:55651706-55651723
36	CEBPB	chr13:55603439-55603795	IMR90	lung:	n/a	chr13:55603619-55603632 chr13:55603621-55603630 chr13:55603619-55603630 chr13:55603621-55603630 chr13:55603621-55603630
37	CEBPB	chr13:55802675-55803074	ECC-1	luminal epithelium:	n/a	chr13:55802866-55802877
38	CEBPB	chr13:55603451-55603799	K562	blood:	n/a	chr13:55603619-55603632 chr13:55603621-55603630 chr13:55603619-55603630 chr13:55603621-55603630 chr13:55603621-55603630
39	CEBPB	chr13:55745261-55745481	HepG2	liver:	n/a	chr13:55745328-55745339
40	CEBPB	chr13:55752126-55752249	HepG2	liver:	n/a	chr13:55752198-55752209
41	CEBPB	chr13:55603473-55603806	HepG2	liver:	n/a	chr13:55603619-55603632 chr13:55603621-55603630 chr13:55603619-55603630 chr13:55603621-55603630 chr13:55603621-55603630
42	CEBPB	chr13:55658829-55659084	K562	blood:	n/a	chr13:55658962-55658973
43	CEBPB	chr13:55563190-55563968	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD1	chr13:55614957-55615324	H1-hESC	embryonic stem cell:	n/a	n/a
45	CHD1	chr13:55616086-55617087	H1-hESC	embryonic stem cell:	n/a	n/a
46	CHD1	chr13:55614223-55614494	H1-hESC	embryonic stem cell:	n/a	n/a
47	CHD2	chr13:55647449-55647657	H1-hESC	embryonic stem cell:	n/a	n/a
48	CTCF	chr13:55819620-55819770	HRE	kidney:	n/a	n/a
49	CTCF	chr13:55819521-55819764	MCF-7	breast:	n/a	n/a
50	CTCF	chr13:55819520-55819670	Hela-S3	cervix:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:55628454-55628504	AG10803	skin:	n/a
2	chr13:55628257-55628307	AG04449	skin:	fetal
3	chr13:55818935-55818985	U87	brain:	n/a
4	chr13:55628454-55628504	GM12892	blood:	n/a
5	chr13:55818935-55818985	HCPEpiC	choroid plexus:	n/a
6	chr13:55587486-55587536	SK-N-SH_RA	brain:	n/a
7	chr13:55803558-55803608	T-47D	breast:	n/a
8	chr13:55576092-55576142	NHBE	bronchial:	n/a
9	chr13:55612647-55612697	AG09319	gingival:	n/a
10	chr13:55628257-55628307	HUVEC	blood vessel:	n/a
11	chr13:55576092-55576142	SK-N-SH	brain:	n/a
12	chr13:55587486-55587536	Hepatocyte	liver:	n/a
13	chr13:55818935-55818985	K562	blood:	n/a
14	chr13:55818935-55818985	MCF-7	breast:	n/a
15	chr13:55628673-55628723	HRPEpiC	eye:	n/a
16	chr13:55576092-55576142	AG09319	gingival:	n/a
17	chr13:55628673-55628723	SKMC	muscle:	n/a
18	chr13:55576092-55576142	ECC-1	luminal epithelium:	n/a
19	chr13:55628673-55628723	A549	lung:	n/a
20	chr13:55803558-55803608	HL-60	blood:	n/a
21	chr13:55612647-55612697	BJ	skin:	n/a
22	chr13:55628454-55628504	AoSMC	blood vessel:	n/a
23	chr13:55628257-55628307	H1-hESC	embryonic stem cell:	embryo
24	chr13:55628454-55628504	HRPEpiC	eye:	n/a
25	chr13:55794927-55794977	IMR90	lung:	fetal
26	chr13:55794927-55794977	AG09309	skin:	n/a
27	chr13:55587486-55587536	ovcar-3	ovarian:	n/a
28	chr13:55576092-55576142	HCF	heart:	n/a
29	chr13:55576092-55576142	HNPCEpiC	eye:	n/a
30	chr13:55628257-55628307	T-47D	breast:	n/a
31	chr13:55818935-55818985	RPTEC	kidney:	n/a
32	chr13:55628257-55628307	HPAEpiC	pulmonary alveolar:	n/a
33	chr13:55794927-55794977	K562	blood:	n/a
34	chr13:55628257-55628307	ovcar-3	ovarian:	n/a
35	chr13:55612647-55612697	HCPEpiC	choroid plexus:	n/a
36	chr13:55818935-55818985	GM06990	blood:	n/a
37	chr13:55794927-55794977	Hepatocyte	liver:	n/a
38	chr13:55794927-55794977	ProgFib	skin:	n/a
39	chr13:55628257-55628307	AG10803	skin:	n/a
40	chr13:55794927-55794977	LNCaP	prostate:	n/a
41	chr13:55628454-55628504	NH-A	brain:	n/a
42	chr13:55628257-55628307	GM12892	blood:	n/a
43	chr13:55794927-55794977	ECC-1	luminal epithelium:	n/a
44	chr13:55628454-55628504	HEEpiC	esophagus:	n/a
45	chr13:55612647-55612697	GM12892	blood:	n/a
46	chr13:55587486-55587536	IMR90	lung:	fetal
47	chr13:55628673-55628723	AG10803	skin:	n/a
48	chr13:55794927-55794977	BJ	skin:	n/a
49	chr13:55628673-55628723	PFSK-1	brain:	n/a
50	chr13:55628673-55628723	HEK293	kidney:	embryo

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr13:53824036..53825003-chr13:55819208..55820068,4	MCF-7	breast:
2	chr13:55791978..55793920-chr13:55794194..55796612,2	MCF-7	breast:
3	chr13:55881096..55883563-chr13:55885684..55887618,2	MCF-7	breast:
4	chr13:55881096..55883563-chr13:55885684..55887618,2	MCF-7	breast:
5	chr13:55949119..55951034-chr13:55961198..55963795,2	K562	blood:
6	chr13:55791978..55793920-chr13:55794194..55796612,2	MCF-7	breast:
7	chr13:55109906..55110862-chr13:55819209..55820062,2	MCF-7	breast:
8	chr13:55873183..55874920-chr13:55874937..55876738,2	MCF-7	breast:
9	chr13:55719312..55721477-chr13:55723763..55726204,2	K562	blood:
10	chr13:55819051..55819709-chr13:58198948..58199575,2	MCF-7	breast:
11	chr13:55719312..55721477-chr13:55723763..55726204,2	K562	blood:
12	chr13:55588254..55589830-chr13:55591495..55593128,2	K562	blood:
13	chr13:54759630..54760543-chr13:55804447..55805083,2	MCF-7	breast:
14	chr13:55949119..55951034-chr13:55961198..55963795,2	K562	blood:
15	chr13:55873183..55874920-chr13:55874937..55876738,2	MCF-7	breast:
16	chr13:55537336..55537947-chr5:45562607..45563107,2	MCF-7	breast:
17	chr13:55588254..55589830-chr13:55591495..55593128,2	K562	blood:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRR20A-7	chr13:55978884-55981315	NONHSAT034045
2	lnc-PRR20A-9	chr13:55898065-55903840	NONHSAT034043
3	lnc-OLFM4-6	chr13:55553445-55553526	XLOC_010401
4	lnc-PRR20A-10	chr13:55682117-55682626	NONHSAT034041
5	lnc-OLFM4-13	chr13:55628379-55629550	NONHSAT034038
6	lnc-PRR20A-10	chr13:55682789-55682990	NONHSAT034041
7	lnc-PRR20A-8	chr13:55962596-55964755	NONHSAT034044
8	lnc-PRR20A-7	chr13:55976660-55977123	NONHSAT034045
9	lnc-OLFM4-6	chr13:55560355-55560817	XLOC_010401
10	lnc-OLFM4-6	chr13:55554516-55554559	XLOC_010401
11	lnc-OLFM4-13	chr13:55613553-55627834	NONHSAT034038
12	lnc-PRR20A-9	chr13:55904010-55909000	NONHSAT034043

miRNA name	Chromosome Location	mirBase accession
hsa-miR-5007-3p	chr13:55748644-55748665	MIMAT0021036
hsa-miR-5007-5p	chr13:55748609-55748630	MIMAT0021035

No data

Variant related genes	Relation type
MIR5007	TF binding region
MIR5007	CpG island

Extended variants
information (count: 8744 )
Associated
traits (count: 106 )

Variant overlapped rSNPs/rCNVs (count:8744 , 50 per page) page: 1 2 3 4 5 6 7 ... 175

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs548320858	chr13:55528706-55528707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs191287572	chr13:55528717-55528718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs537390176	chr13:55528743-55528744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs182694348	chr13:55528768-55528769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs569740530	chr13:55528816-55528817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs538631781	chr13:55528865-55528866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs558641207	chr13:55528997-55528998	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs35360129	chr13:55529075-55529076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs143635147	chr13:55529077-55529078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs34090527	chr13:55529079-55529080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs3989152	chr13:55529099-55529100	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs199694379	chr13:55529100-55529101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs372820443	chr13:55529102-55529103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs572177516	chr13:55529112-55529113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs187642647	chr13:55529139-55529140	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs569933623	chr13:55529163-55529164	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs55969150	chr13:55529179-55529180	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs574933075	chr13:55529192-55529193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs373363448	chr13:55529205-55529206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs420371	chr13:55529229-55529230	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs9597062	chr13:55529265-55529266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs554674175	chr13:55529266-55529267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs576932647	chr13:55529282-55529283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs78253532	chr13:55529325-55529326	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs148504130	chr13:55529351-55529352	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs528149349	chr13:55529435-55529436	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs547964865	chr13:55529513-55529514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs561963080	chr13:55529546-55529547	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs190729834	chr13:55529591-55529592	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs550493547	chr13:55529611-55529612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs142997004	chr13:55529621-55529622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs200353040	chr13:55529663-55529664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs538668579	chr13:55529680-55529681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs146152623	chr13:55529700-55529701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs183242849	chr13:55529701-55529702	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs553830903	chr13:55529753-55529754	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs554744962	chr13:55529767-55529768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs140158524	chr13:55529810-55529811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs537217103	chr13:55529928-55529929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs368419941	chr13:55529972-55529973	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs577567654	chr13:55529987-55529988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs143809596	chr13:55530012-55530013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs567447577	chr13:55530019-55530020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs9569152	chr13:55530069-55530070	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs564899271	chr13:55530081-55530082	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs431078	chr13:55530105-55530106	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs541809147	chr13:55530198-55530199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs561610421	chr13:55530202-55530203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs35993450	chr13:55530308-55530309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs201418428	chr13:55530314-55530315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:106)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Squamous cell cancer	20885788	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Thyroid cancer	19087340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17133270	CNVD
Myoepithelioma	18604193	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Prostate cancer	17245344	CNVD
Colorectal cancer	21586687	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Retinoblastoma	19183342	CNVD
Developmental delay	21147756	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Merkel cell carcinoma	19020549	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21858162	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute myeloid leukemia	17237825	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Glioblastoma multiforme	21922591	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	20729466	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Gastric cancer	17908304	CNVD
Breast cancer	18852474	CNVD
Myelofibrosis	22110671	CNVD
craniofacial dysmorphism	21918468	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Breast cancer	17393978	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Urothelial carcinoma	21177765	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Esophageal squamous carcinoma	17470683	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Colorectal cancer	16774939	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:501 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:55519200-55535600	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr13:55523200-55529000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr13:55532800-55533200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr13:55534800-55536400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr13:55535600-55535800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr13:55535600-55536200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
7	chr13:55540200-55540600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr13:55547400-55547800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr13:55547600-55548000	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr13:55547600-55548000	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr13:55549400-55550200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr13:55550000-55550200	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr13:55550200-55550400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr13:55550200-55553400	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr13:55550400-55550800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr13:55550800-55551000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr13:55551000-55551200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr13:55551200-55552000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr13:55553200-55554200	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr13:55553400-55554400	Enhancers	HUES48 Cell Line	embryonic stem cell
21	chr13:55553800-55554200	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr13:55554000-55555800	Enhancers	Dnd41	blood
23	chr13:55554600-55555000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr13:55562000-55565600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr13:55563000-55563800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr13:55563200-55563800	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr13:55563200-55563800	Enhancers	HUES48 Cell Line	embryonic stem cell
28	chr13:55563600-55563800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
29	chr13:55563600-55563800	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr13:55563600-55563800	Enhancers	iPS-20b Cell Line	embryonic stem cell
31	chr13:55563600-55564200	Enhancers	Adipose Nuclei	Adipose
32	chr13:55563800-55566200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr13:55563800-55567400	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr13:55563800-55569200	Weak transcription	HUES64 Cell Line	embryonic stem cell
35	chr13:55563800-55569200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
36	chr13:55564000-55564600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
37	chr13:55566200-55566600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr13:55567400-55567600	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr13:55567600-55567800	Weak transcription	HUES48 Cell Line	embryonic stem cell
40	chr13:55568000-55569600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
41	chr13:55569000-55574200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr13:55569200-55571600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
43	chr13:55569200-55572000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
44	chr13:55569400-55572400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
45	chr13:55569600-55571600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
46	chr13:55569800-55572000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
47	chr13:55570600-55570800	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
48	chr13:55570800-55573000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
49	chr13:55570800-55575600	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr13:55571600-55573200	Weak transcription	iPS-20b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links