No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs549974321 |
chr9:140657553-140657554 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs570141785 |
chr9:140657586-140657587 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs537995112 |
chr9:140657593-140657594 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs554349034 |
chr9:140657602-140657603 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs574409336 |
chr9:140657605-140657606 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs71499182 |
chr9:140657628-140657629 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs151021520 |
chr9:140657636-140657637 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs57849153 |
chr9:140657637-140657638 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs533786300 |
chr9:140657643-140657644 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs553776619 |
chr9:140657653-140657654 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs577213879 |
chr9:140657660-140657661 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs72766947 |
chr9:140657676-140657677 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
13 |
rs150458864 |
chr9:140657698-140657699 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs576153217 |
chr9:140657723-140657724 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs138254095 |
chr9:140657757-140657758 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs149594396 |
chr9:140657760-140657761 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs571881252 |
chr9:140657780-140657781 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs11137207 |
chr9:140657825-140657826 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs559729220 |
chr9:140657882-140657883 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs73574192 |
chr9:140657897-140657898 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs11137208 |
chr9:140657950-140657951 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs533488033 |
chr9:140657967-140657968 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs7018624 |
chr9:140657971-140657972 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
24 |
rs7864181 |
chr9:140657973-140657974 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
25 |
rs529452454 |
chr9:140657981-140657982 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs147280179 |
chr9:140657996-140657997 |
Strong transcription ZNF genes & repeats Weak transcription Genic enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs557438846 |
chr9:140658036-140658037 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs139124162 |
chr9:140658052-140658053 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs374514184 |
chr9:140658061-140658062 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs143043943 |
chr9:140658065-140658066 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs574075254 |
chr9:140658087-140658088 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs539790679 |
chr9:140658094-140658095 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs147456168 |
chr9:140658147-140658148 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs367912770 |
chr9:140658174-140658175 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs576217510 |
chr9:140658175-140658176 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs536611595 |
chr9:140658181-140658182 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs182391412 |
chr9:140658197-140658198 |
Strong transcription ZNF genes & repeats Genic enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs555509343 |
chr9:140658221-140658222 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs572208229 |
chr9:140658250-140658251 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs112486678 |
chr9:140658265-140658266 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs541120272 |
chr9:140658305-140658306 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs564190013 |
chr9:140658332-140658333 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs148691274 |
chr9:140658336-140658337 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs544132651 |
chr9:140658350-140658351 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs3125798 |
chr9:140658364-140658365 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
46 |
rs529563535 |
chr9:140658382-140658383 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs549316567 |
chr9:140658405-140658406 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs186943791 |
chr9:140658406-140658407 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs142196975 |
chr9:140658416-140658417 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs569895098 |
chr9:140658424-140658425 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|