No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs576513198 |
chr1:76189924-76189925 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs537794866 |
chr1:76189937-76189938 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs558494664 |
chr1:76189939-76189940 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs61797339 |
chr1:76189946-76189947 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
5 |
rs574117609 |
chr1:76189957-76189958 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs541416173 |
chr1:76189962-76189963 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs553376990 |
chr1:76190012-76190013 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs578156664 |
chr1:76190023-76190024 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs545133313 |
chr1:76190036-76190037 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs114802787 |
chr1:76190037-76190038 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs531405752 |
chr1:76190055-76190056 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs114005461 |
chr1:76190072-76190073 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs574519305 |
chr1:76190106-76190107 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs1251076 |
chr1:76190111-76190112 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
15 |
rs113112056 |
chr1:76190153-76190154 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs150066561 |
chr1:76190157-76190158 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs374976396 |
chr1:76190162-76190163 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs547003002 |
chr1:76190195-76190196 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs565294797 |
chr1:76190207-76190208 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs17848068 |
chr1:76190216-76190217 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs551184035 |
chr1:76190305-76190306 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs563406308 |
chr1:76190321-76190322 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs61124994 |
chr1:76190331-76190332 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs537233466 |
chr1:76190345-76190346 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs554660770 |
chr1:76190349-76190350 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs556054701 |
chr1:76190376-76190377 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs567983446 |
chr1:76190381-76190382 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs535303084 |
chr1:76190393-76190394 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs371418479 |
chr1:76190404-76190405 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs553414128 |
chr1:76190407-76190408 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs373731510 |
chr1:76190426-76190427 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs371787277 |
chr1:76190435-76190436 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs59932454 |
chr1:76190439-76190440 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
34 |
rs376904926 |
chr1:76190449-76190450 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs367734665 |
chr1:76190456-76190457 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs545522153 |
chr1:76190458-76190459 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs201646499 |
chr1:76190483-76190484 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs372088389 |
chr1:76190489-76190490 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs375492495 |
chr1:76190513-76190514 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs369431746 |
chr1:76190550-76190551 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs369417973 |
chr1:76190564-76190565 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs116034618 |
chr1:76190568-76190569 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs1251075 |
chr1:76190569-76190570 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
44 |
rs561520228 |
chr1:76190605-76190606 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs529155733 |
chr1:76190611-76190612 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs540887454 |
chr1:76190629-76190630 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs377704457 |
chr1:76190643-76190644 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs558964981 |
chr1:76190664-76190665 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs371104977 |
chr1:76190677-76190678 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs1251074 |
chr1:76190690-76190691 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|