Variant report
Variant | nsv933316 |
---|---|
Chromosome Location | chr12:21017576-21404166 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1363)
- CpG islands (count:183)
- Chromatin interactive region (count:30)
- LncRNA region (count:3)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF1 | chr12:21387015-21387268 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr12:21392742-21392928 | K562 | blood: | n/a | n/a |
3 | BACH1 | chr12:21380331-21380521 | K562 | blood: | n/a | n/a |
4 | BACH1 | chr12:21322799-21322999 | K562 | blood: | n/a | n/a |
5 | BACH1 | chr12:21350777-21350898 | H1-hESC | embryonic stem cell: | n/a | n/a |
6 | BATF | chr12:21021928-21022137 | GM12878 | blood: | n/a | chr12:21022019-21022030 |
7 | BATF | chr12:21090344-21090547 | GM12878 | blood: | n/a | n/a |
8 | BHLHE40 | chr12:21138511-21138625 | GM12878 | blood: | n/a | n/a |
9 | BRCA1 | chr12:21103222-21103500 | Hela-S3 | cervix: | n/a | n/a |
10 | BRCA1 | chr12:21322801-21323167 | Hela-S3 | cervix: | n/a | n/a |
11 | BRCA1 | chr12:21308670-21308879 | H1-hESC | embryonic stem cell: | n/a | n/a |
12 | CEBPB | chr12:21065012-21065124 | HepG2 | liver: | n/a | chr12:21065034-21065045 |
13 | CEBPB | chr12:21038060-21038439 | A549 | lung: | n/a | n/a |
14 | CEBPB | chr12:21127431-21127656 | HepG2 | liver: | n/a | chr12:21127518-21127529 |
15 | CEBPB | chr12:21071557-21071721 | A549 | lung: | n/a | n/a |
16 | CEBPB | chr12:21243014-21243312 | A549 | lung: | n/a | chr12:21243166-21243177 |
17 | CEBPB | chr12:21036268-21036667 | A549 | lung: | n/a | chr12:21036463-21036474 chr12:21036307-21036318 |
18 | CEBPB | chr12:21282343-21282678 | HepG2 | liver: | n/a | chr12:21282598-21282609 chr12:21282528-21282539 |
19 | CEBPB | chr12:21233354-21233510 | A549 | lung: | n/a | n/a |
20 | CEBPB | chr12:21356519-21356864 | IMR90 | lung: | n/a | chr12:21356695-21356706 |
21 | CEBPB | chr12:21168858-21169067 | H1-hESC | embryonic stem cell: | n/a | chr12:21168919-21168930 |
22 | CEBPB | chr12:21038089-21038427 | A549 | lung: | n/a | n/a |
23 | CEBPB | chr12:21394753-21395095 | HepG2 | liver: | n/a | chr12:21394924-21394935 |
24 | CEBPB | chr12:21358479-21358755 | HepG2 | liver: | n/a | n/a |
25 | CEBPB | chr12:21243036-21243304 | IMR90 | lung: | n/a | chr12:21243166-21243177 |
26 | CEBPB | chr12:21260027-21260258 | HepG2 | liver: | n/a | chr12:21260128-21260137 chr12:21260126-21260137 chr12:21260126-21260139 |
27 | CEBPB | chr12:21260031-21260260 | IMR90 | lung: | n/a | chr12:21260128-21260137 chr12:21260126-21260137 chr12:21260126-21260139 |
28 | CEBPB | chr12:21358486-21358919 | A549 | lung: | n/a | n/a |
29 | CEBPB | chr12:21193668-21193806 | K562 | blood: | n/a | chr12:21193754-21193765 |
30 | CEBPB | chr12:21056070-21056238 | HepG2 | liver: | n/a | n/a |
31 | CEBPB | chr12:21175943-21176096 | H1-hESC | embryonic stem cell: | n/a | chr12:21176036-21176047 chr12:21176037-21176048 chr12:21176036-21176049 chr12:21176038-21176047 |
32 | CEBPB | chr12:21215636-21215960 | A549 | lung: | n/a | n/a |
33 | CEBPB | chr12:21114301-21114316 | A549 | lung: | n/a | n/a |
34 | CEBPB | chr12:21037942-21038507 | A549 | lung: | n/a | n/a |
35 | CEBPB | chr12:21133477-21133530 | HepG2 | liver: | n/a | n/a |
36 | CEBPB | chr12:21036282-21036646 | Hela-S3 | cervix: | n/a | chr12:21036463-21036474 chr12:21036307-21036318 |
37 | CEBPB | chr12:21193579-21193868 | A549 | lung: | n/a | chr12:21193754-21193765 |
38 | CEBPB | chr12:21234037-21234356 | A549 | lung: | n/a | chr12:21234179-21234190 |
39 | CEBPB | chr12:21193668-21193868 | Hela-S3 | cervix: | n/a | chr12:21193754-21193765 |
40 | CEBPB | chr12:21356579-21356809 | HepG2 | liver: | n/a | chr12:21356695-21356706 |
41 | CEBPB | chr12:21359589-21359876 | HepG2 | liver: | n/a | chr12:21359721-21359734 chr12:21359721-21359732 |
42 | CEBPB | chr12:21234009-21234357 | HepG2 | liver: | n/a | chr12:21234179-21234190 |
43 | CEBPB | chr12:21234048-21234229 | H1-hESC | embryonic stem cell: | n/a | chr12:21234179-21234190 |
44 | CEBPB | chr12:21168774-21169104 | HepG2 | liver: | n/a | chr12:21168919-21168930 |
45 | CEBPB | chr12:21271000-21271136 | HepG2 | liver: | n/a | chr12:21271080-21271091 |
46 | CEBPB | chr12:21246783-21246933 | HepG2 | liver: | n/a | chr12:21246828-21246839 |
47 | CEBPB | chr12:21260029-21260209 | A549 | lung: | n/a | chr12:21260128-21260137 chr12:21260126-21260137 chr12:21260126-21260139 |
48 | CEBPB | chr12:21394755-21395080 | A549 | lung: | n/a | chr12:21394924-21394935 |
49 | CEBPB | chr12:21193722-21193901 | H1-hESC | embryonic stem cell: | n/a | chr12:21193754-21193765 |
50 | CEBPB | chr12:21325090-21325330 | H1-hESC | embryonic stem cell: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:21283725-21283775 | HNPCEpiC | eye: | n/a |
2 | chr12:21324585-21324635 | Jurkat | blood: | n/a |
3 | chr12:21287375-21287425 | IMR90 | lung: | fetal |
4 | chr12:21283725-21283775 | ProgFib | skin: | n/a |
5 | chr12:21287375-21287425 | SK-N-MC | brain: | n/a |
6 | chr12:21283725-21283775 | HMEC | breast: | n/a |
7 | chr12:21283725-21283775 | LNCaP | prostate: | n/a |
8 | chr12:21287375-21287425 | SKMC | muscle: | n/a |
9 | chr12:21324585-21324635 | PFSK-1 | brain: | n/a |
10 | chr12:21324585-21324635 | NHBE | bronchial: | n/a |
11 | chr12:21287375-21287425 | ovcar-3 | ovarian: | n/a |
12 | chr12:21324585-21324635 | BE2_C | brain: | n/a |
13 | chr12:21283725-21283775 | HRPEpiC | eye: | n/a |
14 | chr12:21287375-21287425 | BE2_C | brain: | n/a |
15 | chr12:21283725-21283775 | GM19239 | blood: | n/a |
16 | chr12:21287375-21287425 | HCM | heart: | n/a |
17 | chr12:21324585-21324635 | SK-N-MC | brain: | n/a |
18 | chr12:21283725-21283775 | H1-hESC | embryonic stem cell: | embryo |
19 | chr12:21324585-21324635 | HUVEC | blood vessel: | n/a |
20 | chr12:21324585-21324635 | GM12891 | blood: | n/a |
21 | chr12:21324585-21324635 | AG09309 | skin: | n/a |
22 | chr12:21283725-21283775 | Caco-2 | colon: | n/a |
23 | chr12:21287375-21287425 | AG10803 | skin: | n/a |
24 | chr12:21283725-21283775 | A549 | lung: | n/a |
25 | chr12:21283725-21283775 | SAEC | small airway: | n/a |
26 | chr12:21283725-21283775 | SK-N-SH_RA | brain: | n/a |
27 | chr12:21324585-21324635 | SKMC | muscle: | n/a |
28 | chr12:21287375-21287425 | GM06990 | blood: | n/a |
29 | chr12:21287375-21287425 | SAEC | small airway: | n/a |
30 | chr12:21283725-21283775 | IMR90 | lung: | fetal |
31 | chr12:21287375-21287425 | NHDF-neo | bronchial: | n/a |
32 | chr12:21287375-21287425 | ECC-1 | luminal epithelium: | n/a |
33 | chr12:21283725-21283775 | HCPEpiC | choroid plexus: | n/a |
34 | chr12:21283725-21283775 | U87 | brain: | n/a |
35 | chr12:21283725-21283775 | NB4 | blood: | n/a |
36 | chr12:21283725-21283775 | MCF10A-Er-Src | breast: | n/a |
37 | chr12:21324585-21324635 | AG09319 | gingival: | n/a |
38 | chr12:21324585-21324635 | SAEC | small airway: | n/a |
39 | chr12:21287375-21287425 | HIPEpiC | eye: | n/a |
40 | chr12:21324585-21324635 | U87 | brain: | n/a |
41 | chr12:21287375-21287425 | NH-A | brain: | n/a |
42 | chr12:21283725-21283775 | AG09319 | gingival: | n/a |
43 | chr12:21287375-21287425 | Jurkat | blood: | n/a |
44 | chr12:21283725-21283775 | K562 | blood: | n/a |
45 | chr12:21287375-21287425 | HL-60 | blood: | n/a |
46 | chr12:21283725-21283775 | NHDF-neo | bronchial: | n/a |
47 | chr12:21287375-21287425 | GM19239 | blood: | n/a |
48 | chr12:21287375-21287425 | MCF-7 | breast: | n/a |
49 | chr12:21324585-21324635 | ProgFib | skin: | n/a |
50 | chr12:21324585-21324635 | IMR90 | lung: | fetal |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:21368652..21370975-chr12:21374890..21377722,2 | K562 | blood: | |
2 | chr12:21154478..21155199-chr12:21322720..21323314,2 | MCF-7 | breast: | |
3 | chr12:21103010..21104123-chr12:21218514..21219449,3 | MCF-7 | breast: | |
4 | chr12:21154478..21155199-chr12:21322720..21323314,2 | MCF-7 | breast: | |
5 | chr12:21099378..21100255-chr12:21322524..21323110,2 | MCF-7 | breast: | |
6 | chr12:21337800..21339752-chr12:21340612..21342590,2 | K562 | blood: | |
7 | chr12:21099420..21100309-chr12:21218592..21219170,2 | MCF-7 | breast: | |
8 | chr12:21099355..21100332-chr12:21322634..21323175,3 | MCF-7 | breast: | |
9 | chr12:21099378..21100255-chr12:21322524..21323110,2 | MCF-7 | breast: | |
10 | chr12:21372629..21374270-chr12:21375812..21377730,2 | K562 | blood: | |
11 | chr12:21367379..21369612-chr12:21376922..21378821,2 | K562 | blood: | |
12 | chr12:21220478..21221206-chr12:21228660..21229307,2 | MCF-7 | breast: | |
13 | chr12:21372629..21374270-chr12:21375812..21377730,2 | K562 | blood: | |
14 | chr12:21102918..21103853-chr12:21322562..21323307,3 | MCF-7 | breast: | |
15 | chr12:21099355..21100332-chr12:21322634..21323175,3 | MCF-7 | breast: | |
16 | chr12:21354085..21355966-chr12:21358587..21360653,2 | K562 | blood: | |
17 | chr12:21337800..21339752-chr12:21340612..21342590,2 | K562 | blood: | |
18 | chr12:21220478..21221206-chr12:21228660..21229307,2 | MCF-7 | breast: | |
19 | chr12:21368652..21370975-chr12:21374890..21377722,2 | K562 | blood: | |
20 | chr12:21354085..21355966-chr12:21358587..21360653,2 | K562 | blood: | |
21 | chr12:21193958..21195458-chr17:59872939..59874521,2 | MCF-7 | breast: | |
22 | chr12:21254641..21256921-chr12:21258871..21260640,2 | K562 | blood: | |
23 | chr12:21103010..21104123-chr12:21218514..21219449,3 | MCF-7 | breast: | |
24 | chr12:21373190..21374871-chr12:21381396..21383038,2 | K562 | blood: | |
25 | chr12:21373190..21374871-chr12:21381396..21383038,2 | K562 | blood: | |
26 | chr12:21102918..21103853-chr12:21322562..21323307,3 | MCF-7 | breast: | |
27 | chr12:21099420..21100309-chr12:21218592..21219170,2 | MCF-7 | breast: | |
28 | chr12:21254641..21256921-chr12:21258871..21260640,2 | K562 | blood: | |
29 | chr12:21268556..21269333-chr7:84915114..84915941,2 | MCF-7 | breast: | |
30 | chr12:21367379..21369612-chr12:21376922..21378821,2 | K562 | blood: |
(count:3 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-SLCO1B1-1 | chr12:21228194-21228718 | NONHSAT027240 |
2 | lnc-SLCO1B1-1 | chr12:21220285-21220317 | NONHSAT027240 |
3 | lnc-SLCO1A2-5 | chr12:21083248-21084757 | NONHSAT027238 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000257062 | TF binding region |
SLCO1B1 | TF binding region |
SLCO1B7 | TF binding region |
ENSG00000257062 | CpG island |
SLCO1B1 | CpG island |
SLCO1B7 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs78395236 | chr12:21017612-21017613 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs547554611 | chr12:21017614-21017615 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs570492319 | chr12:21017670-21017671 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs144883144 | chr12:21017672-21017673 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs77854652 | chr12:21017679-21017680 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs115673184 | chr12:21017680-21017681 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs138178122 | chr12:21017681-21017682 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs556126887 | chr12:21017696-21017697 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs567139990 | chr12:21017747-21017748 | Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs2417941 | chr12:21017796-21017797 | Strong transcription Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
11 | rs534949077 | chr12:21017850-21017851 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs369880194 | chr12:21017864-21017865 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs77041891 | chr12:21017870-21017871 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs2417940 | chr12:21017875-21017876 | Strong transcription Weak transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundancedisease |
15 | rs142754510 | chr12:21017888-21017889 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs543856552 | chr12:21017893-21017894 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs563545654 | chr12:21017954-21017955 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs80133659 | chr12:21017975-21017976 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs73069234 | chr12:21018027-21018028 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs538399092 | chr12:21018033-21018034 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs76880107 | chr12:21018046-21018047 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs146075261 | chr12:21018061-21018062 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs148319004 | chr12:21018071-21018072 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs568716723 | chr12:21018078-21018079 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs577175564 | chr12:21018128-21018129 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs1991849 | chr12:21018131-21018132 | Strong transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
27 | rs12304440 | chr12:21018139-21018140 | Strong transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
28 | rs563216786 | chr12:21018156-21018157 | Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs187818501 | chr12:21018280-21018281 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs193223082 | chr12:21018299-21018300 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs9739022 | chr12:21018305-21018306 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs546405419 | chr12:21018307-21018308 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs529070574 | chr12:21018393-21018394 | Strong transcription Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs566424208 | chr12:21018401-21018402 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs7138198 | chr12:21018402-21018403 | Weak transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
36 | rs559479646 | chr12:21018414-21018415 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs540115512 | chr12:21018427-21018428 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs7138316 | chr12:21018467-21018468 | Weak transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
39 | rs59996209 | chr12:21018517-21018518 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs374929442 | chr12:21018536-21018537 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs557058408 | chr12:21018607-21018608 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs150869097 | chr12:21018690-21018691 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs183777372 | chr12:21018757-21018758 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs188787149 | chr12:21018775-21018776 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs559318069 | chr12:21018789-21018790 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs7138939 | chr12:21018802-21018803 | Weak transcription Strong transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
47 | rs7309891 | chr12:21018855-21018856 | Weak transcription Strong transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
48 | rs201441393 | chr12:21018917-21018918 | Weak transcription Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs533180508 | chr12:21018931-21018932 | Weak transcription Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs549696707 | chr12:21018933-21018934 | Weak transcription Strong transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Basal cell lymphoma | 17053054 | CNVD |
Malignant germ cell tumour | 17285132 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Melanoma | 18172304 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Wilms tumour | 21544195 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Breast cancer | 21264507 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 16751803 | CNVD |
Testicular cancer | 18059402 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Seminomas | 18059402 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Lung cancer | 20668451 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Testicular germ cell tumor | 18059402 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
Chronic lymphocytic leukemia | 22228453 | CNVD |
Chronic lymphocytic leukemia | 21670202 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Breast cancer | 21858162 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cancer | 20164919 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Breast cancer | 17133270 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Ependymoma | 18628472 | CNVD |
Leukemia | 18628472 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Breast cancer | 16397240 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Breast cancer | 21364760 | CNVD |
Intracranial aneurysm | 16715129 | CNVD |
Breast cancer | 21509527 | CNVD |
Autism | 22102821 | CNVD |
Follicular lymphoma | 18703704 | CNVD |
Lung cancer | 18438408 | CNVD |
Melanoma | 17363583 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Schizophrenia | 23813976 | CNVD |
Schizophrenia | 21346763 | CNVD |
Breast cancer | 22522925 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Lung cancer | 21911935 | CNVD |
Breast cancer | 22048815 | CNVD |
Malignant peripheral nerve sheath tumor | 19844265 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 16272173 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Heart disease | 21282601 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Lung cancer | 17925434 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
Gastric cancer | 24379144 | CNVD |
Gastric cancer | 19545448 | CNVD |
Lung cancer | 20031968 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung adenocarcinoma | 19826477 | CNVD |
Lung cancer | 19525976 | CNVD |
Lung cancer | 19826477 | CNVD |
Non-small cell lung cancer | 19451690 | CNVD |
Non-small cell lung cancer | 17504988 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Lung cancer | 19671679 | CNVD |
Non-syndromic sensorineural hearing loss | 21987784 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:21006600-21018000 | Weak transcription | A549 | lung |
2 | chr12:21015400-21018400 | Strong transcription | Liver | Liver |
3 | chr12:21017800-21019200 | Enhancers | HUVEC | blood vessel |
4 | chr12:21018000-21018200 | Strong transcription | A549 | lung |
5 | chr12:21018200-21018800 | Weak transcription | A549 | lung |
6 | chr12:21018400-21020800 | Weak transcription | Liver | Liver |
7 | chr12:21018800-21020600 | Strong transcription | A549 | lung |
8 | chr12:21019800-21020000 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
9 | chr12:21020000-21020400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
10 | chr12:21020000-21020600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
11 | chr12:21020600-21021600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
12 | chr12:21020600-21027400 | Weak transcription | A549 | lung |
13 | chr12:21020800-21021200 | Strong transcription | Liver | Liver |
14 | chr12:21020800-21021600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
15 | chr12:21021200-21024600 | Weak transcription | Liver | Liver |
16 | chr12:21021600-21022200 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
17 | chr12:21024600-21026200 | Strong transcription | Liver | Liver |
18 | chr12:21026200-21027800 | Weak transcription | Liver | Liver |
19 | chr12:21027400-21028400 | Strong transcription | A549 | lung |
20 | chr12:21027800-21029600 | Strong transcription | Liver | Liver |
21 | chr12:21028400-21035800 | Weak transcription | A549 | lung |
22 | chr12:21029600-21032400 | Weak transcription | Liver | Liver |
23 | chr12:21032400-21035400 | Strong transcription | Liver | Liver |
24 | chr12:21034000-21034200 | Enhancers | Rectal Smooth Muscle | rectum |
25 | chr12:21034400-21035000 | Enhancers | Stomach Mucosa | stomach |
26 | chr12:21034400-21035600 | Weak transcription | Rectal Smooth Muscle | rectum |
27 | chr12:21035000-21035400 | Weak transcription | Stomach Mucosa | stomach |
28 | chr12:21035400-21036000 | Enhancers | Stomach Mucosa | stomach |
29 | chr12:21035400-21039000 | Weak transcription | Liver | Liver |
30 | chr12:21035600-21036200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
31 | chr12:21035600-21036600 | Enhancers | Rectal Smooth Muscle | rectum |
32 | chr12:21035600-21037800 | Enhancers | Colon Smooth Muscle | Colon |
33 | chr12:21035800-21036600 | Enhancers | Duodenum Smooth Muscle | Duodenum |
34 | chr12:21035800-21037000 | Enhancers | Adipose Nuclei | Adipose |
35 | chr12:21035800-21037600 | Enhancers | HUVEC | blood vessel |
36 | chr12:21035800-21038200 | Enhancers | A549 | lung |
37 | chr12:21038200-21038400 | Flanking Active TSS | A549 | lung |
38 | chr12:21038400-21038800 | Enhancers | A549 | lung |
39 | chr12:21038800-21040600 | Weak transcription | A549 | lung |
40 | chr12:21039000-21040000 | Strong transcription | Liver | Liver |
41 | chr12:21040000-21046600 | Weak transcription | Liver | Liver |
42 | chr12:21044600-21054200 | Weak transcription | A549 | lung |
43 | chr12:21046600-21048400 | Strong transcription | Liver | Liver |
44 | chr12:21048400-21052400 | Weak transcription | Liver | Liver |
45 | chr12:21049800-21050200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
46 | chr12:21051800-21052200 | Weak transcription | Aorta | Aorta |
47 | chr12:21052400-21052600 | Enhancers | Aorta | Aorta |
48 | chr12:21052400-21056000 | Strong transcription | Liver | Liver |
49 | chr12:21054200-21056600 | Strong transcription | A549 | lung |
50 | chr12:21056000-21058200 | ZNF genes & repeats | Liver | Liver |