Variant report

Variant	nsv933807
Chromosome Location	chr13:94187158-94845505
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3149)
CpG islands
(count:1529)
Chromatin interactive
region (count:37)
LncRNA
region (count:24)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3149 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:94844946-94845164	HepG2	liver:	n/a	n/a
2	ARID3A	chr13:94618327-94618960	HepG2	liver:	n/a	n/a
3	ARID3A	chr13:94398289-94398646	HepG2	liver:	n/a	n/a
4	ARID3A	chr13:94427739-94428210	HepG2	liver:	n/a	n/a
5	ARID3A	chr13:94440732-94441069	HepG2	liver:	n/a	n/a
6	ARID3A	chr13:94419098-94420845	HepG2	liver:	n/a	n/a
7	ARID3A	chr13:94619632-94619889	HepG2	liver:	n/a	n/a
8	ARID3A	chr13:94834554-94834696	HepG2	liver:	n/a	n/a
9	ARID3A	chr13:94830965-94831202	HepG2	liver:	n/a	n/a
10	ARID3A	chr13:94833961-94834230	HepG2	liver:	n/a	n/a
11	ARID3A	chr13:94767281-94767594	HepG2	liver:	n/a	n/a
12	ARID3A	chr13:94615608-94616640	HepG2	liver:	n/a	n/a
13	ARID3A	chr13:94680735-94681036	HepG2	liver:	n/a	n/a
14	ARID3A	chr13:94771605-94772265	HepG2	liver:	n/a	n/a
15	ARID3A	chr13:94764603-94764791	HepG2	liver:	n/a	n/a
16	ARID3A	chr13:94659474-94659559	HepG2	liver:	n/a	n/a
17	ATF2	chr13:94796163-94796584	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr13:94637119-94637475	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr13:94796141-94796661	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr13:94446468-94446772	GM12878	blood:	n/a	n/a
21	ATF2	chr13:94449735-94450126	GM12878	blood:	n/a	n/a
22	ATF2	chr13:94446428-94446895	GM12878	blood:	n/a	n/a
23	ATF3	chr13:94211968-94212347	A549	lung:	n/a	n/a
24	ATF3	chr13:94615795-94616433	A549	lung:	n/a	n/a
25	BACH1	chr13:94413180-94413247	K562	blood:	n/a	n/a
26	BATF	chr13:94449721-94450076	GM12878	blood:	n/a	chr13:94449894-94449904 chr13:94449893-94449904
27	BATF	chr13:94446466-94446830	GM12878	blood:	n/a	chr13:94446719-94446729
28	BATF	chr13:94446465-94446802	GM12878	blood:	n/a	chr13:94446719-94446729
29	BATF	chr13:94449790-94450054	GM12878	blood:	n/a	chr13:94449894-94449904 chr13:94449893-94449904
30	BATF	chr13:94499493-94499766	GM12878	blood:	n/a	chr13:94499663-94499674 chr13:94499664-94499674 chr13:94499683-94499693
31	BCL11A	chr13:94499540-94499778	GM12878	blood:	n/a	chr13:94499681-94499690 chr13:94499682-94499691
32	BCL11A	chr13:94637148-94637387	H1-hESC	embryonic stem cell:	n/a	n/a
33	BCL11A	chr13:94204919-94205154	H1-hESC	embryonic stem cell:	n/a	n/a
34	BCL11A	chr13:94446459-94446860	GM12878	blood:	n/a	chr13:94446721-94446730 chr13:94446722-94446731
35	BCL11A	chr13:94796268-94796496	H1-hESC	embryonic stem cell:	n/a	n/a
36	BCL11A	chr13:94796244-94796511	H1-hESC	embryonic stem cell:	n/a	n/a
37	BCL3	chr13:94615710-94616164	A549	lung:	n/a	chr13:94615964-94615973 chr13:94615963-94615972
38	BHLHE40	chr13:94255703-94255719	HepG2	liver:	n/a	n/a
39	BHLHE40	chr13:94615832-94616342	HepG2	liver:	n/a	n/a
40	BHLHE40	chr13:94771564-94772446	HepG2	liver:	n/a	n/a
41	BHLHE40	chr13:94449768-94450066	GM12878	blood:	n/a	n/a
42	BRCA1	chr13:94204886-94204898	H1-hESC	embryonic stem cell:	n/a	n/a
43	BRCA1	chr13:94615878-94616557	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr13:94771592-94772138	HepG2	liver:	n/a	n/a
45	CEBPB	chr13:94312949-94313297	HepG2	liver:	n/a	chr13:94313106-94313117 chr13:94313106-94313119 chr13:94313107-94313118
46	CEBPB	chr13:94459377-94459510	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr13:94680520-94680802	A549	lung:	n/a	chr13:94680650-94680661 chr13:94680649-94680660 chr13:94680651-94680660
48	CEBPB	chr13:94771534-94772204	HepG2	liver:	n/a	chr13:94771901-94771912 chr13:94771900-94771911 chr13:94771902-94771911 chr13:94771900-94771913 chr13:94771900-94771913 chr13:94771826-94771837
49	CEBPB	chr13:94404992-94405296	IMR90	lung:	n/a	chr13:94405151-94405160 chr13:94405149-94405160
50	CEBPB	chr13:94661960-94662306	IMR90	lung:	n/a	n/a

(count:1529 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:94196316-94196366	GM12892	blood:	n/a
2	chr13:94206647-94206697	NHBE	bronchial:	n/a
3	chr13:94764647-94764697	HCPEpiC	choroid plexus:	n/a
4	chr13:94207303-94207353	HRCEpiC	kidney:	n/a
5	chr13:94196316-94196366	GM12892	blood:	n/a
6	chr13:94206647-94206697	NHBE	bronchial:	n/a
7	chr13:94764647-94764697	HCPEpiC	choroid plexus:	n/a
8	chr13:94207303-94207353	HRCEpiC	kidney:	n/a
9	chr13:94420920-94420970	HUVEC	blood vessel:	n/a
10	chr13:94725495-94725545	H1-hESC	embryonic stem cell:	embryo
11	chr13:94214495-94214545	LNCaP	prostate:	n/a
12	chr13:94277811-94277861	HL-60	blood:	n/a
13	chr13:94608837-94608887	BJ	skin:	n/a
14	chr13:94725495-94725545	BE2_C	brain:	n/a
15	chr13:94197318-94197368	NH-A	brain:	n/a
16	chr13:94205636-94205686	Jurkat	blood:	n/a
17	chr13:94205636-94205686	SK-N-MC	brain:	n/a
18	chr13:94277811-94277861	ProgFib	skin:	n/a
19	chr13:94422696-94422746	NH-A	brain:	n/a
20	chr13:94207303-94207353	T-47D	breast:	n/a
21	chr13:94420920-94420970	K562	blood:	n/a
22	chr13:94206647-94206697	CMK	blood:	n/a
23	chr13:94533744-94533794	Caco-2	colon:	n/a
24	chr13:94206647-94206697	AG09319	gingival:	n/a
25	chr13:94277811-94277861	NHBE	bronchial:	n/a
26	chr13:94520094-94520144	ECC-1	luminal epithelium:	n/a
27	chr13:94277811-94277861	H1-hESC	embryonic stem cell:	embryo
28	chr13:94493055-94493105	AG04450	lung:	fetal
29	chr13:94207303-94207353	MCF10A-Er-Src	breast:	n/a
30	chr13:94764647-94764697	NT2-D1	testis:	n/a
31	chr13:94533744-94533794	HPAEpiC	pulmonary alveolar:	n/a
32	chr13:94608837-94608887	PFSK-1	brain:	n/a
33	chr13:94427838-94427888	PANC-1	pancreas:	n/a
34	chr13:94608837-94608887	ECC-1	luminal epithelium:	n/a
35	chr13:94461196-94461246	Hela-S3	cervix:	n/a
36	chr13:94288693-94288743	SK-N-SH	brain:	n/a
37	chr13:94207303-94207353	AG10803	skin:	n/a
38	chr13:94520094-94520144	NT2-D1	testis:	n/a
39	chr13:94500648-94500698	NT2-D1	testis:	n/a
40	chr13:94533744-94533794	PrEC	prostate:	n/a
41	chr13:94533744-94533794	CMK	blood:	n/a
42	chr13:94197318-94197368	SK-N-MC	brain:	n/a
43	chr13:94579135-94579185	NHDF-neo	bronchial:	n/a
44	chr13:94493055-94493105	HPAEpiC	pulmonary alveolar:	n/a
45	chr13:94493055-94493105	HCT-116	colon:	n/a
46	chr13:94420920-94420970	GM12878	blood:	n/a
47	chr13:94427838-94427888	HUVEC	blood vessel:	n/a
48	chr13:94840865-94840915	U87	brain:	n/a
49	chr13:94420920-94420970	HRPEpiC	eye:	n/a
50	chr13:94792894-94792944	BJ	skin:	n/a

(count:37 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr13:94692498..94694844-chr13:95254837..95257495,2	MCF-7	breast:
2	chr13:94618671..94621851-chr13:94622877..94625492,3	MCF-7	breast:
3	chr13:94633594..94634415-chr5:158481393..158482104,2	MCF-7	breast:
4	chr13:94819891..94820392-chr3:108103682..108104182,2	Hela-S3	cervix:
5	chr13:94760843..94762945-chr13:94764814..94766586,2	K562	blood:
6	chr13:94330808..94333643-chr13:94334491..94337168,2	MCF-7	breast:
7	chr13:94806835..94809679-chr13:94815918..94817523,2	MCF-7	breast:
8	chr12:81056174..81056770-chr13:94625989..94626674,2	MCF-7	breast:
9	chr13:94776684..94779420-chr13:94782314..94783872,2	MCF-7	breast:
10	chr13:94398293..94400533-chr13:94400548..94403460,2	MCF-7	breast:
11	chr13:94474323..94476090-chr13:94476129..94477771,2	K562	blood:
12	chr13:92008178..92010162-chr13:94344904..94347693,2	K562	blood:
13	chr13:94714803..94717263-chr13:94722478..94725269,2	MCF-7	breast:
14	chr13:93877752..93880297-chr13:94379903..94382162,2	MCF-7	breast:
15	chr13:94618671..94621851-chr13:94622877..94625492,3	MCF-7	breast:
16	chr13:94398293..94400533-chr13:94400548..94403460,2	MCF-7	breast:
17	chr13:94802761..94804908-chr13:94816627..94818163,2	MCF-7	breast:
18	chr13:94578915..94582055-chr13:94582925..94586434,3	MCF-7	breast:
19	chr13:94578915..94582055-chr13:94582925..94586434,3	MCF-7	breast:
20	chr13:94760843..94762945-chr13:94764814..94766586,2	K562	blood:
21	chr13:94403218..94405199-chr13:94408583..94411196,2	MCF-7	breast:
22	chr13:94802761..94804908-chr13:94816627..94818163,2	MCF-7	breast:
23	chr13:94422038..94423634-chr13:94425606..94427255,2	K562	blood:
24	chr13:93878338..93880546-chr13:94502139..94503788,2	MCF-7	breast:
25	chr13:94661154..94662656-chr13:94694673..94696188,2	MCF-7	breast:
26	chr13:94234119..94234981-chr3:29063764..29064299,2	MCF-7	breast:
27	chr13:94806835..94809679-chr13:94815918..94817523,2	MCF-7	breast:
28	chr13:94330808..94333643-chr13:94334491..94337168,2	MCF-7	breast:
29	chr13:94776684..94779420-chr13:94782314..94783872,2	MCF-7	breast:
30	chr13:94714803..94717263-chr13:94722478..94725269,2	MCF-7	breast:
31	chr13:94422038..94423634-chr13:94425606..94427255,2	K562	blood:
32	chr13:94474323..94476090-chr13:94476129..94477771,2	K562	blood:
33	chr12:123331465..123333467-chr13:94634904..94637688,2	MCF-7	breast:
34	chr13:93900851..93901407-chr13:94501304..94502189,2	MCF-7	breast:
35	chr13:94661154..94662656-chr13:94694673..94696188,2	MCF-7	breast:
36	chr13:93879582..93881413-chr13:94446291..94448789,3	MCF-7	breast:
37	chr13:94403218..94405199-chr13:94408583..94411196,2	MCF-7	breast:

(count:24 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DCT-2	chr13:94839208-94839372	ENSG00000236520.1
2	lnc-DCT-2	chr13:94839160-94839372	ENSG00000236520.2
3	lnc-DCT-3	chr13:94483069-94483208	NONHSAT034714
4	lnc-DCT-2	chr13:94839478-94839627	ENSG00000236520.1
5	lnc-DCT-3	chr13:94488310-94488397	ENSG00000224394.1
6	lnc-DCT-3	chr13:94510696-94510726	NONHSAT034714
7	lnc-DCT-3	chr13:94470933-94471035	NONHSAT034714
8	lnc-DCT-13	chr13:94754352-94754402	NONHSAT034719
9	lnc-DCT-3	chr13:94470677-94471035	ENSG00000224394.1
10	lnc-GPR180-9	chr13:94416883-94417110	uc_355_+
11	lnc-DCT-3	chr13:94509202-94509261	NONHSAT034714
12	lnc-DCT-14	chr13:94416883-94417110	uc_355_-
13	lnc-DCT-2	chr13:94840125-94840245	ENSG00000236520.1
14	lnc-DCT-2	chr13:94840125-94840245	ENSG00000236520.2
15	lnc-DCT-2	chr13:94806447-94806660	ENSG00000236520.1
16	lnc-DCT-3	chr13:94488310-94488397	NONHSAT034714
17	lnc-GPC5-7	chr13:94287787-94288466	NONHSAT034713
18	lnc-DCT-3	chr13:94483069-94483208	ENSG00000224394.1
19	lnc-GPR180-8	chr13:94751210-94761265	predAs_engstrom06_BU158437_1
20	lnc-DCT-3	chr13:94470677-94470844	NONHSAT034714
21	lnc-DCT-2	chr13:94839478-94839627	ENSG00000236520.2
22	lnc-DCT-3	chr13:94508644-94508704	NONHSAT034714
23	lnc-DCT-2	chr13:94806447-94806660	ENSG00000236520.2
24	lnc-DCT-13	chr13:94752706-94753670	NONHSAT034719

No data

Variant related genes	Relation type
RNA5SP35	TF binding region
GPC6-AS1	TF binding region
GPC6-AS2	TF binding region
RNA5SP35	CpG island
GPC6-AS1	CpG island
GPC6-AS2	CpG island
ENSG00000183098	chromatin interactions

Extended variants
information (count: 22894 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:22894 , 50 per page) page: 1 2 3 4 5 6 7 ... 458

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs138653662	chr13:94187187-94187188	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs557095810	chr13:94187207-94187208	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs567336456	chr13:94187233-94187234	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs536880257	chr13:94187278-94187279	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs568994237	chr13:94187349-94187350	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs186022826	chr13:94187357-94187358	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs573625417	chr13:94187421-94187422	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs34220468	chr13:94187478-94187479	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs558942896	chr13:94187490-94187491	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs139515697	chr13:94187505-94187506	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs575595368	chr13:94187539-94187540	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs141783976	chr13:94187554-94187555	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs561064361	chr13:94187566-94187567	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs567321156	chr13:94187570-94187571	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs370854958	chr13:94187578-94187579	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs574578708	chr13:94187592-94187593	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs542442980	chr13:94187593-94187594	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs559121595	chr13:94187627-94187628	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs538076523	chr13:94187637-94187638	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs376186417	chr13:94187649-94187650	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs536764012	chr13:94187663-94187664	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs146247286	chr13:94187675-94187676	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs557347280	chr13:94187678-94187679	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs564986554	chr13:94187727-94187728	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs530544435	chr13:94187781-94187782	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs550578629	chr13:94187792-94187793	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs567396082	chr13:94187833-94187834	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs536348214	chr13:94187906-94187907	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs138288657	chr13:94187911-94187912	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs78303493	chr13:94187936-94187937	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs76051588	chr13:94187939-94187940	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs78771033	chr13:94187940-94187941	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs567062129	chr13:94187949-94187950	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs200687324	chr13:94187954-94187955	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs369006034	chr13:94187955-94187956	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs200537987	chr13:94187956-94187957	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs559221539	chr13:94188002-94188003	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs182374702	chr13:94188020-94188021	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs537885335	chr13:94188021-94188022	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs186123266	chr13:94188060-94188061	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs554523397	chr13:94188067-94188068	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs574640130	chr13:94188090-94188091	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs3858839	chr13:94188119-94188120	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs12856048	chr13:94188150-94188151	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs559334938	chr13:94188193-94188194	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs572997624	chr13:94188243-94188244	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs202007850	chr13:94188285-94188286	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs565218571	chr13:94188323-94188324	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs553637888	chr13:94188344-94188345	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs117018902	chr13:94188345-94188346	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Myoepithelioma	18604193	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	18632612	CNVD
Melanoma	18172304	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Metanephric adenoma	20802469	CNVD
Gastric cancer	17908304	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal cancer	21851588	CNVD
Omodysplasia	19481194	CNVD
Breast cancer	22032731	CNVD
Mantle cell lymphoma	19690137	CNVD
Rhabdomyosarcoma	17210683	CNVD
Breast cancer	21364760	CNVD
Medulloblastoma	19270706	CNVD
Burkitt''s lymphoma	19759907	CNVD
Wilms tumour	21544195	CNVD
Acute myeloid leukemia	19651601	CNVD
Effusion lymphoma	18079361	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21183584	CNVD
Breast cancer	17603634	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thyroid cancer	19087340	CNVD
abortions and stillbirths	19751515	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	22522925	CNVD
Osteosarcoma	21215367	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2685 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:94177600-94188000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr13:94185000-94190400	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr13:94186000-94187200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr13:94186000-94187200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr13:94186200-94187200	Enhancers	Osteobl	bone
6	chr13:94186200-94187600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr13:94186400-94187800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr13:94186400-94187800	Enhancers	Fetal Heart	heart
9	chr13:94186800-94188200	Weak transcription	Psoas Muscle	Psoas
10	chr13:94186800-94197000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr13:94187000-94187200	Enhancers	Colon Smooth Muscle	Colon
12	chr13:94187000-94187800	Enhancers	Ovary	ovary
13	chr13:94187000-94188000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr13:94187000-94191800	Weak transcription	HepG2	liver
15	chr13:94187200-94187800	Weak transcription	Osteobl	bone
16	chr13:94187200-94190400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr13:94187600-94188000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr13:94187600-94188400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr13:94187800-94188000	Enhancers	Osteobl	bone
20	chr13:94187800-94191600	Weak transcription	Ovary	ovary
21	chr13:94188000-94188800	Enhancers	H9 Cell Line	embryonic stem cell
22	chr13:94188200-94188400	Enhancers	Psoas Muscle	Psoas
23	chr13:94190400-94190800	Enhancers	HUES64 Cell Line	embryonic stem cell
24	chr13:94190400-94191000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
25	chr13:94191000-94192000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr13:94191600-94192400	Enhancers	Ovary	ovary
27	chr13:94191800-94192600	Enhancers	HepG2	liver
28	chr13:94192000-94193200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
29	chr13:94192400-94203600	Weak transcription	Ovary	ovary
30	chr13:94192600-94212400	Weak transcription	HepG2	liver
31	chr13:94193000-94193200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr13:94193200-94198800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr13:94196200-94197600	Enhancers	Fetal Brain Male	brain
34	chr13:94196600-94197000	Enhancers	HUES48 Cell Line	embryonic stem cell
35	chr13:94196600-94197200	Enhancers	Cortex derived primary cultured neurospheres	brain
36	chr13:94196600-94197600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr13:94196800-94197400	Enhancers	HUES6 Cell Line	embryonic stem cell
38	chr13:94197000-94197400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr13:94197000-94203800	Weak transcription	HUES48 Cell Line	embryonic stem cell
40	chr13:94197400-94198400	Weak transcription	HUES6 Cell Line	embryonic stem cell
41	chr13:94197400-94201400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr13:94198400-94199200	Enhancers	HUES6 Cell Line	embryonic stem cell
43	chr13:94198800-94200800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr13:94199200-94204200	Weak transcription	HUES6 Cell Line	embryonic stem cell
45	chr13:94199400-94199600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr13:94199800-94200400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr13:94200000-94200400	Enhancers	HSMMtube	muscle
48	chr13:94200000-94200600	Enhancers	HSMM	muscle
49	chr13:94200000-94200600	Enhancers	Osteobl	bone
50	chr13:94200200-94200600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links