No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs371688247 |
chr1:226374385-226374386 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs374813325 |
chr1:226374386-226374387 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs566364351 |
chr1:226374387-226374388 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs200337750 |
chr1:226374389-226374390 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs533746203 |
chr1:226374399-226374400 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs185630727 |
chr1:226374402-226374403 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs151203444 |
chr1:226374407-226374408 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs377567212 |
chr1:226374410-226374411 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs537694201 |
chr1:226374411-226374412 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs555924201 |
chr1:226374442-226374443 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs534310436 |
chr1:226374468-226374469 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs575361963 |
chr1:226374511-226374512 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs539567608 |
chr1:226374521-226374522 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs558200369 |
chr1:226374540-226374541 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs573168001 |
chr1:226374580-226374581 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs540576378 |
chr1:226374587-226374588 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs141330597 |
chr1:226374605-226374606 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs555835265 |
chr1:226374692-226374693 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs115976816 |
chr1:226374696-226374697 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs190502499 |
chr1:226374698-226374699 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs182478461 |
chr1:226374715-226374716 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs377219776 |
chr1:226374754-226374755 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs533534654 |
chr1:226374762-226374763 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs544791300 |
chr1:226374848-226374849 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs563099274 |
chr1:226374883-226374884 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs140271534 |
chr1:226374918-226374919 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs184402904 |
chr1:226374945-226374946 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs548959259 |
chr1:226374958-226374959 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs567257146 |
chr1:226374965-226374966 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs189080945 |
chr1:226374981-226374982 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs567146933 |
chr1:226374990-226374991 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs531480546 |
chr1:226375052-226375053 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs150434034 |
chr1:226375185-226375186 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs571125443 |
chr1:226375194-226375195 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs11803491 |
chr1:226375211-226375212 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs556072627 |
chr1:226375218-226375219 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs557976037 |
chr1:226375222-226375223 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs10799340 |
chr1:226375267-226375268 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
39 |
rs548949146 |
chr1:226375276-226375277 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs533982046 |
chr1:226375281-226375282 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs559998258 |
chr1:226375320-226375321 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs201618414 |
chr1:226375346-226375347 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs200840982 |
chr1:226375356-226375357 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs555779651 |
chr1:226375357-226375358 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs201000388 |
chr1:226375363-226375364 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs111717169 |
chr1:226375364-226375365 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs200429793 |
chr1:226375366-226375367 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs58348746 |
chr1:226375368-226375369 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs12747770 |
chr1:226375369-226375370 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs77101626 |
chr1:226375375-226375376 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|