Variant report

Variant nsv945344
Chromosome Location chr1:227899939-227917776
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:526 , 50 per page) page: 1 2 3 4 5 6 7 ... 11
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227899600-227900400 ZNF genes & repeats GM12878-XiMat blood
2 chr1:227900400-227900800 Enhancers GM12878-XiMat blood
3 chr1:227900800-227901200 ZNF genes & repeats GM12878-XiMat blood
4 chr1:227901200-227901600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:227901400-227901600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:227901600-227907200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:227906200-227906800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:227907000-227907800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
9 chr1:227907000-227908200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
10 chr1:227907200-227908200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:227907600-227908000 ZNF genes & repeats Brain Germinal Matrix brain
12 chr1:227907600-227908000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
13 chr1:227907600-227908200 ZNF genes & repeats Adipose Nuclei Adipose
14 chr1:227907600-227908200 ZNF genes & repeats Brain Substantia Nigra brain
15 chr1:227910400-227911400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:227911200-227911600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:227911400-227915600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:227911800-227912600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:227912200-227913400 Enhancers Fetal Muscle Leg muscle
20 chr1:227912600-227913400 Enhancers HSMMtube muscle
21 chr1:227913400-227915600 Weak transcription HSMMtube muscle
22 chr1:227914400-227915200 ZNF genes & repeats GM12878-XiMat blood
23 chr1:227914600-227915200 Enhancers Hela-S3 cervix
24 chr1:227915000-227915200 Enhancers HepG2 liver
25 chr1:227915000-227915600 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr1:227915000-227915600 Bivalent Enhancer Fetal Muscle Leg muscle
27 chr1:227915000-227915800 Enhancers HMEC breast
28 chr1:227915200-227915400 Flanking Active TSS Hela-S3 cervix
29 chr1:227915200-227915600 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
30 chr1:227915200-227915600 Enhancers Primary B cells from peripheral blood blood
31 chr1:227915200-227915600 Enhancers Primary T helper cells PMA-I stimulated --
32 chr1:227915200-227915600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:227915200-227915600 Enhancers Duodenum Mucosa Duodenum
34 chr1:227915200-227915600 Enhancers Fetal Intestine Large intestine
35 chr1:227915200-227915600 Enhancers Fetal Intestine Small intestine
36 chr1:227915200-227915600 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr1:227915200-227915600 Enhancers Dnd41 blood
38 chr1:227915200-227915600 Enhancers K562 blood
39 chr1:227915200-227915800 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr1:227915200-227915800 Enhancers Placenta Placenta
41 chr1:227915200-227915800 Enhancers Pancreas Pancrea
42 chr1:227915200-227915800 Flanking Active TSS HepG2 liver
43 chr1:227915200-227916000 Flanking Active TSS GM12878-XiMat blood
44 chr1:227915200-227916200 Enhancers Sigmoid Colon Sigmoid Colon
45 chr1:227915400-227915600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:227915400-227915600 Enhancers Primary T cells fromperipheralblood blood
47 chr1:227915400-227915600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr1:227915400-227915600 Enhancers Primary T helper naive cells fromperipheralblood blood
49 chr1:227915400-227915600 Enhancers Primary T helper cells fromperipheralblood blood
50 chr1:227915400-227915600 Enhancers Primary T regulatory cells fromperipheralblood blood

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