Variant report

Variant nsv945353
Chromosome Location chr1:228634866-228638058
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228633200-228635000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
2 chr1:228633400-228635000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
3 chr1:228633600-228635000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
4 chr1:228633600-228635000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
5 chr1:228633800-228635000 Enhancers Fetal Brain Male brain
6 chr1:228633800-228636000 Weak transcription K562 blood
7 chr1:228634000-228643200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:228634200-228635000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:228634200-228641600 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:228634200-228643000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:228634200-228644800 Weak transcription Gastric stomach
12 chr1:228634400-228635000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:228634400-228635000 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:228634400-228638000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:228634400-228641600 Weak transcription Brain Angular Gyrus brain
16 chr1:228634400-228644200 Weak transcription Brain Anterior Caudate brain
17 chr1:228634400-228644600 Weak transcription Right Atrium heart
18 chr1:228634400-228644600 Weak transcription Right Ventricle heart
19 chr1:228634600-228635000 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
20 chr1:228634800-228635000 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
21 chr1:228634800-228635000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:228634800-228635000 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
23 chr1:228634800-228635000 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
24 chr1:228634800-228635000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:228634800-228635000 Enhancers Brain Germinal Matrix brain
26 chr1:228634800-228635200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
27 chr1:228635000-228635200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:228635000-228639800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:228635000-228640200 Weak transcription Fetal Brain Male brain
30 chr1:228635000-228640600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:228635000-228641400 Weak transcription Brain Germinal Matrix brain
32 chr1:228635000-228641600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:228635000-228642000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:228635200-228637200 Enhancers Placenta Placenta
35 chr1:228635200-228643000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:228635200-228644200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:228635400-228639200 Weak transcription Fetal Intestine Small intestine
38 chr1:228635600-228641400 Weak transcription Fetal Brain Female brain
39 chr1:228635800-228643000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:228636000-228638400 Enhancers K562 blood
41 chr1:228636600-228641200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:228637000-228641600 Weak transcription Fetal Muscle Leg muscle
43 chr1:228637200-228640000 Weak transcription Placenta Placenta
44 chr1:228637400-228643000 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr1:228637600-228643400 Weak transcription Brain Hippocampus Middle brain
46 chr1:228638000-228638200 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:228638000-228638200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:228638000-228643000 Weak transcription Breast Myoepithelial Primary Cells Breast

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