Variant report

Variant nsv946005
Chromosome Location chr1:78237708-78244726
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78233400-78238200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:78236000-78241200 Weak transcription Placenta Placenta
3 chr1:78236200-78239600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:78236600-78238400 Enhancers GM12878-XiMat blood
5 chr1:78238200-78238400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:78239200-78239800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:78239600-78240200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:78239600-78240200 Enhancers Esophagus oesophagus
9 chr1:78239600-78245000 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:78239800-78240000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:78239800-78240200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:78240000-78245000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:78240200-78240400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:78240200-78245200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:78240200-78245200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr1:78240400-78245200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:78241200-78242000 Enhancers Placenta Placenta
18 chr1:78241800-78242800 Enhancers HepG2 liver
19 chr1:78242000-78242400 Weak transcription Placenta Placenta
20 chr1:78242200-78242400 Enhancers Small Intestine intestine
21 chr1:78242400-78243000 Enhancers Placenta Placenta
22 chr1:78242800-78244800 Weak transcription HepG2 liver
23 chr1:78243000-78244600 Weak transcription Placenta Placenta
24 chr1:78244400-78244600 Active TSS Brain Anterior Caudate brain
25 chr1:78244400-78244600 Enhancers Dnd41 blood
26 chr1:78244600-78244800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:78244600-78244800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr1:78244600-78244800 Enhancers Primary T helper naive cells from peripheral blood blood
29 chr1:78244600-78244800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr1:78244600-78244800 Enhancers Primary T helper cells PMA-I stimulated --
31 chr1:78244600-78244800 Enhancers Primary T helper cells fromperipheralblood blood
32 chr1:78244600-78244800 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr1:78244600-78244800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:78244600-78244800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:78244600-78244800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:78244600-78244800 Enhancers Muscle Satellite Cultured Cells --
37 chr1:78244600-78244800 Enhancers Adipose Nuclei Adipose
38 chr1:78244600-78244800 Enhancers Skeletal Muscle Female skeletal muscle
39 chr1:78244600-78244800 Weak transcription Small Intestine intestine
40 chr1:78244600-78244800 Enhancers GM12878-XiMat blood
41 chr1:78244600-78244800 Enhancers K562 blood
42 chr1:78244600-78244800 Enhancers Monocytes-CD14+_RO01746 blood
43 chr1:78244600-78244800 Enhancers NHDF-Ad bronchial
44 chr1:78244600-78244800 Enhancers Osteobl bone
45 chr1:78244600-78245000 Enhancers Primary B cells from peripheral blood blood
46 chr1:78244600-78245000 Enhancers Primary T killer naive cells fromperipheralblood blood
47 chr1:78244600-78245000 Flanking Active TSS Brain Anterior Caudate brain
48 chr1:78244600-78245000 Enhancers Placenta Placenta
49 chr1:78244600-78245000 Enhancers HSMM muscle
50 chr1:78244600-78245200 Flanking Active TSS Dnd41 blood

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