No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs547589820 |
chr10:5138058-5138059 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs565767572 |
chr10:5138059-5138060 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs529965760 |
chr10:5138062-5138063 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs548208149 |
chr10:5138064-5138065 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs569586605 |
chr10:5138065-5138066 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs536656589 |
chr10:5138067-5138068 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs561122063 |
chr10:5138069-5138070 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs558178893 |
chr10:5138071-5138072 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs570192015 |
chr10:5138072-5138073 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs536104515 |
chr10:5138073-5138074 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs540396404 |
chr10:5138074-5138075 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs532079348 |
chr10:5138087-5138088 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs534447018 |
chr10:5138088-5138089 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs72774015 |
chr10:5138104-5138105 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
15 |
rs574957930 |
chr10:5138112-5138113 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs558938454 |
chr10:5138193-5138194 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs542464014 |
chr10:5138207-5138208 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs148310014 |
chr10:5138253-5138254 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs190270479 |
chr10:5138271-5138272 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs548449135 |
chr10:5138356-5138357 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs569892901 |
chr10:5138361-5138362 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs564498873 |
chr10:5138363-5138364 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs2801882 |
chr10:5138372-5138373 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs373299522 |
chr10:5138396-5138397 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs559471251 |
chr10:5138428-5138429 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs140602833 |
chr10:5138482-5138483 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs548422759 |
chr10:5138486-5138487 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs569849957 |
chr10:5138490-5138491 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs530743338 |
chr10:5138504-5138505 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs35567055 |
chr10:5138535-5138536 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs570129683 |
chr10:5138537-5138538 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs35174293 |
chr10:5138558-5138559 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs368717761 |
chr10:5138561-5138562 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs371669955 |
chr10:5138563-5138564 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs202122278 |
chr10:5138576-5138577 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs560413182 |
chr10:5138578-5138579 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs377162939 |
chr10:5138581-5138582 |
Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs370092384 |
chr10:5138606-5138607 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs7741 |
chr10:5138607-5138608 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
40 |
rs1804062 |
chr10:5138623-5138624 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs373113927 |
chr10:5138625-5138626 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs1804061 |
chr10:5138634-5138635 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs575984704 |
chr10:5138641-5138642 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs150753542 |
chr10:5138656-5138657 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs546552035 |
chr10:5138657-5138658 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs145911457 |
chr10:5138663-5138664 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs377392226 |
chr10:5138671-5138672 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs139011578 |
chr10:5138672-5138673 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs371976582 |
chr10:5138683-5138684 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs145075384 |
chr10:5138692-5138693 |
Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|