Variant report

Variant	nsv947849
Chromosome Location	chr10:37497091-37510281
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 497 )
Associated
traits (count: 45 )

Variant overlapped rSNPs/rCNVs (count:497 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs565057093	chr10:37497096-37497097	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs541307976	chr10:37497108-37497109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs527830343	chr10:37497134-37497135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs547628988	chr10:37497150-37497151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs148202552	chr10:37497178-37497179	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs373610216	chr10:37497197-37497198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs561213711	chr10:37497205-37497206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs141146282	chr10:37497218-37497219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs574675212	chr10:37497293-37497294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs188021951	chr10:37497342-37497343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs569521649	chr10:37497367-37497368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs369403730	chr10:37497373-37497374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs538643462	chr10:37497376-37497377	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs551944540	chr10:37497454-37497455	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs565783463	chr10:37497484-37497485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs534801116	chr10:37497487-37497488	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs543389394	chr10:37497492-37497493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs574761866	chr10:37497528-37497529	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs536979473	chr10:37497530-37497531	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs557235708	chr10:37497632-37497633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs576327645	chr10:37497690-37497691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs1623321	chr10:37497698-37497699	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs147126594	chr10:37497711-37497712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs190776528	chr10:37497720-37497721	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs541207540	chr10:37497758-37497759	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs184068694	chr10:37497767-37497768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs530334013	chr10:37497790-37497791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs563173463	chr10:37497843-37497844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs138512280	chr10:37497861-37497862	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs188624704	chr10:37497881-37497882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs113681931	chr10:37497887-37497888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs12355970	chr10:37497897-37497898	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs552242360	chr10:37497921-37497922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs545233774	chr10:37497946-37497947	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs565777067	chr10:37497989-37497990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs564933136	chr10:37497999-37498000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs548387462	chr10:37498015-37498016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs568224884	chr10:37498093-37498094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs77768028	chr10:37498105-37498106	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs72787550	chr10:37498174-37498175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs2211067	chr10:37498186-37498187	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs1933748	chr10:37498227-37498228	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs200461264	chr10:37498257-37498258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs538654995	chr10:37498270-37498271	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs543601057	chr10:37498286-37498287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs184427993	chr10:37498310-37498311	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs541093800	chr10:37498332-37498333	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs187448562	chr10:37498335-37498336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs191893557	chr10:37498369-37498370	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs544005215	chr10:37498380-37498381	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:45)

Disease	PMID	Source
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Bethlem myopathy	20302629	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Glioblastoma multiforme	22286061	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hepatocellular carcinoma	16785998	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:37491200-37507600	Weak transcription	A549	lung
2	chr10:37504200-37504600	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr10:37507600-37507800	Enhancers	A549	lung
4	chr10:37507800-37508200	Active TSS	A549	lung
5	chr10:37508200-37508800	Flanking Active TSS	A549	lung
6	chr10:37508800-37513600	Weak transcription	A549	lung

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