Variant report

Variant	nsv947870
Chromosome Location	chr10:42602821-42605063
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 212 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:212 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs113680409	chr10:42602826-42602827	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs4347334	chr10:42602860-42602861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs111387073	chr10:42602875-42602876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs527414692	chr10:42602917-42602918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs142097926	chr10:42602922-42602923	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs547055646	chr10:42602944-42602945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs368253049	chr10:42602951-42602952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs370470869	chr10:42602952-42602953	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs200503170	chr10:42602958-42602959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs567300764	chr10:42602963-42602964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs371796169	chr10:42602966-42602967	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs535738757	chr10:42602971-42602972	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs34223970	chr10:42602975-42602976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs555602369	chr10:42602978-42602979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs71014223	chr10:42602979-42602980	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs376042922	chr10:42602981-42602982	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs569213470	chr10:42602989-42602990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs201722889	chr10:42602998-42602999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs4347335	chr10:42603005-42603006	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs4495851	chr10:42603011-42603012	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs371696239	chr10:42603022-42603023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs4277065	chr10:42603025-42603026	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs538023260	chr10:42603026-42603027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs113622640	chr10:42603040-42603041	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs28405471	chr10:42603042-42603043	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs4500438	chr10:42603051-42603052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs4636611	chr10:42603053-42603054	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs4511243	chr10:42603066-42603067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs4400750	chr10:42603069-42603070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs368371003	chr10:42603071-42603072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs578025016	chr10:42603075-42603076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs540751510	chr10:42603077-42603078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs553869122	chr10:42603078-42603079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs199674315	chr10:42603088-42603089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs573935597	chr10:42603090-42603091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs4511244	chr10:42603106-42603107	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs562742564	chr10:42603107-42603108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs531653167	chr10:42603111-42603112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs536177085	chr10:42603115-42603116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs4570534	chr10:42603129-42603130	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs28435829	chr10:42603146-42603147	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs545206505	chr10:42603174-42603175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs4347336	chr10:42603180-42603181	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs375446001	chr10:42603196-42603197	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs565116479	chr10:42603218-42603219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs527391712	chr10:42603239-42603240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200794927	chr10:42603242-42603243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs567258741	chr10:42603283-42603284	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs373430968	chr10:42603302-42603303	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs4348844	chr10:42603304-42603305	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21509527	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Mental retardation	21062444	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Obesity	20622171	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	22241247	CNVD
Intellectual disability	21811512	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Obesity	21956041	CNVD
Lung cancer	21569311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21785460	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Autism	20531469	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:42600200-42606400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:42602200-42605800	Weak transcription	Monocytes-CD14+_RO01746	blood

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