Variant report

Variant	nsv948130
Chromosome Location	chr10:90694968-90695578
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:307)
CpG islands
(count:61)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:307 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:90694571-90695490	HepG2	liver:	n/a	n/a
2	ATF2	chr10:90694996-90695554	GM12878	blood:	n/a	n/a
3	BCLAF1	chr10:90694507-90695585	GM12878	blood:	n/a	n/a
4	BHLHE40	chr10:90694594-90695576	GM12878	blood:	n/a	n/a
5	BRCA1	chr10:90695054-90695335	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr10:90695021-90695622	A549	lung:	n/a	n/a
7	CEBPB	chr10:90694552-90695638	GM12878	blood:	n/a	n/a
8	CEBPB	chr10:90695125-90695460	A549	lung:	n/a	n/a
9	CEBPB	chr10:90695083-90695497	Hela-S3	cervix:	n/a	n/a
10	CEBPB	chr10:90695125-90695478	HepG2	liver:	n/a	n/a
11	CEBPB	chr10:90695182-90695541	K562	blood:	n/a	n/a
12	CEBPB	chr10:90695142-90695473	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr10:90695111-90695509	IMR90	lung:	n/a	n/a
14	CHD2	chr10:90694634-90695370	Hela-S3	cervix:	n/a	n/a
15	CHD2	chr10:90694694-90695478	GM12878	blood:	n/a	n/a
16	CTCF	chr10:90695220-90695370	HEK293	kidney:	n/a	n/a
17	CTCF	chr10:90694471-90695555	HCT-116	colon:	n/a	n/a
18	CTCF	chr10:90695240-90695390	HRPEpiC	eye:	n/a	n/a
19	CTCF	chr10:90694980-90694983	K562	blood:	n/a	n/a
20	CTCF	chr10:90695220-90695370	GM06990	blood:	n/a	n/a
21	CTCF	chr10:90695220-90695370	HMEC	breast:	n/a	n/a
22	CTCF	chr10:90695220-90695370	HUVEC	blood vessel:	n/a	n/a
23	CTCF	chr10:90695142-90695422	GM19240	blood:	n/a	n/a
24	CTCF	chr10:90695200-90695350	GM12872	blood:	n/a	n/a
25	CTCF	chr10:90694997-90695072	GM10248	blood:	n/a	n/a
26	CTCF	chr10:90694542-90695822	SK-N-SH	brain:	n/a	chr10:90695626-90695635
27	CTCF	chr10:90695240-90695390	GM12865	blood:	n/a	n/a
28	CTCF	chr10:90695220-90695370	AG09319	gingival:	n/a	n/a
29	CTCF	chr10:90694946-90695417	GM12892	blood:	n/a	n/a
30	CTCF	chr10:90694982-90695113	GM12891	blood:	n/a	n/a
31	CTCF	chr10:90695200-90695350	HCT-116	colon:	n/a	n/a
32	CTCF	chr10:90695220-90695370	AG04450	lung:	n/a	n/a
33	CTCF	chr10:90695069-90695457	H1-hESC	embryonic stem cell:	n/a	n/a
34	CTCF	chr10:90695147-90695405	Fibrobl	skin:	n/a	n/a
35	CTCF	chr10:90695220-90695370	GM12864	blood:	n/a	n/a
36	CTCF	chr10:90695220-90695370	HPAF	blood vessel:	n/a	n/a
37	CTCF	chr10:90695240-90695390	BJ	skin:	n/a	n/a
38	CTCF	chr10:90695160-90695310	GM12872	blood:	n/a	n/a
39	CTCF	chr10:90695200-90695350	GM12874	blood:	n/a	n/a
40	CTCF	chr10:90695220-90695370	GM12871	blood:	n/a	n/a
41	CTCF	chr10:90694820-90694970	A549	lung:	n/a	n/a
42	CTCF	chr10:90695164-90695418	LNCaP	prostate:	n/a	n/a
43	CTCF	chr10:90694483-90695531	A549	lung:	n/a	n/a
44	CTCF	chr10:90694386-90695806	HCT-116	colon:	n/a	chr10:90695626-90695635
45	CTCF	chr10:90694551-90695509	K562	blood:	n/a	n/a
46	CTCF	chr10:90695180-90695330	AG04450	lung:	n/a	n/a
47	CTCF	chr10:90695220-90695370	AG04449	skin:	n/a	n/a
48	CTCF	chr10:90695220-90695370	HPF	lung:	n/a	n/a
49	CTCF	chr10:90695157-90695400	ProgFib	skin:	n/a	n/a
50	CTCF	chr10:90695164-90695428	HepG2	liver:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:90695563-90695613	BJ	skin:	n/a
2	chr10:90695563-90695613	SAEC	small airway:	n/a
3	chr10:90695563-90695613	SKMC	muscle:	n/a
4	chr10:90695563-90695613	T-47D	breast:	n/a
5	chr10:90695563-90695613	GM19239	blood:	n/a
6	chr10:90695563-90695613	AG04449	skin:	fetal
7	chr10:90695563-90695613	NHDF-neo	bronchial:	n/a
8	chr10:90695563-90695613	SK-N-SH	brain:	n/a
9	chr10:90695563-90695613	SK-N-MC	brain:	n/a
10	chr10:90695563-90695613	HMEC	breast:	n/a
11	chr10:90695563-90695613	ovcar-3	ovarian:	n/a
12	chr10:90695563-90695613	AG09319	gingival:	n/a
13	chr10:90695563-90695613	NHBE	bronchial:	n/a
14	chr10:90695563-90695613	BE2_C	brain:	n/a
15	chr10:90695563-90695613	Jurkat	blood:	n/a
16	chr10:90695563-90695613	H1-hESC	embryonic stem cell:	embryo
17	chr10:90695563-90695613	RPTEC	kidney:	n/a
18	chr10:90695563-90695613	HUVEC	blood vessel:	n/a
19	chr10:90695563-90695613	A549	lung:	n/a
20	chr10:90695563-90695613	AG09309	skin:	n/a
21	chr10:90695563-90695613	HRCEpiC	kidney:	n/a
22	chr10:90695563-90695613	MCF10A-Er-Src	breast:	n/a
23	chr10:90695563-90695613	HNPCEpiC	eye:	n/a
24	chr10:90695563-90695613	AG10803	skin:	n/a
25	chr10:90695563-90695613	HIPEpiC	eye:	n/a
26	chr10:90695563-90695613	GM12891	blood:	n/a
27	chr10:90695563-90695613	GM06990	blood:	n/a
28	chr10:90695563-90695613	AoSMC	blood vessel:	n/a
29	chr10:90695563-90695613	HRE	kidney:	n/a
30	chr10:90695563-90695613	HL-60	blood:	n/a
31	chr10:90695563-90695613	Hela-S3	cervix:	n/a
32	chr10:90695563-90695613	SK-N-SH_RA	brain:	n/a
33	chr10:90695563-90695613	Caco-2	colon:	n/a
34	chr10:90695563-90695613	Hepatocyte	liver:	n/a
35	chr10:90695563-90695613	NB4	blood:	n/a
36	chr10:90695563-90695613	LNCaP	prostate:	n/a
37	chr10:90695563-90695613	HAEpiC	amniotic membrane:	n/a
38	chr10:90695563-90695613	HEK293	kidney:	embryo
39	chr10:90695563-90695613	ECC-1	luminal epithelium:	n/a
40	chr10:90695563-90695613	MCF-7	breast:	n/a
41	chr10:90695563-90695613	NT2-D1	testis:	n/a
42	chr10:90695563-90695613	HCF	heart:	n/a
43	chr10:90695563-90695613	HCM	heart:	n/a
44	chr10:90695563-90695613	PANC-1	pancreas:	n/a
45	chr10:90695563-90695613	ProgFib	skin:	n/a
46	chr10:90695563-90695613	HCPEpiC	choroid plexus:	n/a
47	chr10:90695563-90695613	CMK	blood:	n/a
48	chr10:90695563-90695613	PrEC	prostate:	n/a
49	chr10:90695563-90695613	GM12878	blood:	n/a
50	chr10:90695563-90695613	NH-A	brain:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:90694072..90695760-chr10:90972688..90973953,5	K562	blood:
2	chr10:90694758..90695380-chr10:90973136..90973942,2	MCF-7	breast:
3	chr10:90694253..90695800-chr10:90745177..90747385,25	MCF-7	breast:
4	chr10:90694766..90695788-chr10:90977194..90977863,3	MCF-7	breast:
5	chr10:90694957..90695602-chr10:90711260..90711824,2	MCF-7	breast:
6	chr10:90694789..90695368-chr10:90747585..90748463,2	MCF-7	breast:
7	chr10:90694469..90695004-chr10:90977172..90978110,2	MCF-7	breast:
8	chr10:90695018..90695761-chr10:90750807..90751680,2	MCF-7	breast:
9	chr10:90693883..90696142-chr10:90743433..90746344,2	MCF-7	breast:
10	chr10:90694289..90695530-chr10:90746407..90747396,8	K562	blood:
11	chr10:90694284..90695841-chr10:90746413..90747615,9	MCF-7	breast:

No data

Variant related genes	Relation type
ACTA2-AS1	TF binding region
ACTA2-AS1	CpG island
ENSG00000026103	chromatin interactions
ENSG00000107796	chromatin interactions

Extended variants
information (count: 32 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs367887292	chr10:90694970-90694971	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs1062399	chr10:90694983-90694984	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs1062398	chr10:90694996-90694997	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs11202904	chr10:90695040-90695041	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs201489517	chr10:90695044-90695045	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs3208386	chr10:90695057-90695058	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs111352790	chr10:90695067-90695068	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs139352781	chr10:90695091-90695092	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs375064015	chr10:90695106-90695107	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs372406288	chr10:90695122-90695123	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs111317533	chr10:90695126-90695127	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs375863298	chr10:90695146-90695147	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs368262366	chr10:90695153-90695154	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs185128929	chr10:90695160-90695161	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs538985736	chr10:90695174-90695175	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs78651566	chr10:90695183-90695184	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs374643433	chr10:90695195-90695196	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs190827603	chr10:90695232-90695233	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs3781212	chr10:90695243-90695244	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs148204227	chr10:90695245-90695246	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs3781211	chr10:90695265-90695266	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs141343503	chr10:90695277-90695278	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs551714685	chr10:90695292-90695293	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs376331458	chr10:90695323-90695324	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs531876145	chr10:90695330-90695331	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs570152382	chr10:90695343-90695344	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs532664217	chr10:90695375-90695376	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs41284106	chr10:90695411-90695412	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs566245731	chr10:90695420-90695421	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs145589141	chr10:90695550-90695551	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs552035823	chr10:90695563-90695564	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs138005969	chr10:90695578-90695579	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Colorectal cancer	19359472	CNVD
Neurocytoma	17123091	CNVD
Prostate cancer	16461572	CNVD
Basal-like breast cancer	18066063	CNVD
Effusion lymphoma	18079361	CNVD
Prostate cancer	21147910	CNVD
Lung cancer	21911935	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	22048815	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Glioblastoma multiforme	19435819	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Sezary syndrome	18413736	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Bipolar disorder	19114987	CNVD
Melanoma	17363583	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:175 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:90655200-90701400	Weak transcription	Gastric	stomach
2	chr10:90660400-90695000	Weak transcription	Fetal Brain Male	brain
3	chr10:90675800-90696400	Weak transcription	Spleen	Spleen
4	chr10:90681400-90697800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr10:90685800-90695000	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr10:90686000-90697600	Weak transcription	Left Ventricle	heart
7	chr10:90686800-90697800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr10:90687000-90695000	Weak transcription	Primary B cells from cord blood	blood
9	chr10:90687400-90695000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr10:90689200-90695000	Weak transcription	Primary T cells from cord blood	blood
11	chr10:90691400-90697800	Weak transcription	Small Intestine	intestine
12	chr10:90692400-90695000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr10:90692400-90695000	Weak transcription	Lung	lung
14	chr10:90692400-90695000	Weak transcription	Ovary	ovary
15	chr10:90692400-90699200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr10:90692400-90711000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr10:90692600-90695000	Weak transcription	Fetal Lung	lung
18	chr10:90693400-90695600	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
19	chr10:90693400-90697200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr10:90693800-90695000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
21	chr10:90693800-90695200	Weak transcription	Fetal Muscle Trunk	muscle
22	chr10:90694600-90695000	Strong transcription	Duodenum Smooth Muscle	Duodenum
23	chr10:90694600-90695000	Strong transcription	Fetal Stomach	stomach
24	chr10:90694600-90695800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr10:90694600-90695800	Enhancers	Fetal Heart	heart
26	chr10:90694600-90707400	Strong transcription	HSMMtube	muscle
27	chr10:90694800-90695000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
28	chr10:90694800-90695000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
29	chr10:90694800-90695000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr10:90694800-90695000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr10:90694800-90695000	Flanking Active TSS	Brain Angular Gyrus	brain
32	chr10:90694800-90695000	Enhancers	Colonic Mucosa	Colon
33	chr10:90694800-90695000	Flanking Active TSS	Fetal Kidney	kidney
34	chr10:90694800-90695000	Genic enhancers	Stomach Smooth Muscle	stomach
35	chr10:90694800-90695000	Enhancers	HMEC	breast
36	chr10:90694800-90695200	Enhancers	ES-I3 Cell Line	embryonic stem cell
37	chr10:90694800-90695200	Enhancers	H1 Cell Line	embryonic stem cell
38	chr10:90694800-90695200	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr10:90694800-90695200	Enhancers	iPS-20b Cell Line	embryonic stem cell
40	chr10:90694800-90695200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr10:90694800-90695200	Genic enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr10:90694800-90695200	Enhancers	Primary hematopoietic stem cells	blood
43	chr10:90694800-90695200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
44	chr10:90694800-90695200	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
45	chr10:90694800-90695200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
46	chr10:90694800-90695200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr10:90694800-90695200	Flanking Active TSS	Adipose Nuclei	Adipose
48	chr10:90694800-90695200	Flanking Active TSS	Liver	Liver
49	chr10:90694800-90695200	Flanking Active TSS	Brain Anterior Caudate	brain
50	chr10:90694800-90695200	Flanking Active TSS	Brain Cingulate Gyrus	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links