Variant report

Variant	nsv948257
Chromosome Location	chr10:37487630-37495018
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 352 )
Associated
traits (count: 44 )

Variant overlapped rSNPs/rCNVs (count:352 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs190457330	chr10:37487646-37487647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs576414937	chr10:37487708-37487709	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs528833345	chr10:37487723-37487724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs546895672	chr10:37487743-37487744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs181456001	chr10:37487754-37487755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs537122509	chr10:37487788-37487789	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs186307189	chr10:37487805-37487806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs1200894	chr10:37487831-37487832	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs539592003	chr10:37487837-37487838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs35627973	chr10:37487875-37487876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs142992596	chr10:37487885-37487886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs573083195	chr10:37487887-37487888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs151113316	chr10:37487917-37487918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs139928183	chr10:37487973-37487974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs574466048	chr10:37488051-37488052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs543428152	chr10:37488197-37488198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs563401984	chr10:37488199-37488200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs576927771	chr10:37488227-37488228	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs375470449	chr10:37488245-37488246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs559739251	chr10:37488246-37488247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs190807998	chr10:37488273-37488274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs551203961	chr10:37488293-37488294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs182659741	chr10:37488432-37488433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs187974945	chr10:37488494-37488495	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs114619602	chr10:37488531-37488532	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs550595016	chr10:37488535-37488536	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs570556871	chr10:37488541-37488542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs535301239	chr10:37488542-37488543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs539199396	chr10:37488587-37488588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs546758507	chr10:37488604-37488605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs566577742	chr10:37488624-37488625	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs535660101	chr10:37488626-37488627	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs201470456	chr10:37488635-37488636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs200378336	chr10:37488636-37488637	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201554478	chr10:37488668-37488669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs373954538	chr10:37488670-37488671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs376338518	chr10:37488674-37488675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs199583754	chr10:37488677-37488678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs200153946	chr10:37488684-37488685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs201396626	chr10:37488687-37488688	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs1209750	chr10:37488689-37488690	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs200532028	chr10:37488691-37488692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs201853144	chr10:37488699-37488700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs199691521	chr10:37488715-37488716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs200645995	chr10:37488722-37488723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs374594847	chr10:37488724-37488725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs201497656	chr10:37488726-37488727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs35278092	chr10:37488740-37488741	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs372438740	chr10:37488752-37488753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs149812500	chr10:37488756-37488757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:44)

Disease	PMID	Source
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Bethlem myopathy	20302629	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Glioblastoma multiforme	22286061	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hepatocellular carcinoma	16785998	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:37479600-37490800	Weak transcription	A549	lung
2	chr10:37490800-37491200	Strong transcription	A549	lung
3	chr10:37491200-37507600	Weak transcription	A549	lung

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