Variant report
Variant | nsv948358 |
---|---|
Chromosome Location | chr6:55351282-55477277 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:55352400-55355200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
2 | chr6:55358000-55358200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
3 | chr6:55358000-55358200 | Enhancers | NHEK | skin |
4 | chr6:55358200-55359200 | Weak transcription | NHEK | skin |
5 | chr6:55358800-55359000 | Bivalent/Poised TSS | Fetal Muscle Trunk | muscle |
6 | chr6:55359000-55359400 | Enhancers | Colon Smooth Muscle | Colon |
7 | chr6:55359000-55360400 | Enhancers | Fetal Lung | lung |
8 | chr6:55359200-55361400 | Enhancers | NHEK | skin |
9 | chr6:55359200-55361600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
10 | chr6:55359800-55361600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
11 | chr6:55359800-55361600 | Enhancers | HMEC | breast |
12 | chr6:55360000-55360400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
13 | chr6:55360400-55361400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
14 | chr6:55360600-55361800 | Enhancers | Muscle Satellite Cultured Cells | -- |
15 | chr6:55361200-55361600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
16 | chr6:55362400-55363000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
17 | chr6:55362400-55363000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
18 | chr6:55362400-55363000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
19 | chr6:55362400-55363000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
20 | chr6:55376400-55399200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
21 | chr6:55376800-55396400 | Weak transcription | Left Ventricle | heart |
22 | chr6:55384200-55384400 | Enhancers | Pancreatic Islets | Pancreatic Islet |
23 | chr6:55384400-55410200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
24 | chr6:55385800-55386200 | Enhancers | Fetal Lung | lung |
25 | chr6:55387400-55388200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
26 | chr6:55389200-55390400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
27 | chr6:55389400-55390400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
28 | chr6:55389400-55390600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
29 | chr6:55393600-55393800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
30 | chr6:55394000-55407200 | Weak transcription | Fetal Muscle Leg | muscle |
31 | chr6:55395800-55396200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
32 | chr6:55396400-55396600 | Enhancers | Left Ventricle | heart |
33 | chr6:55396600-55396800 | Weak transcription | Left Ventricle | heart |
34 | chr6:55399200-55400400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
35 | chr6:55399200-55402400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
36 | chr6:55400400-55418600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
37 | chr6:55400600-55404000 | Weak transcription | Fetal Lung | lung |
38 | chr6:55402400-55402600 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
39 | chr6:55402400-55402600 | Enhancers | Esophagus | oesophagus |
40 | chr6:55404000-55404200 | Strong transcription | Fetal Lung | lung |
41 | chr6:55404200-55404400 | ZNF genes & repeats | Fetal Lung | lung |
42 | chr6:55404400-55407600 | Weak transcription | Fetal Lung | lung |
43 | chr6:55408400-55408800 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
44 | chr6:55410200-55411000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
45 | chr6:55411000-55411400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
46 | chr6:55411400-55412400 | Enhancers | Pancreatic Islets | Pancreatic Islet |
47 | chr6:55412400-55412600 | Flanking Active TSS | Pancreatic Islets | Pancreatic Islet |
48 | chr6:55412600-55413000 | Active TSS | Pancreatic Islets | Pancreatic Islet |
49 | chr6:55413000-55413200 | Flanking Active TSS | Pancreatic Islets | Pancreatic Islet |
50 | chr6:55413200-55413400 | Enhancers | Pancreatic Islets | Pancreatic Islet |