Variant report
Variant | nsv948436 |
---|---|
Chromosome Location | chr8:51115028-51917504 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1616)
- CpG islands (count:673)
- Chromatin interactive region (count:33)
- LncRNA region (count:5)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:51351100-51351279 | HepG2 | liver: | n/a | n/a |
2 | ATF1 | chr8:51210088-51210191 | K562 | blood: | n/a | n/a |
3 | ATF3 | chr8:51310791-51311060 | H1-hESC | embryonic stem cell: | n/a | n/a |
4 | ATF3 | chr8:51310742-51311085 | H1-hESC | embryonic stem cell: | n/a | n/a |
5 | ATF3 | chr8:51310845-51311121 | K562 | blood: | n/a | n/a |
6 | BACH1 | chr8:51322783-51322854 | H1-hESC | embryonic stem cell: | n/a | n/a |
7 | BACH1 | chr8:51380375-51380444 | K562 | blood: | n/a | n/a |
8 | BACH1 | chr8:51360829-51360868 | H1-hESC | embryonic stem cell: | n/a | n/a |
9 | BACH1 | chr8:51204453-51204562 | H1-hESC | embryonic stem cell: | n/a | n/a |
10 | BACH1 | chr8:51760453-51760811 | H1-hESC | embryonic stem cell: | n/a | n/a |
11 | BACH1 | chr8:51760452-51760813 | K562 | blood: | n/a | n/a |
12 | BACH1 | chr8:51549746-51549863 | H1-hESC | embryonic stem cell: | n/a | n/a |
13 | BACH1 | chr8:51448363-51448441 | K562 | blood: | n/a | n/a |
14 | BACH1 | chr8:51622516-51622751 | H1-hESC | embryonic stem cell: | n/a | chr8:51622657-51622671 |
15 | BACH1 | chr8:51551406-51551486 | H1-hESC | embryonic stem cell: | n/a | n/a |
16 | BHLHE40 | chr8:51310826-51311066 | K562 | blood: | n/a | n/a |
17 | BHLHE40 | chr8:51553900-51554065 | GM12878 | blood: | n/a | n/a |
18 | BHLHE40 | chr8:51310789-51311051 | HepG2 | liver: | n/a | n/a |
19 | BRCA1 | chr8:51771806-51771914 | Hela-S3 | cervix: | n/a | n/a |
20 | BRCA1 | chr8:51310893-51310975 | H1-hESC | embryonic stem cell: | n/a | n/a |
21 | CEBPB | chr8:51167269-51167657 | Hela-S3 | cervix: | n/a | chr8:51167453-51167470 |
22 | CEBPB | chr8:51199867-51200122 | H1-hESC | embryonic stem cell: | n/a | chr8:51199988-51199999 |
23 | CEBPB | chr8:51284262-51284449 | A549 | lung: | n/a | n/a |
24 | CEBPB | chr8:51417321-51417664 | Hela-S3 | cervix: | n/a | chr8:51417510-51417521 chr8:51417479-51417490 |
25 | CEBPB | chr8:51576308-51576662 | IMR90 | lung: | n/a | n/a |
26 | CEBPB | chr8:51384894-51385137 | IMR90 | lung: | n/a | n/a |
27 | CEBPB | chr8:51301753-51301900 | K562 | blood: | n/a | chr8:51301857-51301868 |
28 | CEBPB | chr8:51774506-51774533 | H1-hESC | embryonic stem cell: | n/a | n/a |
29 | CEBPB | chr8:51137953-51138297 | IMR90 | lung: | n/a | chr8:51138124-51138135 |
30 | CEBPB | chr8:51755011-51755229 | H1-hESC | embryonic stem cell: | n/a | n/a |
31 | CEBPB | chr8:51755059-51755254 | HepG2 | liver: | n/a | n/a |
32 | CEBPB | chr8:51306294-51306472 | A549 | lung: | n/a | chr8:51306433-51306444 |
33 | CEBPB | chr8:51310815-51311070 | A549 | lung: | n/a | chr8:51310953-51310964 |
34 | CEBPB | chr8:51167319-51167607 | MCF-7 | breast: | n/a | chr8:51167453-51167470 |
35 | CEBPB | chr8:51340892-51341151 | H1-hESC | embryonic stem cell: | n/a | chr8:51341047-51341056 chr8:51341045-51341058 chr8:51341047-51341056 chr8:51341045-51341056 chr8:51341045-51341058 chr8:51341047-51341056 chr8:51341045-51341058 chr8:51341046-51341057 chr8:51341047-51341056 chr8:51341045-51341056 |
36 | CEBPB | chr8:51217230-51217472 | H1-hESC | embryonic stem cell: | n/a | chr8:51217369-51217380 |
37 | CEBPB | chr8:51306357-51306493 | HepG2 | liver: | n/a | chr8:51306433-51306444 |
38 | CEBPB | chr8:51417303-51417661 | K562 | blood: | n/a | chr8:51417510-51417521 chr8:51417479-51417490 |
39 | CEBPB | chr8:51176238-51176491 | A549 | lung: | n/a | chr8:51176300-51176311 |
40 | CEBPB | chr8:51853747-51854039 | IMR90 | lung: | n/a | n/a |
41 | CEBPB | chr8:51320425-51320659 | HepG2 | liver: | n/a | chr8:51320549-51320560 |
42 | CEBPB | chr8:51153154-51153293 | H1-hESC | embryonic stem cell: | n/a | chr8:51153238-51153251 |
43 | CEBPB | chr8:51293479-51293710 | HepG2 | liver: | n/a | n/a |
44 | CEBPB | chr8:51176175-51176483 | IMR90 | lung: | n/a | chr8:51176300-51176311 |
45 | CEBPB | chr8:51463151-51463193 | HepG2 | liver: | n/a | n/a |
46 | CEBPB | chr8:51310785-51311240 | MCF-7 | breast: | n/a | chr8:51310953-51310964 |
47 | CEBPB | chr8:51741406-51741719 | A549 | lung: | n/a | chr8:51741562-51741573 chr8:51741528-51741539 |
48 | CEBPB | chr8:51293521-51293731 | A549 | lung: | n/a | n/a |
49 | CEBPB | chr8:51212701-51212837 | H1-hESC | embryonic stem cell: | n/a | n/a |
50 | CEBPB | chr8:51217189-51217557 | IMR90 | lung: | n/a | chr8:51217369-51217380 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:51555740-51555790 | IMR90 | lung: | fetal |
2 | chr8:51555740-51555790 | HMEC | breast: | n/a |
3 | chr8:51555740-51555790 | IMR90 | lung: | fetal |
4 | chr8:51555740-51555790 | HMEC | breast: | n/a |
5 | chr8:51364244-51364294 | BE2_C | brain: | n/a |
6 | chr8:51576109-51576159 | T-47D | breast: | n/a |
7 | chr8:51404106-51404156 | T-47D | breast: | n/a |
8 | chr8:51199947-51199997 | SK-N-SH_RA | brain: | n/a |
9 | chr8:51555740-51555790 | HL-60 | blood: | n/a |
10 | chr8:51555740-51555790 | NH-A | brain: | n/a |
11 | chr8:51404179-51404229 | AG09309 | skin: | n/a |
12 | chr8:51449266-51449316 | HL-60 | blood: | n/a |
13 | chr8:51404106-51404156 | IMR90 | lung: | fetal |
14 | chr8:51404066-51404116 | AoSMC | blood vessel: | n/a |
15 | chr8:51555740-51555790 | HPAEpiC | pulmonary alveolar: | n/a |
16 | chr8:51449266-51449316 | AG04450 | lung: | fetal |
17 | chr8:51404106-51404156 | ECC-1 | luminal epithelium: | n/a |
18 | chr8:51553739-51553789 | AG04450 | lung: | fetal |
19 | chr8:51576109-51576159 | HNPCEpiC | eye: | n/a |
20 | chr8:51553739-51553789 | HCT-116 | colon: | n/a |
21 | chr8:51364244-51364294 | AG04450 | lung: | fetal |
22 | chr8:51555740-51555790 | H1-hESC | embryonic stem cell: | embryo |
23 | chr8:51528401-51528451 | PrEC | prostate: | n/a |
24 | chr8:51404066-51404116 | U87 | brain: | n/a |
25 | chr8:51404179-51404229 | MCF10A-Er-Src | breast: | n/a |
26 | chr8:51553739-51553789 | H1-hESC | embryonic stem cell: | embryo |
27 | chr8:51364244-51364294 | U87 | brain: | n/a |
28 | chr8:51404179-51404229 | LNCaP | prostate: | n/a |
29 | chr8:51288552-51288602 | SAEC | small airway: | n/a |
30 | chr8:51288552-51288602 | HCT-116 | colon: | n/a |
31 | chr8:51288552-51288602 | CMK | blood: | n/a |
32 | chr8:51576109-51576159 | ovcar-3 | ovarian: | n/a |
33 | chr8:51528401-51528451 | NB4 | blood: | n/a |
34 | chr8:51404179-51404229 | GM06990 | blood: | n/a |
35 | chr8:51288552-51288602 | A549 | lung: | n/a |
36 | chr8:51555740-51555790 | HCM | heart: | n/a |
37 | chr8:51404106-51404156 | HRE | kidney: | n/a |
38 | chr8:51404066-51404116 | GM06990 | blood: | n/a |
39 | chr8:51288552-51288602 | GM06990 | blood: | n/a |
40 | chr8:51404066-51404116 | PANC-1 | pancreas: | n/a |
41 | chr8:51553739-51553789 | NH-A | brain: | n/a |
42 | chr8:51199947-51199997 | Hepatocyte | liver: | n/a |
43 | chr8:51364244-51364294 | HUVEC | blood vessel: | n/a |
44 | chr8:51528401-51528451 | SK-N-MC | brain: | n/a |
45 | chr8:51404066-51404116 | CMK | blood: | n/a |
46 | chr8:51576109-51576159 | AG09319 | gingival: | n/a |
47 | chr8:51199947-51199997 | AG04450 | lung: | fetal |
48 | chr8:51576109-51576159 | NB4 | blood: | n/a |
49 | chr8:51528401-51528451 | HepG2 | liver: | n/a |
50 | chr8:51364244-51364294 | Hepatocyte | liver: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:135846774..135848617-chr8:51481190..51483855,2 | MCF-7 | breast: | |
2 | chr8:51677159..51678716-chr8:51680516..51682123,2 | K562 | blood: | |
3 | chr1:116959143..116962126-chr8:51573809..51576471,2 | MCF-7 | breast: | |
4 | chr8:51219065..51222213-chr8:51225649..51228332,3 | K562 | blood: | |
5 | chr8:51711545..51713227-chr8:51715658..51718026,2 | K562 | blood: | |
6 | chr1:144893909..144894771-chr8:51229590..51230343,2 | MCF-7 | breast: | |
7 | chr8:51700925..51703034-chr8:51706252..51708028,2 | K562 | blood: | |
8 | chr8:51187159..51189399-chr8:51189828..51191872,2 | MCF-7 | breast: | |
9 | chr8:51854395..51855974-chr8:51858657..51860193,2 | K562 | blood: | |
10 | chr8:51194558..51197541-chr8:51202196..51204695,2 | MCF-7 | breast: | |
11 | chr8:51219065..51222213-chr8:51225649..51228332,3 | K562 | blood: | |
12 | chr8:50826287..50827033-chr8:51310198..51311230,3 | MCF-7 | breast: | |
13 | chr8:51590048..51591794-chr8:51592149..51596284,3 | K562 | blood: | |
14 | chr8:51590048..51591794-chr8:51592149..51596284,3 | K562 | blood: | |
15 | chr8:51464363..51466671-chr8:51475999..51477985,2 | K562 | blood: | |
16 | chr8:51372315..51374214-chr8:51375832..51377998,2 | K562 | blood: | |
17 | chr8:51194558..51197541-chr8:51202196..51204695,2 | MCF-7 | breast: | |
18 | chr8:51715941..51718504-chr8:51718568..51721133,2 | K562 | blood: | |
19 | chr8:51372315..51374214-chr8:51375832..51377998,2 | K562 | blood: | |
20 | chr8:51187159..51189399-chr8:51189828..51191872,2 | MCF-7 | breast: | |
21 | chr8:51715941..51718504-chr8:51718568..51721133,2 | K562 | blood: | |
22 | chr8:51767065..51768781-chr8:51770684..51773527,2 | MCF-7 | breast: | |
23 | chr8:49891255..49891972-chr8:51310445..51311051,2 | MCF-7 | breast: | |
24 | chr8:51252100..51253925-chr8:51256216..51258662,2 | MCF-7 | breast: | |
25 | chr8:51252100..51253925-chr8:51256216..51258662,2 | MCF-7 | breast: | |
26 | chr8:50947214..50948091-chr8:51310516..51311364,3 | MCF-7 | breast: | |
27 | chr8:51677159..51678716-chr8:51680516..51682123,2 | K562 | blood: | |
28 | chr13:32746778..32747333-chr8:51314361..51315226,2 | MCF-7 | breast: | |
29 | chr8:50947077..50947745-chr8:51310573..51311162,2 | MCF-7 | breast: | |
30 | chr8:51711545..51713227-chr8:51715658..51718026,2 | K562 | blood: | |
31 | chr8:51700925..51703034-chr8:51706252..51708028,2 | K562 | blood: | |
32 | chr8:51854395..51855974-chr8:51858657..51860193,2 | K562 | blood: | |
33 | chr8:50753724..50754320-chr8:51310816..51311345,2 | MCF-7 | breast: |
(count:5 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-C8orf22-6 | chr8:51293575-51293638 | ENSG00000253849.1 |
2 | lnc-SNTG1-2 | chr8:51772090-51772622 | NONHSAT126530 |
3 | lnc-C8orf22-6 | chr8:51294466-51294835 | ENSG00000253849.1 |
4 | lnc-C8orf22-15 | chr8:51199098-51199413 | NONHSAT126524 |
5 | lnc-PXDNL-4 | chr8:51675020-51675358 | NONHSAT126529 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000254392 | TF binding region |
ENSG00000253340 | TF binding region |
ENSG00000253849 | TF binding region |
CYCSP22 | TF binding region |
SNTG1 | TF binding region |
ENSG00000254392 | CpG island |
ENSG00000253340 | CpG island |
ENSG00000253849 | CpG island |
CYCSP22 | CpG island |
SNTG1 | CpG island |
ENSG00000203865 | chromatin interactions |
ENSG00000253340 | chromatin interactions |
ENSG00000147481 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs7016161 | chr8:51115028-51115029 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
2 | rs7001922 | chr8:51115049-51115050 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
3 | rs573869740 | chr8:51115076-51115077 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs188448999 | chr8:51115162-51115163 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs143645767 | chr8:51115223-51115224 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs543341795 | chr8:51115243-51115244 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs559922270 | chr8:51115260-51115261 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs193228353 | chr8:51115268-51115269 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs577831677 | chr8:51115269-51115270 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs528565369 | chr8:51115295-51115296 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs60509732 | chr8:51115356-51115357 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs538992734 | chr8:51118023-51118024 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs557394206 | chr8:51118025-51118026 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs78997621 | chr8:51118033-51118034 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs536757073 | chr8:51118034-51118035 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs146827760 | chr8:51118046-51118047 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs139599414 | chr8:51118052-51118053 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs183816416 | chr8:51118055-51118056 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs559030689 | chr8:51118068-51118069 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs188753496 | chr8:51118076-51118077 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs543761082 | chr8:51118087-51118088 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs192493557 | chr8:51118098-51118099 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs565290460 | chr8:51118107-51118108 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs142943353 | chr8:51118164-51118165 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs541560175 | chr8:51118185-51118186 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs4873426 | chr8:51121611-51121612 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
27 | rs562343116 | chr8:51121618-51121619 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs4873131 | chr8:51121619-51121620 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
29 | rs548375407 | chr8:51121624-51121625 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs192613864 | chr8:51121633-51121634 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs7835849 | chr8:51121643-51121644 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
32 | rs182603696 | chr8:51121649-51121650 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs571694717 | chr8:51121662-51121663 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs575701046 | chr8:51121667-51121668 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs7817040 | chr8:51121692-51121693 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
36 | rs71511987 | chr8:51121718-51121719 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs551135787 | chr8:51121727-51121728 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs187311153 | chr8:51121743-51121744 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs373291238 | chr8:51121744-51121745 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs569189834 | chr8:51121762-51121763 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
41 | rs536397455 | chr8:51121775-51121776 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs10105597 | chr8:51121786-51121787 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
43 | rs192126964 | chr8:51121790-51121791 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs534252673 | chr8:51121824-51121825 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs574926442 | chr8:51121848-51121849 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
46 | rs558111378 | chr8:51121860-51121861 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs576479342 | chr8:51121863-51121864 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs543897967 | chr8:51121880-51121881 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs562207040 | chr8:51121902-51121903 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs370296652 | chr8:51121903-51121904 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 16751803 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Seminomas | 18059402 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Developmental delay | 21373258 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Breast cancer | 17603634 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Testicular cancer | 18059402 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Breast cancer | 21509527 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21858162 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Cancer | 20164919 | CNVD |
primary effusion lymphomas | 17116491 | CNVD |
Esophageal cancer | 20955586 | CNVD |
abnormal development | 18461090 | CNVD |
Cancer | 20164920 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Oral cancer | 21386901 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Langer-Giedion syndrome | 22283845 | CNVD |
Cancer | 21637783 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Breast cancer | 20632083 | CNVD |
Breast cancer | 19602461 | CNVD |
Cancer | 22429812 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Oral cancer | 19627613 | CNVD |
Prostate cancer | 21088497 | CNVD |
colon cancer | 17210682 | CNVD |
Breast cancer | 21264507 | CNVD |
Breast cancer | 22028636 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Gastric cancer | 17167181 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Breast cancer | 16461572 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
head and neck squamous cell carcinoma | 18028549 | CNVD |
Breast cancer | 17001317 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Prostate cancer | 16461572 | CNVD |
Breast cancer | 16608533 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Hepatocellular carcinoma | 18803288 | CNVD |
Melanoma | 17363583 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 18628472 | CNVD |
Sezary syndrome | 18413736 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18316590 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Glioma | 20126413 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Type 1 diabetes | 21085585 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
22q11 deletion syndrome | 20357662 | CNVD |
Medulloblastoma | 21163964 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:51114800-51115400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
2 | chr8:51118000-51118200 | Enhancers | Pancreatic Islets | Pancreatic Islet |
3 | chr8:51121600-51122200 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
4 | chr8:51122200-51124800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
5 | chr8:51124000-51125800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
6 | chr8:51124800-51125800 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
7 | chr8:51124800-51126000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
8 | chr8:51125000-51125400 | Enhancers | Fetal Brain Female | brain |
9 | chr8:51125000-51125600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
10 | chr8:51125000-51125600 | Enhancers | Brain Anterior Caudate | brain |
11 | chr8:51125000-51125800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
12 | chr8:51125000-51125800 | Enhancers | Brain Germinal Matrix | brain |
13 | chr8:51125000-51126000 | Enhancers | Osteobl | bone |
14 | chr8:51125400-51125800 | Enhancers | Fetal Lung | lung |
15 | chr8:51125800-51127200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
16 | chr8:51127200-51127400 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
17 | chr8:51127400-51127600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
18 | chr8:51134400-51135200 | ZNF genes & repeats | Liver | Liver |
19 | chr8:51142000-51143200 | Enhancers | Liver | Liver |
20 | chr8:51153200-51153800 | Active TSS | Liver | Liver |
21 | chr8:51153800-51154600 | Flanking Active TSS | Liver | Liver |
22 | chr8:51154600-51155000 | Enhancers | Liver | Liver |
23 | chr8:51156600-51156800 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
24 | chr8:51156800-51161400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
25 | chr8:51160200-51167200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
26 | chr8:51161400-51162400 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
27 | chr8:51161600-51162000 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
28 | chr8:51161800-51162200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
29 | chr8:51161800-51162200 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
30 | chr8:51170000-51170800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
31 | chr8:51172400-51173200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
32 | chr8:51172800-51173200 | Active TSS | Fetal Heart | heart |
33 | chr8:51192200-51192800 | Enhancers | Liver | Liver |
34 | chr8:51192200-51194200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
35 | chr8:51193600-51195000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
36 | chr8:51194200-51194400 | Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
37 | chr8:51198600-51200600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
38 | chr8:51198800-51199200 | Enhancers | H9 Cell Line | embryonic stem cell |
39 | chr8:51198800-51199400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
40 | chr8:51198800-51200000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
41 | chr8:51198800-51200200 | Enhancers | HUES6 Cell Line | embryonic stem cell |
42 | chr8:51198800-51200400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
43 | chr8:51199000-51199200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
44 | chr8:51199200-51200000 | Weak transcription | H9 Cell Line | embryonic stem cell |
45 | chr8:51199200-51200800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
46 | chr8:51199400-51199800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
47 | chr8:51199400-51200400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
48 | chr8:51199600-51200400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
49 | chr8:51199800-51200200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
50 | chr8:51199800-51200200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |