Variant report
Variant | nsv949472 |
---|---|
Chromosome Location | chr2:35709203-36447481 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1785)
- CpG islands (count:307)
- Chromatin interactive region (count:35)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr2:36392370-36392619 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr2:36214717-36214956 | HepG2 | liver: | n/a | n/a |
3 | ATF2 | chr2:36374728-36375202 | GM12878 | blood: | n/a | n/a |
4 | BACH1 | chr2:36417402-36417520 | H1-hESC | embryonic stem cell: | n/a | n/a |
5 | BACH1 | chr2:36180017-36180019 | H1-hESC | embryonic stem cell: | n/a | n/a |
6 | BACH1 | chr2:36246312-36246349 | H1-hESC | embryonic stem cell: | n/a | n/a |
7 | BACH1 | chr2:36163349-36163414 | K562 | blood: | n/a | n/a |
8 | BATF | chr2:36374889-36375165 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr2:36374886-36375226 | GM12878 | blood: | n/a | n/a |
10 | BCL11A | chr2:36374942-36375184 | GM12878 | blood: | n/a | chr2:36374970-36374979 |
11 | BHLHE40 | chr2:36411001-36411307 | HepG2 | liver: | n/a | n/a |
12 | BHLHE40 | chr2:36115733-36115738 | GM12878 | blood: | n/a | n/a |
13 | BHLHE40 | chr2:36214674-36215098 | HepG2 | liver: | n/a | n/a |
14 | BRCA1 | chr2:36285622-36285667 | Hela-S3 | cervix: | n/a | n/a |
15 | BRCA1 | chr2:36214839-36214902 | HepG2 | liver: | n/a | n/a |
16 | CCNT2 | chr2:36229329-36229487 | K562 | blood: | n/a | n/a |
17 | CEBPB | chr2:36195265-36195307 | K562 | blood: | n/a | chr2:36195276-36195287 |
18 | CEBPB | chr2:35721097-35721423 | HepG2 | liver: | n/a | chr2:35721266-35721283 |
19 | CEBPB | chr2:35939874-35940327 | HepG2 | liver: | n/a | n/a |
20 | CEBPB | chr2:35966667-35966899 | IMR90 | lung: | n/a | n/a |
21 | CEBPB | chr2:36195210-36195394 | IMR90 | lung: | n/a | chr2:36195276-36195287 |
22 | CEBPB | chr2:36108892-36109092 | Hela-S3 | cervix: | n/a | chr2:36108992-36109003 |
23 | CEBPB | chr2:35748850-35749215 | HepG2 | liver: | n/a | chr2:35749027-35749038 |
24 | CEBPB | chr2:36214584-36214999 | H1-hESC | embryonic stem cell: | n/a | chr2:36214741-36214754 chr2:36214741-36214754 chr2:36214741-36214752 |
25 | CEBPB | chr2:36379331-36379617 | A549 | lung: | n/a | chr2:36379457-36379468 |
26 | CEBPB | chr2:36355084-36355143 | H1-hESC | embryonic stem cell: | n/a | n/a |
27 | CEBPB | chr2:35939980-35940327 | K562 | blood: | n/a | n/a |
28 | CEBPB | chr2:36214715-36214817 | A549 | lung: | n/a | chr2:36214741-36214754 chr2:36214741-36214754 chr2:36214741-36214752 |
29 | CEBPB | chr2:36106593-36106880 | H1-hESC | embryonic stem cell: | n/a | n/a |
30 | CEBPB | chr2:36420124-36420491 | ECC-1 | luminal epithelium: | n/a | chr2:36420312-36420325 |
31 | CEBPB | chr2:36305807-36305895 | HepG2 | liver: | n/a | chr2:36305858-36305869 |
32 | CEBPB | chr2:36012772-36012798 | HepG2 | liver: | n/a | n/a |
33 | CEBPB | chr2:36420172-36420519 | ECC-1 | luminal epithelium: | n/a | chr2:36420312-36420325 |
34 | CEBPB | chr2:36000765-36000949 | A549 | lung: | n/a | chr2:36000859-36000870 chr2:36000860-36000871 |
35 | CEBPB | chr2:35931148-35931461 | HepG2 | liver: | n/a | chr2:35931306-35931319 chr2:35931306-35931317 |
36 | CEBPB | chr2:35720194-35720493 | MCF-7 | breast: | n/a | n/a |
37 | CEBPB | chr2:36214535-36214977 | HepG2 | liver: | n/a | chr2:36214741-36214754 chr2:36214741-36214754 chr2:36214741-36214752 |
38 | CEBPB | chr2:36436903-36436987 | HepG2 | liver: | n/a | n/a |
39 | CEBPB | chr2:36214566-36214940 | HepG2 | liver: | n/a | chr2:36214741-36214754 chr2:36214741-36214754 chr2:36214741-36214752 |
40 | CEBPB | chr2:35735382-35735623 | HepG2 | liver: | n/a | n/a |
41 | CEBPB | chr2:35858453-35858678 | HepG2 | liver: | n/a | chr2:35858500-35858513 chr2:35858550-35858561 chr2:35858501-35858512 |
42 | CEBPB | chr2:35719522-35719843 | Hela-S3 | cervix: | n/a | chr2:35719704-35719715 chr2:35719702-35719715 chr2:35719702-35719715 |
43 | CEBPB | chr2:35734480-35734730 | A549 | lung: | n/a | chr2:35734589-35734600 |
44 | CEBPB | chr2:35721104-35721408 | A549 | lung: | n/a | chr2:35721266-35721283 |
45 | CEBPB | chr2:35725780-35725965 | HepG2 | liver: | n/a | chr2:35725883-35725894 |
46 | CEBPB | chr2:35931181-35931345 | H1-hESC | embryonic stem cell: | n/a | chr2:35931306-35931319 chr2:35931306-35931317 |
47 | CEBPB | chr2:36044031-36044069 | HepG2 | liver: | n/a | chr2:36044042-36044055 chr2:36044042-36044055 |
48 | CEBPB | chr2:36158170-36158415 | IMR90 | lung: | n/a | n/a |
49 | CEBPB | chr2:36195167-36195440 | HepG2 | liver: | n/a | chr2:36195276-36195287 |
50 | CEBPB | chr2:36214637-36214840 | HepG2 | liver: | n/a | chr2:36214741-36214754 chr2:36214741-36214754 chr2:36214741-36214752 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:36018275-36018325 | NB4 | blood: | n/a |
2 | chr2:36157995-36158045 | MCF10A-Er-Src | breast: | n/a |
3 | chr2:36018275-36018325 | NB4 | blood: | n/a |
4 | chr2:36157995-36158045 | MCF10A-Er-Src | breast: | n/a |
5 | chr2:36049853-36049903 | HRCEpiC | kidney: | n/a |
6 | chr2:36018275-36018325 | H1-hESC | embryonic stem cell: | embryo |
7 | chr2:36018275-36018325 | MCF10A-Er-Src | breast: | n/a |
8 | chr2:36018275-36018325 | HEEpiC | esophagus: | n/a |
9 | chr2:36406592-36406642 | PrEC | prostate: | n/a |
10 | chr2:36406592-36406642 | Caco-2 | colon: | n/a |
11 | chr2:36441749-36441799 | Hela-S3 | cervix: | n/a |
12 | chr2:36018275-36018325 | A549 | lung: | n/a |
13 | chr2:36406592-36406642 | T-47D | breast: | n/a |
14 | chr2:36406592-36406642 | AG04450 | lung: | fetal |
15 | chr2:36018275-36018325 | NHBE | bronchial: | n/a |
16 | chr2:36049853-36049903 | SK-N-MC | brain: | n/a |
17 | chr2:36157995-36158045 | AG04450 | lung: | fetal |
18 | chr2:36441749-36441799 | SAEC | small airway: | n/a |
19 | chr2:36049853-36049903 | Hela-S3 | cervix: | n/a |
20 | chr2:36441749-36441799 | SK-N-SH | brain: | n/a |
21 | chr2:36157995-36158045 | H1-hESC | embryonic stem cell: | embryo |
22 | chr2:36049853-36049903 | U87 | brain: | n/a |
23 | chr2:36018275-36018325 | Caco-2 | colon: | n/a |
24 | chr2:36049853-36049903 | AG04450 | lung: | fetal |
25 | chr2:36157995-36158045 | K562 | blood: | n/a |
26 | chr2:36406592-36406642 | SAEC | small airway: | n/a |
27 | chr2:36018275-36018325 | HCF | heart: | n/a |
28 | chr2:36406592-36406642 | HCPEpiC | choroid plexus: | n/a |
29 | chr2:36441749-36441799 | AG10803 | skin: | n/a |
30 | chr2:36018275-36018325 | HNPCEpiC | eye: | n/a |
31 | chr2:36157995-36158045 | HAEpiC | amniotic membrane: | n/a |
32 | chr2:36441749-36441799 | SK-N-MC | brain: | n/a |
33 | chr2:36441749-36441799 | Hepatocyte | liver: | n/a |
34 | chr2:36157995-36158045 | GM12891 | blood: | n/a |
35 | chr2:36049853-36049903 | ECC-1 | luminal epithelium: | n/a |
36 | chr2:36406592-36406642 | HRPEpiC | eye: | n/a |
37 | chr2:36441749-36441799 | IMR90 | lung: | fetal |
38 | chr2:36049853-36049903 | T-47D | breast: | n/a |
39 | chr2:36406592-36406642 | Hela-S3 | cervix: | n/a |
40 | chr2:36441749-36441799 | H1-hESC | embryonic stem cell: | embryo |
41 | chr2:36441749-36441799 | GM06990 | blood: | n/a |
42 | chr2:36157995-36158045 | GM12892 | blood: | n/a |
43 | chr2:36157995-36158045 | AG09309 | skin: | n/a |
44 | chr2:36441749-36441799 | HRPEpiC | eye: | n/a |
45 | chr2:36157995-36158045 | SK-N-MC | brain: | n/a |
46 | chr2:36157995-36158045 | Jurkat | blood: | n/a |
47 | chr2:36441749-36441799 | PFSK-1 | brain: | n/a |
48 | chr2:36406592-36406642 | SK-N-SH_RA | brain: | n/a |
49 | chr2:36049853-36049903 | HEEpiC | esophagus: | n/a |
50 | chr2:36406592-36406642 | CMK | blood: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:36262623..36264860-chr2:36265182..36267594,2 | K562 | blood: | |
2 | chr14:33621149..33624012-chr2:35726795..35729641,2 | MCF-7 | breast: | |
3 | chr2:36346980..36349018-chr2:36352266..36354440,2 | K562 | blood: | |
4 | chr2:36167966..36170859-chr2:36172337..36174849,2 | MCF-7 | breast: | |
5 | chr2:35847208..35849274-chr2:35852737..35854636,2 | K562 | blood: | |
6 | chr2:35847208..35849274-chr2:35852737..35854636,2 | K562 | blood: | |
7 | chr2:35863760..35866047-chr2:35869717..35871925,2 | MCF-7 | breast: | |
8 | chr2:35887668..35890004-chr2:35892119..35894663,2 | K562 | blood: | |
9 | chr2:35877173..35880679-chr2:35885712..35889508,3 | MCF-7 | breast: | |
10 | chr2:35949877..35953265-chr2:35954228..35956588,3 | MCF-7 | breast: | |
11 | chr2:35887668..35890004-chr2:35892119..35894663,2 | K562 | blood: | |
12 | chr2:36375898..36378508-chr2:36382841..36384658,2 | K562 | blood: | |
13 | chr2:36026668..36029472-chr2:36034547..36037398,2 | K562 | blood: | |
14 | chr2:36243496..36245168-chr2:36248339..36251225,2 | K562 | blood: | |
15 | chr2:35721064..35722615-chr2:35725696..35727810,2 | MCF-7 | breast: | |
16 | chr2:36026668..36029472-chr2:36034547..36037398,2 | K562 | blood: | |
17 | chr2:36198095..36199022-chr2:36584804..36585700,2 | MCF-7 | breast: | |
18 | chr2:35863760..35866047-chr2:35869717..35871925,2 | MCF-7 | breast: | |
19 | chr2:36208827..36211193-chr2:36213089..36216018,2 | MCF-7 | breast: | |
20 | chr2:36426823..36429485-chr2:36432838..36434351,2 | MCF-7 | breast: | |
21 | chr2:36426823..36429485-chr2:36432838..36434351,2 | MCF-7 | breast: | |
22 | chr2:36243496..36245168-chr2:36248339..36251225,2 | K562 | blood: | |
23 | chr2:36208827..36211193-chr2:36213089..36216018,2 | MCF-7 | breast: | |
24 | chr2:36346980..36349018-chr2:36352266..36354440,2 | K562 | blood: | |
25 | chr2:35878984..35880554-chr2:35880811..35883619,2 | K562 | blood: | |
26 | chr2:36099243..36100067-chr2:36734209..36735134,2 | MCF-7 | breast: | |
27 | chr2:35721064..35722615-chr2:35725696..35727810,2 | MCF-7 | breast: | |
28 | chr2:35694136..35697118-chr2:35710618..35713142,3 | MCF-7 | breast: | |
29 | chr2:36222475..36223224-chr6:31509383..31509944,2 | MCF-7 | breast: | |
30 | chr2:36167966..36170859-chr2:36172337..36174849,2 | MCF-7 | breast: | |
31 | chr2:35877173..35880679-chr2:35885712..35889508,3 | MCF-7 | breast: | |
32 | chr2:36375898..36378508-chr2:36382841..36384658,2 | K562 | blood: | |
33 | chr2:35878984..35880554-chr2:35880811..35883619,2 | K562 | blood: | |
34 | chr2:36198079..36198752-chr2:36549195..36549978,3 | MCF-7 | breast: | |
35 | chr2:36262623..36264860-chr2:36265182..36267594,2 | K562 | blood: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AC007401.2.1-6 | chr2:35949825-35950208 | NONHSAT070075 |
No data |
No data |
Variant related genes | Relation type |
---|---|
MRPL50P1 | TF binding region |
MRPL50P1 | CpG island |
ENSG00000229013 | chromatin interactions |
ENSG00000265301 | chromatin interactions |
ENSG00000207255 | chromatin interactions |
ENSG00000234587 | chromatin interactions |
ENSG00000198563 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs539879976 | chr2:35710623-35710624 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
2 | rs538037021 | chr2:35710632-35710633 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
3 | rs185904791 | chr2:35710646-35710647 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
4 | rs577827155 | chr2:35710648-35710649 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
5 | rs11124443 | chr2:35710649-35710650 | Inactive region | Chromatin interactive region | 3 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
6 | rs17016746 | chr2:35710661-35710662 | Inactive region | Chromatin interactive region | 3 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
7 | rs548233453 | chr2:35710667-35710668 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
8 | rs191149790 | chr2:35710701-35710702 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
9 | rs542196599 | chr2:35710717-35710718 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
10 | rs183361694 | chr2:35710751-35710752 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
11 | rs575484472 | chr2:35710798-35710799 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
12 | rs77612735 | chr2:35710886-35710887 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
13 | rs17016750 | chr2:35710894-35710895 | Inactive region | Chromatin interactive region | 3 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
14 | rs556221290 | chr2:35710944-35710945 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
15 | rs17016754 | chr2:35710967-35710968 | Inactive region | Chromatin interactive region | 3 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
16 | rs11675547 | chr2:35710969-35710970 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
17 | rs560321707 | chr2:35711029-35711030 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
18 | rs529279090 | chr2:35711058-35711059 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
19 | rs540113976 | chr2:35711117-35711118 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
20 | rs35971369 | chr2:35711136-35711137 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
21 | rs190484009 | chr2:35711150-35711151 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
22 | rs113360129 | chr2:35711182-35711183 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
23 | rs569137857 | chr2:35711193-35711194 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
24 | rs538098292 | chr2:35711194-35711195 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
25 | rs138389803 | chr2:35711207-35711208 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
26 | rs571443319 | chr2:35711227-35711228 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
27 | rs533909394 | chr2:35711255-35711256 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
28 | rs553821268 | chr2:35711277-35711278 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
29 | rs573599896 | chr2:35711296-35711297 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
30 | rs536244833 | chr2:35711355-35711356 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
31 | rs112184914 | chr2:35711358-35711359 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
32 | rs575545965 | chr2:35711376-35711377 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
33 | rs572020655 | chr2:35711418-35711419 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
34 | rs544477557 | chr2:35711431-35711432 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
35 | rs557960488 | chr2:35711468-35711469 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
36 | rs536374722 | chr2:35711470-35711471 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
37 | rs62143561 | chr2:35711471-35711472 | Inactive region | Chromatin interactive region | 3 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
38 | rs112973481 | chr2:35711492-35711493 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
39 | rs374212466 | chr2:35711496-35711497 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
40 | rs560632811 | chr2:35711507-35711508 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
41 | rs529324865 | chr2:35711513-35711514 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
42 | rs188148223 | chr2:35711517-35711518 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
43 | rs192733999 | chr2:35711546-35711547 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
44 | rs140738763 | chr2:35711551-35711552 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
45 | rs149776867 | chr2:35711563-35711564 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
46 | rs58358221 | chr2:35711566-35711567 | Inactive region | Chromatin interactive region | 3 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
47 | rs571508241 | chr2:35711567-35711568 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
48 | rs183404763 | chr2:35711568-35711569 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
49 | rs547225837 | chr2:35711586-35711587 | Inactive region | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
50 | rs567362693 | chr2:35711609-35711610 | ZNF genes & repeats | Chromatin interactive region | 3 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Breast cancer | 17393978 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Breast cancer | 17603634 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Lynch syndrome | 18415027 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Diffuse large b-cell lymphoma | 18287131 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Adrenal tumor | 17535989 | CNVD |
Breast cancer | 21264507 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Medulloblastoma | 17522785 | CNVD |
Cancer | 23418310 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Ependymoma | 16718352 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Prostate cancer | 18632612 | CNVD |
Bladder cancer | 21909424 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Intellectual disability | 22102821 | CNVD |
Cancer | 20164919 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Autism | 17483303 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Esophageal adenocarcinoma | 18519675 | CNVD |
Medulloblastoma | 20607354 | CNVD |
Leukemia | 18628472 | CNVD |
Autism | 19521722 | CNVD |
Autism | 18522746 | CNVD |
Breast cancer | 21364760 | CNVD |
Wilms tumour | 21544195 | CNVD |
Non-small cell lung cancer | 18927303 | CNVD |
Hereditary gingival fibromatosis | 19633868 | CNVD |
Breast cancer | 21785460 | CNVD |
Lung cancer | 18438408 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 21045282 | CNVD |
Prostate cancer | 21965145 | CNVD |
Breast cancer | 16397240 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21508638 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Neurocytoma | 17123091 | CNVD |
Autism | 22495309 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Breast cancer | 22522925 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Melanoma | 18172304 | CNVD |
Cancer | 16751803 | CNVD |
Medulloblastoma | 21163964 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:35711600-35711800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
2 | chr2:35720200-35720600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
3 | chr2:35720200-35721000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
4 | chr2:35720200-35721000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
5 | chr2:35720200-35721000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
6 | chr2:35720200-35721000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
7 | chr2:35720200-35721000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
8 | chr2:35720200-35721200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
9 | chr2:35725800-35728000 | Enhancers | HUVEC | blood vessel |
10 | chr2:35726000-35727000 | Enhancers | HMEC | breast |
11 | chr2:35726000-35727200 | Enhancers | Hela-S3 | cervix |
12 | chr2:35727000-35728200 | Weak transcription | HMEC | breast |
13 | chr2:35727200-35728400 | Weak transcription | Hela-S3 | cervix |
14 | chr2:35727600-35728800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
15 | chr2:35728000-35728800 | Flanking Active TSS | HUVEC | blood vessel |
16 | chr2:35728000-35730000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
17 | chr2:35728200-35730400 | Enhancers | HMEC | breast |
18 | chr2:35728400-35729800 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
19 | chr2:35728400-35729800 | Enhancers | Hela-S3 | cervix |
20 | chr2:35728600-35729800 | Enhancers | NHEK | skin |
21 | chr2:35728800-35729200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
22 | chr2:35728800-35729200 | Enhancers | HUVEC | blood vessel |
23 | chr2:35729200-35729400 | Flanking Active TSS | HUVEC | blood vessel |
24 | chr2:35729200-35730400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
25 | chr2:35729400-35730400 | Enhancers | HUVEC | blood vessel |
26 | chr2:35730400-35733600 | Weak transcription | HUVEC | blood vessel |
27 | chr2:35730400-35735600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
28 | chr2:35730400-35735600 | Weak transcription | HMEC | breast |
29 | chr2:35733600-35735600 | Enhancers | HUVEC | blood vessel |
30 | chr2:35735600-35736200 | Flanking Active TSS | HUVEC | blood vessel |
31 | chr2:35735600-35736400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
32 | chr2:35735600-35736400 | Enhancers | HMEC | breast |
33 | chr2:35735800-35736200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
34 | chr2:35735800-35736200 | Enhancers | Adipose Nuclei | Adipose |
35 | chr2:35735800-35736400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
36 | chr2:35736200-35736800 | Enhancers | HUVEC | blood vessel |
37 | chr2:35736400-35739800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
38 | chr2:35739800-35740200 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
39 | chr2:35741000-35743000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
40 | chr2:35743000-35743800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
41 | chr2:35743800-35747600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
42 | chr2:35743800-35754600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
43 | chr2:35747000-35748000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
44 | chr2:35747000-35748200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
45 | chr2:35747000-35748200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
46 | chr2:35747200-35747800 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
47 | chr2:35747200-35748000 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
48 | chr2:35747600-35748000 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
49 | chr2:35747800-35748200 | Flanking Active TSS | ES-I3 Cell Line | embryonic stem cell |
50 | chr2:35747800-35748400 | Enhancers | HUES6 Cell Line | embryonic stem cell |