Variant report

Variant	nsv961670
Chromosome Location	chr2:34652313-34661910
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 96 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:96 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs559316065	chr2:34652449-34652450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs528504960	chr2:34652544-34652545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs75845535	chr2:34652553-34652554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs543150569	chr2:34652570-34652571	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs148968219	chr2:34652655-34652656	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs143760746	chr2:34652663-34652664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs570588358	chr2:34652677-34652678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs533253931	chr2:34652719-34652720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs151100545	chr2:34652731-34652732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs566783356	chr2:34652844-34652845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs535394234	chr2:34652870-34652871	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs189892848	chr2:34652890-34652891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs568940225	chr2:34652934-34652935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs370848312	chr2:34652936-34652937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs577021920	chr2:34653010-34653011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs537581037	chr2:34653046-34653047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs142048209	chr2:34653056-34653057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs543433428	chr2:34653086-34653087	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs577408561	chr2:34653089-34653090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs74331330	chr2:34653101-34653102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs62163259	chr2:34653103-34653104	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs10205828	chr2:34653128-34653129	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs540112875	chr2:34653134-34653135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs145896159	chr2:34653143-34653144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs573202290	chr2:34653179-34653180	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs370722228	chr2:34653191-34653192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs113546231	chr2:34653194-34653195	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs561761509	chr2:34653205-34653206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs373922534	chr2:34653210-34653211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs6742806	chr2:34653222-34653223	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs114462428	chr2:34653223-34653224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs564297687	chr2:34653238-34653239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs529042767	chr2:34653290-34653291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs184509645	chr2:34653300-34653301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs116057671	chr2:34653323-34653324	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs13426967	chr2:34653324-34653325	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs57898532	chr2:34653329-34653330	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs188860913	chr2:34653335-34653336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs577590231	chr2:34653375-34653376	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs142703844	chr2:34653394-34653395	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs72868044	chr2:34653395-34653396	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs181410605	chr2:34653425-34653426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs186347417	chr2:34653427-34653428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs116241851	chr2:34653446-34653447	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs553172082	chr2:34653464-34653465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs573165480	chr2:34653504-34653505	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs550990345	chr2:34653517-34653518	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs535779036	chr2:34653523-34653524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs552296029	chr2:34653548-34653549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs150364316	chr2:34653552-34653553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Breast cancer	17393978	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Bladder cancer	21909424	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	19521722	CNVD
Autism	18522746	CNVD
Breast cancer	21364760	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	18927303	CNVD
Hereditary gingival fibromatosis	19633868	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
Neurocytoma	17123091	CNVD
Autism	22495309	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:34652400-34654400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr2:34659600-34660200	Enhancers	Gastric	stomach

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