Variant report

Variant nsv961914
Chromosome Location chr2:178481282-178483895
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:340 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178462800-178482800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr2:178464200-178482600 Weak transcription Psoas Muscle Psoas
3 chr2:178464200-178482600 Weak transcription Stomach Smooth Muscle stomach
4 chr2:178464600-178482400 Weak transcription Colon Smooth Muscle Colon
5 chr2:178468400-178482800 Weak transcription Fetal Brain Male brain
6 chr2:178471800-178482600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr2:178476400-178482800 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr2:178476800-178482600 Weak transcription HepG2 liver
9 chr2:178477400-178482600 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr2:178477600-178482600 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr2:178477800-178482400 Weak transcription Brain Substantia Nigra brain
12 chr2:178477800-178482800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr2:178477800-178482800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr2:178479600-178482600 Weak transcription HSMM muscle
15 chr2:178480000-178482600 Weak transcription K562 blood
16 chr2:178480000-178482800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr2:178480800-178481800 Enhancers Pancreatic Islets Pancreatic Islet
18 chr2:178481000-178481400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:178481000-178481400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
20 chr2:178481000-178481400 Active TSS Fetal Lung lung
21 chr2:178481000-178481600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr2:178481000-178481600 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr2:178481000-178481600 ZNF genes & repeats Fetal Kidney kidney
24 chr2:178481200-178481400 Enhancers Skeletal Muscle Female skeletal muscle
25 chr2:178481200-178482200 Weak transcription Right Ventricle heart
26 chr2:178481200-178482600 Weak transcription Brain Angular Gyrus brain
27 chr2:178481200-178482600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr2:178481200-178482600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr2:178481200-178482600 Weak transcription Left Ventricle heart
30 chr2:178481200-178482600 Weak transcription Ovary ovary
31 chr2:178481200-178482600 Weak transcription Pancreas Pancrea
32 chr2:178481200-178482600 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr2:178481200-178482600 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr2:178481200-178482800 Weak transcription Gastric stomach
35 chr2:178481200-178482800 Weak transcription Right Atrium heart
36 chr2:178481200-178482800 Weak transcription GM12878-XiMat blood
37 chr2:178481400-178481600 Enhancers Fetal Heart heart
38 chr2:178481400-178482600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr2:178481400-178482600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr2:178481400-178482600 Weak transcription Fetal Lung lung
41 chr2:178481400-178482600 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr2:178481600-178482200 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr2:178481600-178482600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:178481600-178482600 Weak transcription Fetal Heart heart
45 chr2:178481600-178482800 Weak transcription Fetal Kidney kidney
46 chr2:178481800-178482800 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr2:178482200-178482600 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr2:178482200-178482800 Enhancers Right Ventricle heart
49 chr2:178482400-178482600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr2:178482400-178482600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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