Variant report

Variant	nsv962236
Chromosome Location	chr17:45472087-45501749
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:133)
CpG islands
(count:244)
Chromatin interactive
region (count:11)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:133 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr17:45493445-45493683	A549	lung:	n/a	chr17:45493564-45493575
2	CEBPB	chr17:45482340-45482579	IMR90	lung:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
3	CEBPB	chr17:45491776-45491931	K562	blood:	n/a	n/a
4	CEBPB	chr17:45493468-45493688	K562	blood:	n/a	chr17:45493564-45493575
5	CEBPB	chr17:45493466-45493668	HepG2	liver:	n/a	chr17:45493564-45493575
6	CEBPB	chr17:45482271-45482609	K562	blood:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
7	CEBPB	chr17:45482316-45482557	A549	lung:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
8	CEBPB	chr17:45482269-45482596	HepG2	liver:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
9	CTCF	chr17:45480700-45480850	AG09309	skin:	n/a	n/a
10	CTCF	chr17:45501099-45501153	A549	lung:	n/a	n/a
11	CTCF	chr17:45501124-45501145	GM12891	blood:	n/a	n/a
12	CTCF	chr17:45500839-45500928	MCF-7	breast:	n/a	n/a
13	CTCF	chr17:45480760-45480910	HCT-116	colon:	n/a	n/a
14	CTCF	chr17:45495359-45495387	Spleen_OC	spleen:	n/a	n/a
15	CTCF	chr17:45480760-45480910	A549	lung:	n/a	n/a
16	CTCF	chr17:45501099-45501101	GM12891	blood:	n/a	n/a
17	CTCF	chr17:45501040-45501190	GM12874	blood:	n/a	n/a
18	CTCF	chr17:45501075-45501150	H1-hESC	embryonic stem cell:	n/a	n/a
19	CTCF	chr17:45480700-45480850	HCT-116	colon:	n/a	n/a
20	CTCF	chr17:45480860-45481010	HCT-116	colon:	n/a	n/a
21	CTCF	chr17:45491577-45491639	Fibrobl	skin:	n/a	n/a
22	CTCF	chr17:45501637-45501674	Kidney_OC	kidney:	n/a	n/a
23	CTCF	chr17:45500980-45501130	GM12865	blood:	n/a	n/a
24	CTCF	chr17:45501060-45501210	GM12872	blood:	n/a	n/a
25	CTCF	chr17:45482723-45482749	GM10248	blood:	n/a	n/a
26	CTCF	chr17:45501240-45501390	HUVEC	blood vessel:	n/a	n/a
27	CTCF	chr17:45501040-45501190	GM12868	blood:	n/a	n/a
28	CTCF	chr17:45480800-45480950	NHDF-neo	bronchial:	n/a	n/a
29	CTCF	chr17:45500854-45500948	MCF-7	breast:	n/a	n/a
30	CTCF	chr17:45480680-45480830	HPAF	blood vessel:	n/a	n/a
31	CTCF	chr17:45501140-45501290	HEK293	kidney:	n/a	n/a
32	CTCF	chr17:45501146-45501167	GM12891	blood:	n/a	n/a
33	CTCF	chr17:45501060-45501210	GM12871	blood:	n/a	n/a
34	CTCF	chr17:45501084-45501184	MCF-7	breast:	n/a	n/a
35	CTCF	chr17:45501628-45501635	Kidney_OC	kidney:	n/a	n/a
36	CTCF	chr17:45501180-45501330	SAEC	small airway:	n/a	n/a
37	CTCF	chr17:45480800-45480950	AG09319	gingival:	n/a	n/a
38	CUX1	chr17:45490875-45491044	GM12878	blood:	n/a	n/a
39	CUX1	chr17:45477260-45477262	GM12878	blood:	n/a	n/a
40	E2F4	chr17:45482292-45482492	MCF10A-Er-Src	breast:	n/a	n/a
41	E2F6	chr17:45500802-45501058	H1-hESC	embryonic stem cell:	n/a	chr17:45501023-45501032
42	EBF1	chr17:45500733-45501013	GM12878	blood:	n/a	n/a
43	EP300	chr17:45492009-45492099	GM12878	blood:	n/a	n/a
44	FOXA1	chr17:45500763-45500919	T-47D	breast:	n/a	n/a
45	GABPA	chr17:45500842-45501252	H1-hESC	embryonic stem cell:	n/a	chr17:45501079-45501088 chr17:45501027-45501036 chr17:45501020-45501029 chr17:45500971-45500980
46	GABPA	chr17:45500782-45501494	H1-hESC	embryonic stem cell:	n/a	chr17:45501079-45501088 chr17:45501027-45501036 chr17:45501020-45501029 chr17:45500971-45500980
47	GATA2	chr17:45475909-45476156	K562	blood:	n/a	n/a
48	GATA3	chr17:45484716-45485115	SH-SY5Y	brain:	n/a	n/a
49	GATA3	chr17:45477589-45477864	SH-SY5Y	brain:	n/a	n/a
50	GATA3	chr17:45472581-45472767	SH-SY5Y	brain:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:45501030-45501080	MCF10A-Er-Src	breast:	n/a
2	chr17:45501030-45501080	HCPEpiC	choroid plexus:	n/a
3	chr17:45501030-45501080	GM12892	blood:	n/a
4	chr17:45501242-45501292	SK-N-SH	brain:	n/a
5	chr17:45501030-45501080	HCT-116	colon:	n/a
6	chr17:45501242-45501292	ProgFib	skin:	n/a
7	chr17:45501242-45501292	ECC-1	luminal epithelium:	n/a
8	chr17:45501628-45501678	NT2-D1	testis:	n/a
9	chr17:45501628-45501678	HUVEC	blood vessel:	n/a
10	chr17:45501697-45501747	SK-N-MC	brain:	n/a
11	chr17:45501030-45501080	SK-N-MC	brain:	n/a
12	chr17:45501030-45501080	HMEC	breast:	n/a
13	chr17:45501628-45501678	MCF10A-Er-Src	breast:	n/a
14	chr17:45501628-45501678	AG09309	skin:	n/a
15	chr17:45501242-45501292	BE2_C	brain:	n/a
16	chr17:45501697-45501747	U87	brain:	n/a
17	chr17:45501242-45501292	Hela-S3	cervix:	n/a
18	chr17:45501628-45501678	PANC-1	pancreas:	n/a
19	chr17:45501242-45501292	HRPEpiC	eye:	n/a
20	chr17:45501030-45501080	HepG2	liver:	n/a
21	chr17:45501242-45501292	NB4	blood:	n/a
22	chr17:45501697-45501747	CMK	blood:	n/a
23	chr17:45501242-45501292	Jurkat	blood:	n/a
24	chr17:45501697-45501747	SK-N-SH	brain:	n/a
25	chr17:45501628-45501678	AG04449	skin:	fetal
26	chr17:45501628-45501678	T-47D	breast:	n/a
27	chr17:45501030-45501080	HRE	kidney:	n/a
28	chr17:45501030-45501080	SAEC	small airway:	n/a
29	chr17:45501030-45501080	HPAEpiC	pulmonary alveolar:	n/a
30	chr17:45501030-45501080	ECC-1	luminal epithelium:	n/a
31	chr17:45501628-45501678	NHBE	bronchial:	n/a
32	chr17:45501697-45501747	HRPEpiC	eye:	n/a
33	chr17:45501628-45501678	HIPEpiC	eye:	n/a
34	chr17:45501628-45501678	SK-N-MC	brain:	n/a
35	chr17:45501628-45501678	Hepatocyte	liver:	n/a
36	chr17:45501628-45501678	HCT-116	colon:	n/a
37	chr17:45501030-45501080	HEEpiC	esophagus:	n/a
38	chr17:45501030-45501080	PFSK-1	brain:	n/a
39	chr17:45501242-45501292	SKMC	muscle:	n/a
40	chr17:45501030-45501080	H1-hESC	embryonic stem cell:	embryo
41	chr17:45501697-45501747	IMR90	lung:	fetal
42	chr17:45501628-45501678	SK-N-SH	brain:	n/a
43	chr17:45501628-45501678	NB4	blood:	n/a
44	chr17:45501242-45501292	HMEC	breast:	n/a
45	chr17:45501628-45501678	HEEpiC	esophagus:	n/a
46	chr17:45501697-45501747	BJ	skin:	n/a
47	chr17:45501628-45501678	GM12891	blood:	n/a
48	chr17:45501030-45501080	HEK293	kidney:	embryo
49	chr17:45501628-45501678	HAEpiC	amniotic membrane:	n/a
50	chr17:45501628-45501678	HRPEpiC	eye:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:45474211..45476724-chr17:45477326..45478919,2	MCF-7	breast:
2	chr17:45489885..45492541-chr17:45494163..45496455,2	MCF-7	breast:
3	chr17:45489885..45492541-chr17:45494163..45496455,2	MCF-7	breast:
4	chr17:45463722..45466707-chr17:45470914..45473396,3	K562	blood:
5	chr17:45469114..45472029-chr17:45476038..45478353,2	K562	blood:
6	chr17:45474211..45476724-chr17:45477326..45478919,2	MCF-7	breast:
7	chr17:45443966..45446911-chr17:45490626..45492639,2	K562	blood:
8	chr17:45468184..45470293-chr17:45471127..45473354,2	MCF-7	breast:
9	chr17:45443966..45446911-chr17:45490507..45492639,3	K562	blood:
10	chr17:45485568..45487998-chr17:45490186..45492096,2	K562	blood:
11	chr17:45485568..45487998-chr17:45490186..45492096,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC040934.1-1	chr17:45500728-45500892	ENSG00000253347.1
2	lnc-AC040934.1-1	chr17:45486688-45487035	ENSG00000253347.1

No data

Variant related genes	Relation type
ENSG00000253347	TF binding region
ENSG00000253347	CpG island

Extended variants
information (count: 1042 )
Associated
traits (count: 118 )

Variant overlapped rSNPs/rCNVs (count:1042 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs557137184	chr17:45472126-45472127	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs374607066	chr17:45472128-45472129	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs200643413	chr17:45472147-45472148	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs112106531	chr17:45472228-45472229	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs554571476	chr17:45472237-45472238	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs543523903	chr17:45472308-45472309	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs189901854	chr17:45472333-45472334	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs151014768	chr17:45472344-45472345	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs181874135	chr17:45472371-45472372	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs72829614	chr17:45472396-45472397	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs140821148	chr17:45472402-45472403	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs553071882	chr17:45472403-45472404	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs187314569	chr17:45472465-45472466	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs572965457	chr17:45472618-45472619	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs563111153	chr17:45472723-45472724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs561884384	chr17:45472733-45472734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs578227468	chr17:45472801-45472802	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs544621452	chr17:45472866-45472867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs191848014	chr17:45472874-45472875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs533597682	chr17:45473015-45473016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs547189549	chr17:45473084-45473085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs11869768	chr17:45473107-45473108	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs528155041	chr17:45473115-45473116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs548171784	chr17:45473137-45473138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs183615111	chr17:45473144-45473145	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs537035238	chr17:45473156-45473157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs377305472	chr17:45473161-45473162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs369451369	chr17:45473170-45473171	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs570384445	chr17:45473171-45473172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs376417370	chr17:45473182-45473183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs369507720	chr17:45473191-45473192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs199837501	chr17:45473194-45473195	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs147065442	chr17:45473225-45473226	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs74745378	chr17:45473229-45473230	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs138451034	chr17:45473241-45473242	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs17855599	chr17:45473247-45473248	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs187013941	chr17:45473264-45473265	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201179775	chr17:45473265-45473266	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs141056676	chr17:45473297-45473298	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs377512439	chr17:45473304-45473305	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs150251915	chr17:45473313-45473314	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs555824646	chr17:45473323-45473324	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs144853553	chr17:45473344-45473345	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs376326478	chr17:45473347-45473348	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs370264878	chr17:45473379-45473380	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs189930308	chr17:45473380-45473381	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs199753910	chr17:45473385-45473386	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs146014746	chr17:45473413-45473414	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs533633855	chr17:45473431-45473432	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs540840781	chr17:45473432-45473433	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:118)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Melanoma	18172304	CNVD
Moyamoya disease	22323933	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ovarian cancer	21781307	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell lymphomas	19863542	CNVD
Cancer	16751803	CNVD
Chordoma	21602918	CNVD
Neurofibromatosis	20686819	CNVD
Peripheral nerve sheath tumors	20686819	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	17897457	CNVD
Neuroblastoma	17327916	CNVD
Breast cancer	21264507	CNVD
Endometrial cancer	22040021	CNVD
Neuroblastoma	21484798	CNVD
Breast cancer	22028636	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute myeloid leukemia	20724749	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Gastric cancer	17167181	CNVD
Breast cancer	19287154	CNVD
Leukemia	20874852	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Neuroblastoma	18664255	CNVD
Neuroblastoma	17533364	CNVD
Human rectal carcinomas	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Breast cancer	17457667	CNVD
Breast cancer	16951389	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22048815	CNVD
Breast cancer	17603634	CNVD
Follicular lymphoma	20505157	CNVD
Non-small cell lung cancer	20864512	CNVD
Cancer	21183584	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	20953835	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
TAR Syndrome	17847015	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	17850661	CNVD
Breast cancer	19261255	CNVD
Lung cancer	16773561	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Basal-like breast cancer	18066063	CNVD
Breast cancer	20031965	CNVD
Colorectal cancer	19287155	CNVD
Hereditary breast	19566914	CNVD
Ovarian cancer	19047089	CNVD
Ovarian cancer	19566914	CNVD
Triple-negative breast cancer	18950515	CNVD
Breast cancer	16846527	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	21251322	CNVD
Ewing''s sarcoma	22429812	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	17142309	CNVD
Breast cancer	16397240	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	17217626	CNVD
Non-syndromic sensorineural hearing loss	21084979	CNVD
Autism	22817714	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Frontotemporal lobar degeneration	19640594	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21509527	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:330 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:45402200-45500800	Weak transcription	Aorta	Aorta
2	chr17:45461400-45500400	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr17:45461600-45475200	Weak transcription	Colon Smooth Muscle	Colon
4	chr17:45461600-45500600	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr17:45461600-45500600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr17:45463600-45473400	Weak transcription	Fetal Brain Male	brain
7	chr17:45463800-45477800	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr17:45464000-45481400	Weak transcription	Lung	lung
9	chr17:45464000-45487800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr17:45464200-45496800	Weak transcription	Fetal Intestine Small	intestine
11	chr17:45464400-45477000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr17:45464400-45493800	Weak transcription	Ovary	ovary
13	chr17:45465600-45496800	Weak transcription	Primary hematopoietic stem cells	blood
14	chr17:45465600-45500200	Weak transcription	Primary B cells from cord blood	blood
15	chr17:45466800-45499600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr17:45467000-45473200	Weak transcription	Primary B cells from peripheral blood	blood
17	chr17:45470400-45500400	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr17:45471800-45472600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr17:45472000-45474800	Weak transcription	NHDF-Ad	bronchial
20	chr17:45472200-45500600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr17:45472600-45481400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr17:45473200-45474200	Strong transcription	Primary B cells from peripheral blood	blood
23	chr17:45473400-45476600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr17:45474200-45481200	Weak transcription	Primary B cells from peripheral blood	blood
25	chr17:45476400-45476600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr17:45477200-45477400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr17:45477400-45478600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr17:45477400-45478600	Enhancers	Stomach Mucosa	stomach
29	chr17:45477800-45478200	Enhancers	Gastric	stomach
30	chr17:45477800-45478200	Enhancers	Sigmoid Colon	Sigmoid Colon
31	chr17:45478000-45478200	Enhancers	Pancreas	Pancrea
32	chr17:45478200-45480200	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr17:45478600-45480200	Weak transcription	Stomach Mucosa	stomach
34	chr17:45480200-45480400	Enhancers	Sigmoid Colon	Sigmoid Colon
35	chr17:45480200-45480400	Enhancers	Stomach Mucosa	stomach
36	chr17:45481200-45481800	Enhancers	Primary B cells from peripheral blood	blood
37	chr17:45481400-45482000	Enhancers	ES-I3 Cell Line	embryonic stem cell
38	chr17:45481400-45482400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr17:45481800-45492800	Weak transcription	Primary B cells from peripheral blood	blood
40	chr17:45482400-45483000	Enhancers	Fetal Heart	heart
41	chr17:45482400-45486800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr17:45484600-45489000	Weak transcription	Right Ventricle	heart
43	chr17:45484800-45500400	Weak transcription	Liver	Liver
44	chr17:45485800-45500400	Weak transcription	Primary T cells from cord blood	blood
45	chr17:45486800-45488200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr17:45487400-45488000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
47	chr17:45487800-45488200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr17:45488200-45491200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr17:45489400-45489600	Enhancers	iPS-20b Cell Line	embryonic stem cell
50	chr17:45489400-45489800	Enhancers	H1 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links