Variant report

Variant	nsv962692
Chromosome Location	chr21:15318728-15320179
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 90 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:90 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs181506038	chr21:15318738-15318739	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs375111096	chr21:15318744-15318745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs3965630	chr21:15318745-15318746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs186099704	chr21:15318746-15318747	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs34498923	chr21:15318749-15318750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs445828	chr21:15318769-15318770	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs190861468	chr21:15318778-15318779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs532054140	chr21:15318810-15318811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs552834843	chr21:15318814-15318815	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs4046531	chr21:15318839-15318840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs566273898	chr21:15318852-15318853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs117312665	chr21:15318854-15318855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs4046532	chr21:15318857-15318858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs4046533	chr21:15318859-15318860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs183532458	chr21:15318863-15318864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs34876682	chr21:15318882-15318883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs3119548	chr21:15318883-15318884	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs537495554	chr21:15318893-15318894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs140309847	chr21:15318898-15318899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs419810	chr21:15318908-15318909	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs187592936	chr21:15318919-15318920	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs137896871	chr21:15318920-15318921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs419837	chr21:15318936-15318937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs541332700	chr21:15318945-15318946	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs35721086	chr21:15318947-15318948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs191150005	chr21:15318956-15318957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs34074747	chr21:15319016-15319017	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs4046534	chr21:15319030-15319031	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs34130999	chr21:15319045-15319046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs3094828	chr21:15319062-15319063	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs4046536	chr21:15319093-15319094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs543107547	chr21:15319106-15319107	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs2822289	chr21:15319111-15319112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs4046537	chr21:15319114-15319115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs551921930	chr21:15319119-15319120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs34017291	chr21:15319127-15319128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs565687068	chr21:15319156-15319157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs2822290	chr21:15319185-15319186	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs3865373	chr21:15319205-15319206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs201170795	chr21:15319214-15319215	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs548902905	chr21:15319217-15319218	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs34536720	chr21:15319236-15319237	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs2334752	chr21:15319237-15319238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs568629812	chr21:15319248-15319249	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs188135883	chr21:15319269-15319270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs4046539	chr21:15319286-15319287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs35764120	chr21:15319289-15319290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs4046517	chr21:15319296-15319297	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs4046518	chr21:15319298-15319299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs143938305	chr21:15319324-15319325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Sudden cardiac death	19188705	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
T-cell lymphomas	19863542	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Metanephric adenoma	20802469	CNVD
Neuroblastoma	18923191	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	20409316	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute myeloid leukemia	21251322	CNVD
abnormal development	18461090	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Melanoma	17363583	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	18923514	CNVD
Alzheimer''s disease	20877625	CNVD
Follicular lymphoma	20505157	CNVD
Alzheimer''s disease	21956041	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15310400-15347400	Weak transcription	Dnd41	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links