Variant report

Variant nsv962988
Chromosome Location chr19:52099340-52106095
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52098400-52099400 Enhancers Primary monocytes fromperipheralblood blood
2 chr19:52098400-52101600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr19:52098400-52102000 Weak transcription Right Atrium heart
4 chr19:52098600-52099600 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr19:52098600-52099600 Enhancers Monocytes-CD14+_RO01746 blood
6 chr19:52098600-52101400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr19:52098600-52101800 Weak transcription Gastric stomach
8 chr19:52098600-52101800 Weak transcription Spleen Spleen
9 chr19:52098600-52105000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr19:52098600-52110400 Weak transcription Brain Cingulate Gyrus brain
11 chr19:52098800-52099400 Enhancers Pancreas Pancrea
12 chr19:52098800-52099600 Enhancers K562 blood
13 chr19:52098800-52099800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr19:52098800-52101800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr19:52098800-52110600 Weak transcription Brain Anterior Caudate brain
16 chr19:52099400-52110800 Weak transcription Pancreas Pancrea
17 chr19:52101000-52101200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr19:52101400-52102000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
19 chr19:52101600-52102200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
20 chr19:52101800-52102000 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
21 chr19:52101800-52102000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr19:52101800-52102000 Enhancers Placenta Placenta
23 chr19:52101800-52102000 Flanking Active TSS Gastric stomach
24 chr19:52101800-52102400 ZNF genes & repeats Spleen Spleen
25 chr19:52102000-52102200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
26 chr19:52102000-52102200 Active TSS Gastric stomach
27 chr19:52102000-52102400 Weak transcription Primary B cells from peripheral blood blood
28 chr19:52102200-52105400 Weak transcription Gastric stomach
29 chr19:52102400-52104200 Weak transcription Spleen Spleen
30 chr19:52102600-52103000 Enhancers GM12878-XiMat blood
31 chr19:52102600-52104200 Enhancers Primary B cells from peripheral blood blood
32 chr19:52103000-52103400 Active TSS GM12878-XiMat blood
33 chr19:52103400-52104600 Flanking Active TSS GM12878-XiMat blood
34 chr19:52104000-52104200 Bivalent Enhancer Primary B cells from cord blood blood
35 chr19:52104000-52104200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
36 chr19:52104000-52104200 Enhancers Sigmoid Colon Sigmoid Colon
37 chr19:52104000-52104400 Active TSS Rectal Mucosa Donor 29 rectum
38 chr19:52104000-52104600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr19:52104000-52104800 Bivalent Enhancer Primary T cells fromperipheralblood blood
40 chr19:52104000-52105000 Bivalent Enhancer Primary hematopoietic stem cells blood
41 chr19:52104000-52105800 Active TSS Duodenum Mucosa Duodenum
42 chr19:52104200-52104400 Flanking Active TSS Primary B cells from cord blood blood
43 chr19:52104200-52104400 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
44 chr19:52104200-52104400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
45 chr19:52104200-52104400 Bivalent Enhancer Fetal Muscle Trunk muscle
46 chr19:52104200-52104400 Bivalent Enhancer Fetal Thymus thymus
47 chr19:52104200-52104400 Bivalent/Poised TSS Small Intestine intestine
48 chr19:52104200-52104600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
49 chr19:52104200-52104600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
50 chr19:52104200-52104600 Flanking Active TSS Primary B cells from peripheral blood blood

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