Variant report

Variant nsv963045
Chromosome Location chr19:39280546-39283148
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:169 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39265600-39283000 Weak transcription Spleen Spleen
2 chr19:39276200-39283000 Weak transcription Pancreas Pancrea
3 chr19:39277200-39283200 Weak transcription NH-A brain
4 chr19:39277800-39282800 Weak transcription Placenta Placenta
5 chr19:39277800-39283000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr19:39277800-39283000 Weak transcription Right Ventricle heart
7 chr19:39278000-39283000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr19:39279000-39283400 Weak transcription HSMM muscle
9 chr19:39279400-39283400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr19:39279600-39280800 Weak transcription Esophagus oesophagus
11 chr19:39279600-39281400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr19:39279600-39281800 Weak transcription Fetal Intestine Large intestine
13 chr19:39279600-39281800 Weak transcription Fetal Intestine Small intestine
14 chr19:39279600-39281800 Weak transcription Fetal Thymus thymus
15 chr19:39279600-39282800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr19:39279600-39282800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr19:39279600-39283000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr19:39279600-39283000 Weak transcription Placenta Amnion Placenta Amnion
19 chr19:39279600-39283200 Weak transcription HepG2 liver
20 chr19:39279600-39283400 Weak transcription A549 lung
21 chr19:39279800-39280800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr19:39279800-39280800 Weak transcription NHEK skin
23 chr19:39279800-39281800 Weak transcription Fetal Muscle Trunk muscle
24 chr19:39279800-39282800 Weak transcription Fetal Muscle Leg muscle
25 chr19:39279800-39282800 Weak transcription HMEC breast
26 chr19:39279800-39283000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr19:39279800-39291600 Weak transcription Stomach Mucosa stomach
28 chr19:39280800-39281000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr19:39280800-39281000 Flanking Active TSS NHEK skin
30 chr19:39280800-39281600 Active TSS Esophagus oesophagus
31 chr19:39281000-39281400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr19:39281000-39281600 Active TSS NHEK skin
33 chr19:39281200-39282200 Active TSS iPS-20b Cell Line embryonic stem cell
34 chr19:39281400-39282200 Active TSS HUES6 Cell Line embryonic stem cell
35 chr19:39281400-39283000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr19:39281600-39283000 Weak transcription Esophagus oesophagus
37 chr19:39281600-39283000 Weak transcription NHEK skin
38 chr19:39281800-39282000 Enhancers Primary T helper cells PMA-I stimulated --
39 chr19:39281800-39282000 Enhancers Primary T killer naive cells fromperipheralblood blood
40 chr19:39281800-39282200 Active TSS HUES64 Cell Line embryonic stem cell
41 chr19:39281800-39282200 Active TSS Primary neutrophils fromperipheralblood blood
42 chr19:39281800-39282200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr19:39281800-39282200 Active TSS Brain Anterior Caudate brain
44 chr19:39281800-39282200 Active TSS Brain Cingulate Gyrus brain
45 chr19:39281800-39282200 Enhancers Colonic Mucosa Colon
46 chr19:39281800-39282200 Active TSS Colon Smooth Muscle Colon
47 chr19:39281800-39282200 Bivalent/Poised TSS Fetal Brain Female brain
48 chr19:39281800-39282200 Active TSS Fetal Muscle Trunk muscle
49 chr19:39281800-39282200 Active TSS Fetal Thymus thymus
50 chr19:39281800-39282200 Active TSS Rectal Smooth Muscle rectum

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